Epinephelus lanceolatus (giant grouper): 117259600
Help
Entry
117259600 CDS
T07331
Name
(RefSeq) tripartite motif-containing protein 3-like isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117259600
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117259600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
TEN_NHL
zf-RING_5
zf-RING_2
Invasin_D3
zf-C3HC4_4
CRLF3_N
RING_XB3-XBAT31
zf-ANAPC11
FapA
FTR1_4HB
Mala_s_1-like
Beta-prop_IFT122_1st
Baculo_PEP_C
Apolipoprotein
Histidinol_dh
YtkA
ATP-synt_B
DUF8567
Fib_alpha
DUF7822
DUF7605
YkyA
OEP
Motif
Other DBs
NCBI-GeneID:
117259600
NCBI-ProteinID:
XP_033486927
LinkDB
All DBs
Position
4:17158165..17174793
Genome browser
AA seq
771 aa
AA seq
DB search
MSVTMAKRETGSTSPVVRQIDKQFLVCSICLDHYHNPKVLPCLHTFCERCLQNYIPPQSL
TLSCPVCRQTSILPEKGVAALQNNFFITNLMEVLQRDPECIRPEACNVLESASAATACQP
LSCPNHEGKVMEFYCESCETAMCLECTEGEHREHVTVPLRDVLEQHKSALKNQLDAVRNR
LPQLTAAIELVNEISKQLTERKNEAVTEISNTFDELEKALHQRKTALITEVENICSSKQK
VLQAQLTSLLQGKENIQSSCNFTEQALSHGSATEVLLVQKQMGERVSALARHTFPEQPHE
NGHLECQVETDGLRRSIQNLGVLITTGTVGHTSVATGEGLRHALVGQHTTVTVTTKDKDG
ELVKTGNAALRAEIFSADGACTEAEVVDNKNGTYEVGYTLRSEGEFTFSLLLYEQPVRGS
PFRLRAVKPSDVLQSPDDVKRRVKSPSGGGGHVRQKAVRRPSSMYSTTKKKENPIEDELI
YRVGTRGRDKGEFTNLQGISTSSNGRIVVADSNNQCIQVFSNDGQFKMRFGVRGRSPGQL
QRPTGVTVDMNGDIIVADYDNRWISIFSSDGKFKNKIGAGRLMGPKGVAVDKNGHIITVD
NKACCVFIFQSNGKLVTKFGARGTSDRHFAEKSGANIALEQKLSKSGPVFSPHFVAVNNK
NEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRI
QVFDSSGSFLSYINTSADPLYGPQGLALTSDGHVAVADSGNHCFKVYRYLQ
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcactatggcaaagcgtgagaccggcagcaccagccctgtggtcaggcagata
gacaagcagttcctggtctgcagcatttgtttggaccattatcacaaccctaaggtcctg
ccctgcctgcacaccttctgtgagagatgcctacagaactacatccctcctcagtctttg
acactgtcctgtccagtatgcagacagacctctatcttgccagagaaaggtgtggcagcc
ctgcagaacaatttcttcatcacaaacttaatggaggtgttacagcgagacccagagtgc
atccgacctgaggcctgtaatgttcttgagtcagcaagtgcagctacagcttgtcagccc
ctctcatgccccaaccatgagggcaaggtgatggagttttactgcgagtcatgtgaaact
gccatgtgtctggagtgcacagaaggagagcatagggaacatgtgacagttcctctgagg
gatgtgctagaacagcacaagtcagcgctaaaaaatcagctagacgctgtgcgcaacaga
ctacctcagctgacagccgccattgaacttgtgaatgagatctccaagcagcttactgag
cggaaaaatgaggcagttactgaaatcagtaacacttttgatgagctggagaaggcctta
caccaacgcaagactgctctcattactgaggtggaaaacatctgcagctccaagcagaag
gtgcttcaagcccagctgacctccttgcttcagggaaaagagaacattcaaagcagctgc
aacttcacagagcaggccctgagccatggcagtgccactgaggtcctgttggtacagaag
cagatgggtgagcgggtcagtgccctggcgcgacacacctttcccgaacagccccacgaa
aatggacatttggaatgccaggtagagacagatggactgaggcgctccattcagaacctg
ggagtcctgatcacaacagggactgtaggccatactagtgtcgccactggtgaaggcttg
cgacatgcactggtcgggcagcacaccactgtcacagtcactacgaaagacaaggatgga
gaactagtgaagactggtaatgctgctctgagggcagagattttctctgcagatggagcg
tgcactgaagctgaggtggtggacaacaagaatggcacctatgaggttggatataccctc
cgctcagagggagaattcaccttctctttgctgctatatgaacagcctgtgagggggagt
ccattccgtttgcgtgccgtcaagccttcagatgtcctgcagtcaccagacgacgtgaag
agaagagtgaagtctccgagtggaggaggaggtcatgttcgacagaaggctgtacgcaga
ccctccagcatgtacagcaccaccaagaaaaaggaaaacccaatagaggatgagctgatc
tacagagtgggaacaagaggacgagataaaggagaattcactaatctacaaggcatctcc
acctccagcaatggaaggattgtggtggcagacagcaacaatcagtgtatacaggtattc
tcaaatgatggccagtttaagatgaggtttggggtcagaggtcgctcaccagggcagttg
cagcgccccacaggggtcacagtggacatgaatggtgacattattgtagctgattacgac
aacagatggattagcatcttctcctcagatggcaagttcaagaataaaattggtgctgga
agattgatgggacccaaaggtgtggctgtggataagaatggacatatcatcacagttgat
aataaggcatgctgtgtcttcattttccaatcaaatgggaagctggtgacaaagtttgga
gccaggggaacatcagacagacactttgcagaaaaaagtggtgcaaacattgcactggaa
caaaagcttagtaaatctggccctgttttcagtcctcactttgtggccgtaaataacaaa
aatgagattgtggttactgactttcataaccattcagtcaaggtgtacaatgcagatgga
gagttcctgtttaaatttggctcccatggggaggggaacggccagttcaatgctccaaca
ggcgtggctgtggatgccaatggaaatatcattgttgccgattggggcaacagtcggatc
caggtgtttgacagctcagggtccttcctgtcctacatcaatacatcagcggaccccctt
tatggcccccagggcctggccctcacatctgatggtcatgtggcagtggcagattctggg
aaccactgcttcaaggtctaccgctacctgcagtag
DBGET
integrated database retrieval system
