Epinephelus lanceolatus (giant grouper): 117259620
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Entry
117259620 CDS
T07331
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117259620 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117259620 (robo1)
Cell adhesion molecules [BR:
ely04515
]
Immunoglobulin superfamily
ROBO family
117259620 (robo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_VEGFR-1-like_5th
C2-set_2
Pur_ac_phosph_N
Ig_5
FN3_DSCAM-DSCAML_C
Ig_C17orf99
Ig_PDGFR_d4
Unc5_NetrinR_N
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
117259620
NCBI-ProteinID:
XP_033486974
LinkDB
All DBs
Position
4:complement(18532722..18798797)
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AA seq
1704 aa
AA seq
DB search
MRIGCLLVVLFAMLVMLGVPKDHKGPLGTHRHAGIQKSHWCKRLPNNFGLHQNHQTSRHS
HNKPHKCKQVFHRSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDG
ERVETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEV
AILRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGTNIDDRDERITIRGGKL
MITNARKTDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPGSQVVLVDQSVEFRCEA
RGDPVPTVRWRKDDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVVENMVGKAEASATL
TVHVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRF
SVSQSGDLTITDAERSDMGYYSCQAINTAGSVLTKALLEVTDVVSDRPPPVIRQGPTNQT
VAVDGTVVLNCVATGNPTPTILWRKDGVLVSTHDSRVKQLDTGSLQIRYAKLGDTGTYTC
IASTPSGEASWKAYLEVHEFGVPVQPNRPTDPNLIPSAPSKPEVTDVTRTSVALSWRPNL
NAGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDP
SPITDAVKTQDIPPTSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRVQWTVEQQSQYIQ
GYKVMYRPSPEGLQRSEWAVFEVRTPGEDSAVVPQLRKGVTYEFKVRPFFNEFQGTDSDV
KIGKTLEEAPSAPPREVTVAESGDNGTAILVSWQPPPEEEQNGVVQEYKIWCLGNESRYH
INRTVDGSTLSVLIPSLAPGIRYSVEVAASTGAGPGVKSDITFFQLDASGRMTETVILEN
PLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFT
PTVAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSINCCTAGNGNSDS
NLATYSRPADCIANYNNQMENKQTNLMVPESGVYGDVDLSNKINEMKTFNSPNLKDGRFV
GPGGQPTPYATTQLIQSSIMGNNVNSDRGTGGSGGGLLGGGEMNEKHCWKPTSVQQQKQE
MGSQLQYNIMEQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNSSDRGSSSTSGSQG
QKKGVRTPKLPKQSTMNWADLLPPPPANPPPSRSTEEYSLSMEKSCEPDMQCPMPPSHMY
LQPDELEEEEEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDAPDSHE
RRRHAVSPPPPPRPLSPSHTYGYITSPLALDTDGMEEEEDILEEEEEEGDETDAEVAKMH
YHHTHPHTHPHHPQMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVSSG
RSSAVSSSDGSFFTDADFAQAVAAAAEYSGLRVAKYPNTLGQDVGGASARKYQINPSGHR
PGSPVSTDSNMSMAVVHRRPPKKQKQHPAGHPGNQRRDAYNEDLPPPPIPPPAVLKSPTH
PSKAALEGRGVISPKAGEAGRDKRGGTVGYRPREGSDTRTSSSERKDAQERQKSAHGGKG
NKHEGSTANKARQHAGSEDIMPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRRRGEGGRRN
PADMGLNTTGAFQPGDEELEMVES
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgggtgtttgctggtggtgctgtttgccatgctggtcatgctgggagttcct
aaagaccataagggtccactcgggacccatcgccatgctgggatacagaagtctcactgg
tgcaaaaggctgcctaataattttggacttcaccagaaccaccagacttcgaggcactcc
cacaacaaaccacacaaatgcaagcaggtctttcacagatcccgtctgcgccaagaggat
actcctccccggattgtggagcacccatctgacctgattgtttccaaaggggagcccgcc
actctcaactgtaaagcagaggggcggccaaccccgacagtggagtggtacaaggatgga
gaacgtgtggaaacagacagggacaatccccgttctcagcgcatgcttcttcctagcggc
tccctcttctttctacgcatcgtccacggacgacggagcaagccggacgaaggttcctac
gtgtgtgttgcccgcaactacctgggagaggcagtaagccacaacgcctcactggaagta
gccattctacgtgatgacttcagacaaaaccctgcagatgtgatcgtggcagcaggagag
ccggcggtcctcgagtgtcagcctccacgtggacatcctgaacccaccatatcgtggaaa
aaagatggaactaacattgacgaccgagatgagagaatcactatacgcggagggaagctg
atgatcacaaacgcccggaagactgatgctgggaagtacgtgtgcgttggcacaaacatg
gtgggagaacgtgaaagtgaaatagctgaacttacagtgcttgagcgtcccagctttgtg
cgtcgcccaggcagccaggtggtgttagtagaccaaagtgtagagttcaggtgtgaggcc
cgtggcgacccagttcccaccgtgcgctggaggaaagacgacggtgacctgcctaaagga
aggtatgagattcgtgaggaccacaccctgaagatccgtcgtctgacctctgctgatgta
ggctcctacacctgcgtggtagagaacatggtgggcaaggcggaagcatcggccacgctc
accgtccacgtgcccccggcatttgtggtcagaccaaggaaccaggtggttggggttggc
agaaccgtcaccttccagtgcgaggcaactggaaacccacagccagccattttctggcag
cgggaaggcagtcagaacctgttgttctcctaccaacctcctcaaccctcctctagattt
tctgtatctcagtctggggaccttaccatcactgatgctgaacgctcagacatgggatac
tacagctgccaggctatcaacactgctggcagtgtcctcaccaaggctctgctagaggtc
actgatgttgtgtcagaccgcccgccaccggttatccgacagggccctaccaatcagacg
gtggctgtggacggcacagtggtcctcaactgtgtggcaacaggaaaccccacccccacc
atcctgtggaggaaggatggtgtcctggtgtccacacatgactccagggtgaaacagctg
gacacaggctcactgcagatacgctatgcaaagcttggtgacactggtacctatacctgc
atcgcctccacgcccagcggagaggcctcgtggaaagcctacttagaggtccacgaattt
ggagtcccagtccagccaaacagacctactgacccaaacttgatccccagtgcgccttcc
aaacctgaggtcactgacgttacccgcacctccgtcgccctttcctggagacctaacctt
aatgctggagccacacccacctcctatataatagaggccttcagtcatgcatcagggagc
agctggcagaccttggcagagcatgtgaaaactgagtcatttgtactgaagggcttgaag
cccagtgcagtctacctcttcttagtacgggcagccaatgcctatgggctgagtgatccc
agccctataactgatgctgtgaaaacacaagatatccctccaaccagtcagggtgtggac
caccgtcagatccaaagggagttgggagaagtggtcatccacctgcacaaccccactatt
ctctcctcctcatcagtcagggtgcagtggacagtggagcagcagtcgcagtacatccag
ggctacaaggtgatgtataggccttcaccggaggggctgcagaggagcgaatgggctgtg
ttcgaggtgcgcacccctggggaggacagcgccgttgtgccgcagcttcggaagggagtc
acatacgaattcaaagtccgccccttcttcaatgaattccagggaacagacagtgatgtc
aaaattggcaagacgctggaggaagcccccagtgcccctcctcgtgaggttacagtggcg
gaaagcggggacaatgggactgccatcctggtctcctggcaaccccctccagaagaggag
cagaatggggtggtccaggagtacaagatttggtgcttggggaatgagagcaggtaccac
atcaaccgtacagttgacggctcaaccttatccgtgctgattcccagcctggccccgggg
atccgctacagcgtggaggtagcagccagcactggggcgggtcccggggtcaagagcgat
atcaccttctttcagcttgatgcatccgggcgaatgacagagaccgtgatcctggagaac
cccctgtcccagcagatctcagatgtggtcaagcagccggcctttatagcaggcatcgga
gcagcttgttggatcatcctcatggtcttcagcatctggttgtacagacaccgcaagaag
aggaatggcctctccagcagctatgcgggcatacggaaggtgccgtcctttacattcaca
ccaacagtggcctatcagagaggaggagaaggtgtaagcagtgctggaaggcctggtttg
ctaaacattggggaatctgccactcagccctggctggcagacacatggcccaactcttgc
tccaaccacaacgactgcagcatcaactgctgcactgcaggcaacggcaacagcgacagc
aacttagcaacatacagccgcccagccgactgcatcgccaattataacaaccagatggaa
aacaagcagaccaacctcatggtgccagaatcaggcgtctatggagatgtagacttgtcc
aacaagatcaatgagatgaagaccttcaacagcccgaacctaaaagatggccgttttgtg
ggtccagggggccagccgacgccgtacgccaccacccagctcatccagtcctccatcatg
ggcaacaacgttaactcagacagaggaactggagggagtggaggaggactcctaggtgga
ggggagatgaatgaaaaacactgctggaagcccacctcagtccagcagcagaaacaggaa
atgggctcccagctgcagtacaacatcatggagcaaaacaagctgaacaaggaccgctac
agaggaggtgacagcccaatgccagccaccatcccctacaaccagacccatgacagccac
actggaggctcctacaacagctctgaccgaggcagcagtagtacctctgggagtcagggt
cagaagaagggagtacgcacccccaaactacccaaacagagcacaatgaattgggctgac
cttctgccccctccccctgcaaacccacccccaagtcggagcacagaggagtactctcta
tccatggaaaaaagctgtgaaccagacatgcagtgccccatgcccccctcccacatgtac
ctgcagcctgatgagctggaggaggaagaggagatggagagggggcccactcctcccatc
cgaggggcagcctcttcccccgcagctgtatcttacagtcaccagtccacagccactctc
acaccctcaccccaggaggagatgcagccgatgctccaagatgcacccgacagccatgaa
cgcaggcgccacgctgtgagccccccaccccctccaaggcccctctccccttcacacaca
tatgggtacatcaccagcccattggccttggacactgacggtatggaggaggaggaggat
attttggaggaagaggaggaggaaggtgacgagacagatgcagaggtggccaagatgcac
taccaccacactcacccccacacacacccccaccatccccagatgcatccgcgaaggttg
ctgctacgagggctcgaacagacgcccgcgtccagcatgggcgacctggagagctcggtg
accggctccatgatcaacggatgggggtcggcttctgaagaggataatgtctcttcaggg
aggtccagtgccgtcagctcatcagatggatccttcttcactgatgctgactttgctcaa
gcggttgccgcagcggcagagtattcaggcctcagggtggccaaatatcccaacacactg
ggccaagacgtcggaggagcttcagcgcgaaaataccaaataaacccgtcaggccaccgt
cctggcagcccggtgtctacagacagtaacatgagtatggcagttgtacacaggaggcct
cccaagaagcagaaacagcatcctgcaggtcatccagggaaccagcgacgtgatgcctac
aatgaagatctcccccctcctcctatcccacctccagcagtgcttaagtcgcctacacat
ccctccaaggcagccctggagggccggggagtgatttcccccaaagcaggtgaggcaggc
cgagacaagagaggagggacagtgggctatcggcccagagagggctcggacaccagaacc
agctcgtctgaacgcaaagacgctcaggagagacaaaagagtgcccatggagggaaaggg
aataaacatgagggtagcactgccaacaaggcacgccaacacgcaggttcagaggacatt
atgccctatagccgaccacagttccccacagtcaacagccctcgagacccaagctcctcc
agctccatgtcctctaggggttcagggggccggcggagaggagaaggaggccgcagaaac
cctgcagacatgggcctcaacaccacgggggccttccaaccaggagatgaagagctagag
atggtagaaagctga
DBGET
integrated database retrieval system