Epinephelus lanceolatus (giant grouper): 117259632
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Entry
117259632 CDS
T07331
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04136
Autophagy - other
ely04140
Autophagy - animal
ely04145
Phagocytosis
ely04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
117259632 (atg16l1)
04140 Autophagy - animal
117259632 (atg16l1)
04136 Autophagy - other
117259632 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117259632 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117259632 (atg16l1)
03029 Mitochondrial biogenesis [BR:
ely03029
]
117259632 (atg16l1)
Membrane trafficking [BR:
ely04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117259632 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
117259632 (atg16l1)
Mitochondrial biogenesis [BR:
ely03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117259632 (atg16l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
ATG16
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
EIF3I
Beta-prop_TEP1_2nd
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_VPS8
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_NOL10_N
Tricorn_2nd
eIF2A
CFAP251_N
WD40_RFWD3
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_SPT8
PUMA_CC
Beta-prop_DCAF12
FKBP15
AP5B1_middle
ADIP
Uso1_p115_C
NET2A
CNN1_N
CC_Bre1
6BHPP
DUF7310
Motif
Other DBs
NCBI-GeneID:
117259632
NCBI-ProteinID:
XP_033487013
LinkDB
All DBs
Position
4:complement(49645201..49681338)
Genome browser
AA seq
621 aa
AA seq
DB search
MAERRAECTWKRHISDQLKLRDRVQRQAFEEIVLQYNRLLEKSDLQAVLSERYQTDKYDI
QRGHETSSAADWSRSDALQQEMSQMRIKHQEELTELHKKRGELAQSVIELNNQIQQKDKE
IQSNEAKMMEYQQQISSLEGECRELRSYLQDLERANQTLKDEYDALQITFSALEEKLRKT
TEDNQELVSRWMAEKAQEANKLNAENEKDSRRRQAKLQKELADAAKEPLPIDPDDDIEVL
AEDGGKGGGETSPNRALSRTPSKKMSQPPPGGLLDSISNIFGVSECVQPGLVPPLSSRRR
TANSFSTSPENTEAPSGVCAEVRVPSTALHVFEAHDGEVNAVRFSPGSRLLATGGMDRRV
KLWEVVAGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTG
HSGKVLSARFLLDNTRIVSGSYDRTLKLWDLRNKVCTKTVFAGSSCNDIVCTEQCVMSGH
FDKKVRFWDIRAESIVKELELLGRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTF
SAQGFKCGADWTRVTFSPDGSYVAGGSADGALYIWNVVTGKVDRTLDRNHNSAINSVSWS
PSGAYVASVEKGSKAILWSDM
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgacgggcggagtgcacgtggaagagacacatctcagaccagctgaagctc
agagaccgagtccagagacaggcctttgaggagatcgtcctccagtataaccgtctcctg
gagaagtccgacctgcaggctgttctttcagagagataccagacggacaagtatgacatc
cagagaggacacgagaccagctcggcggcagactggagccgcagcgacgcgctgcagcag
gaaatgtctcagatgagaatcaaacaccaggaggaactgacggagctgcacaagaaacga
ggagagctggctcagagtgtgatcgaactcaacaaccagatccaacagaaggacaaagag
atccagagcaatgaagccaaaatgatggagtaccagcagcagatctcaagtctggaggga
gagtgccgagagctgaggagctacctgcaggacctggagagggccaaccagacgctgaag
gatgagtacgacgctctgcagatcaccttctctgctctggaggagaaactgaggaagacc
accgaggacaaccaggagctggtgtcccgctggatggcagagaaggctcaggaggccaac
aagctcaacgccgagaacgagaaggacagcagacgcagacaggctaagctgcagaaggaa
ctggccgatgccgccaaagagcctctgcccatcgacccggacgatgacattgaggtcctg
gcagaggatggagggaagggcggcggagagacctcacccaacagggcactcagcaggact
cccagtaagaagatgtcccagcctcctcctggtggtctcttggactccatctccaacatc
tttggcgtgtctgagtgtgtccagcctggactcgtcccaccactctccagcaggcgtcga
acagccaactccttcagcacgtcacctgaaaacactgaggccccctcaggagtgtgtgcg
gaggttcgagtcccctcaacggctctccacgtgtttgaagctcacgacggtgaggtgaac
gcagtgaggttcagccccggctctcgtctcctagcaacgggagggatggaccgcagggtg
aagctgtgggaggtggtggctggtcgctgtgagcctaaaggagctctgactggcagtaac
gctggaatcaccagcattgagttcgacagcgctgggtcgtacctgctggcggcgtcaaac
gactttgccagtcgtatctggactgtggatgactacagactgaggcacaccttgacaggt
cacagcgggaaggtgctgtcagctcgattcctattggacaacactcgaatcgtctccggg
agctacgatcgaacactcaaactgtgggaccttcgcaacaaagtctgtaccaagacggtg
ttcgctggttccagctgtaatgacatcgtgtgcacggagcagtgcgtcatgagcggacac
tttgacaagaaagttcgattctgggacatcagagcggagagtatagtgaaggaactggag
ctgctgggcagagtcacatctctggacctgaaccacgaccgcaccgagctgctcacctgc
tctagagatgacctggtgaagatcatcgacctgcgcaccaacgccgtcagacagaccttc
agtgctcagggtttcaagtgtggagccgactggaccagagtcaccttcagtcctgatggc
agctacgtggccggaggatcagctgacggagctctgtacatctggaatgttgtgacgggg
aaagtggaccggactctggaccggaaccataactctgccatcaactcagtgtcgtggtcg
ccgtcgggagcatacgtcgccagtgtggagaaaggcagcaaggccatcctgtggtcggac
atgtga
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