Epinephelus lanceolatus (giant grouper): 117259584
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Entry
117259584 CDS
T07331
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04270
Vascular smooth muscle contraction
ely04625
C-type lectin receptor signaling pathway
ely04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117259584 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117259584 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
117259584 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117259584 (arhgef12a)
Membrane trafficking [BR:
ely04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117259584 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
HEPN_AbiU2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
117259584
NCBI-ProteinID:
XP_033486888
LinkDB
All DBs
Position
9:27234644..27280555
Genome browser
AA seq
1441 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKTSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVSISSPNSPAA
ERPYSPLDRLSSTQPPWDENSSVCSQRVDMLQKMLSKEQQELQAMKEEYSRNPSPKLLKD
IQEAKKHIPQLQGQLFKATGATQEAVPGGDADDGSMFETEHTPSKGDNSTDLSWSSTPIS
RGFGPGSPENLYSRESSCPSPKSTPRNSFNSCHSPEGEDATDLDSLSPTTVSSPSSSRLV
SQIIGAEDDYFDSDQEQTNGQCNSFNSIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLYA
DFYKQTNSKETRRVFMDLHTFFIDRGANLKVAVPESISTDLDRRRTELIPEEINRQHVQT
LQDSLLPDIQKNLEDFRQKRSMGLTVAEVELARLDQERVRDRVTLERERSYAENIITKIE
DILLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTEKE
GEEKVKKPRFPSILGPQRRPSRIEAASVGKALDGRPRPQKQLSQPTLGASDHMEAGRLRG
SQSSEGSELTHSMSLNTSSPNSATYSSDTSRDTDMGGTPTSGPSRLSEGLQSDALDGLSY
PASHFDLYSLDQLQEDDRESDRVHEGTPKAIRRLEGLGATDVQSEDDQGTDSEHDPPNWQ
QLVGREVLAGLRPQEIKRQEVINELFYTERAHVRMLRVLDHIFYQKLSKEAILPPADIKN
IFTNLEEILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFSGGEEEKIKQAVGTFCSN
QPFALEIIKSKQKKDSRFTSFIQEAESNRLCRRLQLKDIIPVEMLRLTKYPLLLDNIAKY
TDNVAEKDKVKQAADCCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNAMILEL
KNLDLTKRTMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTA
DTKQIFSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAPTVSDQRTWQRLITQR
ADAMKVKPHSVIPLPQTDGERDGVEIITAGVSRLSRDPDRTSTGSTQSTDKESSPAPRSV
TQSSLPGNNPFEGVKAEEEEEEEGFVDPEPPYQVAEDGKEGDSFNMFPSRADEALKTLAA
LKQVLVTQLMSQEAVEQTKRSTGARLLRTTSLRTPVDSRARVMVHNGSEKNSSQTEDPTQ
DLGSGDTGFFDSPEDYAGYLVLEGYGGPGESSTDDDILASTTGKQLRTSQGCAADSGINL
RFSSTSQAGSLSSFSRQVLSHLRNLQANLNYLKEVEAKYNNLIRQRPERPAADTDGSKDK
R
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccatcccccagacaagaaacccaaaagtgataaaacctcactt
ccctccaatgagtttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaggggaagcctgagtcctgtggtctggtccagcgatgtgtaatcatccag
aaagatgaaaatggctttgggctcactgtcagtggtgacaacccagtgtttgtgcagctt
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagacagaatcatcaag
gttaacgggacccttgttacacattctaatcacattgaggtggtgaagcttatcaaatcg
ggctcctatgtggccctcacagtgttggggcggcctccagggctcgcccagatccctttg
tctgaagcagagtctgaaatgttgggtgttagcatttcatcacctaactccccagcagca
gaacgcccctacagtcccctggaccgactctcttccacacaaccaccatgggatgagaat
agcagtgtctgcagccagagggttgacatgttgcaaaagatgctctcaaaagagcagcag
gagctgcaggccatgaaggaggagtacagcaggaacccctcccccaaactactgaaagac
atccaggaagctaagaaacacattcctcagctgcagggtcagctcttcaaggccactggg
gcaacacaggaggctgttccaggtggtgatgcagatgatggtagcatgtttgagacagag
cacactccctctaagggagacaacagtacagacctgtcctggagcagcactcctatatct
cgtgggtttggacctggatctccagagaatctttactcaagagagtcatcctgccccagc
ccaaagagcacacccaggaacagcttcaactcctgccactctccagagggggaggacgcc
actgacctggactctctgtcccctaccacagtcagcagtccctcttcctcccgcctcgtc
tcacaaatcattggagctgaggacgactattttgattcagaccaggagcagacaaatggc
cagtgtaacagctttaacagtattgagcagctcaagtctcgtcctgcccacctcgcagca
ttccttcaccatgtcatctctcagttcgaccctgctcctgtgctgtgctacctctatgct
gacttctacaagcagaccaactccaaagagaccagacgggtgttcatggatctccacacc
ttcttcattgaccgtggagcgaatttaaaagttgctgttcctgaatccatctctactgat
ctcgaccggcggcggacagagctgatcccagaggaaataaacaggcaacatgtacaaaca
ctgcaggactctctgctccctgacatccagaagaacctggaggatttcaggcaaaagcgc
agtatgggcctaacggtggctgaagtagagctggccagactggaccaagagagagtcaga
gaccgtgtcactctggagcgagagcgctcttatgctgagaacatcatcaccaagatagag
gatatcctgttaacaactcagaccacagaggaagagaaatgcactacaatgcagtatgtc
atctatacatacatgaagcaccttggtgtgagggtcaaggaacctcgcagtctggagtcc
aaacgggtcaggatcaacttccttcccaagattaagaaaagcatcaagacagaaaaggaa
ggagaagagaaggtgaagaaacccagatttcccagtattcttggacctcagcgtcggccc
agccgcatcgaagcagcatcagtgggtaaagccttggatggtcgccccaggccgcagaaa
cagttgtctcagcccacactgggagcgagtgatcacatggaagctggtcgtctaagaggc
agccaatcgagcgagggctctgaactcacacactccatgtctctcaacacctcatcccca
aacagcgccacctatagctcggacacaagccgagacactgatatgggtgggactccaacc
tcaggcccttccaggctgagtgaaggccttcagtctgacgctcttgatgggctgtcatac
cctgcttcgcactttgacctttacagcctcgaccagctgcaagaggatgacagagaaagc
gacagagtccacgagggaacaccaaaggccataagaaggctcgagggactgggtgcaact
gatgtccagagtgaggacgaccagggaacagactccgagcatgaccctccaaactggcag
cagctggtggggcgagaggtcctagcaggtctcaggcctcaggaaatcaagagacaggaa
gttattaacgagctgttctacacagagcgcgcacatgtacggatgctgagagttttggac
cacattttctatcagaagctctccaaagaggccatcctgcctcctgctgacattaagaac
atcttcactaacctggaggagatcctacagctgcatgtttcaatactggagcaaatggca
gccgttcggaagagaaatgagtcttcagtaattgatcagataggagacgacttgctctct
tggttcagcggtggagaggaggagaagatcaagcaggcagtggggacgttttgcagcaac
cagccttttgctctggagatcatcaagagcaagcagaagaaagactcgcggtttacttca
ttcatccaggaggcagagagcaacagactgtgtcgccgactgcagcttaaggacatcatt
cccgtagagatgctgcggctcaccaagtaccctctgctactagacaacattgccaagtac
acagacaacgtagcggagaaggacaaagtgaagcaggcagcagactgctgtagaaagatc
ctcaatcacgtcaaccaggctgtgaaggaatccgaggacaagcagaggttggaggactat
cagagaagattggacctctcctctctaaagcagacagacaacgccatgatcctggagcta
aagaacttggatctaaccaagagaacgatggtgcatgagggaccactgtcatggaaagtg
aacaaggacaagactattgagttgtacacactcctcctggaggacatcctggttctgctg
cagaaacaagacgagcgtctaatcctgaagtgtcacagtaaaaacctggcaggcactgca
gacaccaaacagatcttcagccccatcatcaaactcaatactgtgctggtgcgctctgtg
gccacagacaacaagtcctttttcgtcctatccatgtctgacaatggagcccagatctac
gagctgatggcacccacagtctcagatcagagaacgtggcagcgtctaatcacccagagg
gctgatgccatgaaagtgaaacctcacagcgtcatacctttacctcagactgatggggag
agagacggtgtggagatcatcacggcgggcgtttccaggctgagtcgagacccagaccgc
acatccaccggcagcacccagtccacagataaagagagcagtccagccccgcgaagtgtg
acgcagagttctctacctggtaacaatccctttgagggcgtaaaggcagaggaagaggag
gaggaggaaggtttcgtggacccagagcctccttaccaagtggctgaagatggcaaagaa
ggagactcgttcaacatgtttccctccagagcagacgaagcactgaaaacattggcagca
ttaaagcaggtgttggtgacccagctgatgtcccaggaggctgtcgagcaaaccaaacgc
tccacgggggcacgtctcctaaggaccacctctctgcggacccctgtagacagccgcgca
cgggtgatggtccataatggctcagagaagaacagctctcagaccgaggacccgactcag
gacctgggctctggggacacaggcttctttgattctcctgaagattatgcagggtattta
gtcctggagggttacggtggcccgggggagagcagcacagatgatgacatattggcatcg
accacagggaagcagctgaggacctcacaaggctgcgccgccgactctggcatcaacttg
aggttttcttcgacgtcacaggccggcagcctctcctcttttagcagacaggtcttgtct
caccttagaaaccttcaggccaacctcaactatctgaaggaggttgaggccaagtacaat
aatctaatacgccaaaggccggagaggccagcagcggacacggatggaagcaaagataag
agatag
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integrated database retrieval system
