Epinephelus lanceolatus (giant grouper): 117259689
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Entry
117259689 CDS
T07331
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117259689 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117259689 (prpf8)
Spliceosome [BR:
ely03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117259689 (prpf8)
Complex C
U5 SnRNP specific factors
117259689 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
117259689
NCBI-ProteinID:
XP_033487189
LinkDB
All DBs
Position
4:29220357..29237167
Genome browser
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPAGLPPGVPPPVPVPDYMSEEKLQEKARKWQQLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDSEEDSSVAEWFYEHQPLKDTAKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
PTESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaccttcccctacagaggggtccctgcagggttgccaccaggtgtcccccct
cctgtgcccgtcccagactacatgtctgaggaaaagctgcaggagaaagcaagaaaatgg
cagcaattgcaggcaaagcgctactcagaaaagaggaagtttggctttgtggatgctcag
aaagaagacatgccacctgagcatgtccgcaagatcatcagggaccatggagacatgacc
aacagaaagtttcgccatgacaagagggtgtacctcggtgccctcaagtacatgccccac
gccgtactgaagctgctggaaaacatgcccatgccctgggaacagatcagagacgtgccc
gtcctctaccacatcactggagctatttcctttgtgaatgaaattccctgggttatagag
cctgtctacattgcccagtggggcactatgtggatcatgatgcgacgtgagaagcgtgat
cgtcggcacttcaagcggatgcgttttccaccatttgatgatgaggagccgccgctggac
tacgctgacaacatccttgatgtggagccactggaggccatccagatggagcttgactct
gaggaggactcttcagttgcagagtggttctatgagcaccaacccctcaaagacactgcc
aagtttgtgaatggcaccacctaccgtcgctggcagttcacactgcccatgatgtccaca
ctataccgcctggccaatcagctgctcaccgacctggtggatttcaattacttctaccta
tttgacctcaaggctttcttcacttccaaggctttgaatatggctattcctgggggacca
aagtttgagccactggtcagagacatcaacctccaggacgaagactggaatgagttcaat
gacatcaacaagatcatcatccggcagcctatcaggacagagtacaaaattgccttcccc
tacttgtacaacaacttgccgcaccatgtccacctcacctggtatcatacacccaacgtg
gtgtttatcaagacagaggatccagatctcccagcattctactttgacccactgatcaac
cccatttcacacagacactctgtcaagagtcaggagcccctgcctgatgacgatgaggaa
tttgagcttcctgagtatgtggagcccttcctcaaggagaccccactctacacagacaac
acagccaatggcatcgctctgctgtgggcgccaaggcccttcaacctcagatcaggccgc
acaaggcgtgccattgatatccccctgatcaagaactggtatcgtgagcactgccctgca
ggacagccggtgaaagtgcgtgtgtcataccagaaactgctcaagtactatgtgctgaat
gctctcaaacacagaccacccaaggcccagaagaagaggtatctgttccgctccttcaag
gccaccaagttctttcagtccaccaagctggattgggtggaggttggcctgcaggtttgc
cgacagggctacaacatgctcaatctgctcatccaccgtaagaacctgaactacctgcat
ctcgactacaacttcaacctgaagcctgtcaagacactgaccacaaaggaaagaaagaag
tcccgattcggtaacgcctttcacctgtgcagagaggtgctgcgtctcagcaagttggtg
gtggacagccacgtgcagtacagactgggaaatgttgatgccttccagttggctgatggg
ctgcagtacatcttcgctcatgtgggtcagctgacaggcatgtaccgctacaagtacaag
ctgatgagacaaatccgtatgtgcaaagatctaaagcatctcatctactaccggttcaac
actggtcctgtgggcaagggtccaggttgtggcttttgggctcccggctggagagtgtgg
ctgttcttcatgagggggatcactccgctgttggagaggtggctggggaatctgctggcc
aggcagtttgaaggacgtcactccaagggcgtagccaagactgtgaccaaacagcgtgtg
gagtctcactttgacctggagttgcgtgctgctgtgatgcacgacatcttggacatgatg
cctgagggcatcaaacagaacaaagccagaaccatcctgcagcacctcagcgagtcctgg
aggtgctggaaggccaacatcccctggaaggtgccaggcctgcccactcccattgagaac
atgatcttgcgctacgtgaaggctaaagctgactggtggaccaacactgcccactacaac
cgtgagagaatccgccgtggagccactgtggacaagacagtgtgtaagaagaacctgggg
agactgacccgtctgtacctgaaggctgagcaggagaggcagcacaactacctgaaggat
ggcccctacatcacagctgaagaggccgtggccatttacaccaccactgttcactggctg
gagagtcggcggttctcgcccatccccttccctccactgtcctacaaacacgacaccaag
ctgctgatcttggccttggagaggctcaaggaggcgtacagtgtgaagtctcgtctgaac
cagagtcagagggaggagctggggctgattgagcaggcgtacgacaatcctcacgaggcc
ttgtccaggatcaaacgtcacctgctcacccagagagccttcaaagaggttggtatcgag
ttcatggacttgtacagtcacctggtgcccgtgtatgatgtcgaacccctggagaagatc
accgacgcctaccttgaccagtacctgtggtacgaggcggacaagagacgtctcttccca
ccatggatcaaacctgctgacactgaaccaccaccactgctggtctacaagtggtgccaa
ggcatcaacaacctacaggacgtgtgggagactgctgagggagagtgcaacgtgatgctg
gagtcccgctacgagaagatgtatgagaagatcgatctgaccctgctcaacaggctgctg
cgtctcatcgttgaccacaacatcgctgattacatgacggccaaaaacaacgtggtcatc
aactacaaggatatgaaccacaccaactcctacggcatcatcagggggctccagtttgcc
tctttcatcgtacagtactacggcctggtgatggacctgctggtgctgggtctgcaccgt
gccagtgagatggccggcccacctcagatgcccaacgatttcctcagtttccaggacaca
cccacagagagcgcccacccaatcagactgtactgccgctacatcgaccgcatccacatc
ttcttcaggttctctgctgacgaggccagggatctgattcagaggtatctgacggagcat
ccagaccccaacaacgagaacatagtgggttacaacaacaagaagtgctggccccgcgat
gcccgcatgagactgatgaagcacgatgtcaaccttggacgtgctgtgttttgggacatc
aagaaccgcctgcccagatctgtgaccactgtccagtgggagaacagctttgtttctgtc
tacagcaaagacaaccccaacctgctcttcaacatgtgtggctttgagtgccgcatcttg
ccaaagtgccgcaccagctatgaggagtttactcataaggatggtgtgtggaacctgcag
aacgaggtaaccaaagagaggacagcgcagtgtttcttgcgtgtggatgatgaatcaatg
cagcgcttccacaacagagtgcgtcagatcctgatggcctctggatccaccacattcacc
aagattgtgaacaaatggaacacggctctgatcggtctgatgacgtacttccgtgaggct
gtggtcaacacccaggagctcctggacctgctggtgaagtgtgagaacaagatccagaca
cgtatcaagattggcctgaactccaaaatgcctagccgcttccctcctgtcgtcttctac
acacccaaagagctgggtggccttggcatgctgtccatgggccatgtgcttattccacag
tcagacctgcggtggtccaagcagacagatgtgggtatcacccacttcaggtctggaatg
agccacgaagaagaccagctgattcctaacctgtatcgttacatccagccatgggagagt
gagttcattgactcccagagggtctgggctgagtacgccctcaaaagacaggaggccatc
gcccagaacaggcgtctgacccttgaagatttggaggactcatgggacagaggaatccct
cgtatcaacacgcttttccagaaggacagacacacactggcctacgacaaaggctggaga
gtcaggacagatttcaaacagtaccaggtgctgaagcagaatccgttctggtggacccat
cagaggcacgatggcaaactgtggaacctgaacaactaccgcacagatatgatccaggct
ctgggcggtgtggagggcatcctggagcacacactcttcaaaggcacttacttccccacc
tgggagggtctcttctgggaaaaggccagtggctttgaggagtccatgaaatggaagaag
ctgaccaatgcccagagatctggtctgaaccaaatccccaaccgtcgcttcaccctttgg
tggtcgcccaccatcaacagagccaacgtgtacgtgggtttccaggtgcaacttgacctc
acaggaatcttcatgcacggcaagatccccactctgaagatctccctcattcagatcttc
agggctcacttgtggcagaagattcatgagagcatcgtcatggatctctgtcaggtgttt
gatcaggaactggatgctcttgagattgagacagtgcagaaggagaccatccaccctagg
aagtcgtacaagatgaactcatcctgtgcagacatcctcctctttgcatcatacaagtgg
aacgtctctcgaccatctctgcttgctgactccaaggacgtgatggacagcaccaccaca
cagaaatactggatcgacatccaactgcgctggggtgactacgactcgcatgacatcgag
cgttacgccagggccaagttcctggactacaccactgacaacatgagtatttacccctcc
cctacaggggtgctcattgctatcgatctggcttacaacctccacagtgcctatggtaac
tggttccctggaagcaagcctctgatccagcaggccatggccaaaatcatgaaggccaac
cctgccctgtatgtgctcagggagcgcatccgcaaaggtctgcagctgtattcttccgag
cccactgagccgtacctgtcctcacagaactacggtgaactcttctccaaccagatcatc
tggtttgtggatgacaccaacgtgtaccgagtcaccatccacaagacctttgagggtaac
ttgaccacgaagcccatcaatggagctattttcatcttcaaccccaggacgggtcagctc
tttctgaagatcattcacacgtctgtgtgggccggacagaaacgtcttggacagctggcc
aaatggaagacagctgaagaagtggctgccctgattcgctccctccctgtggaggagcag
ccgaaacagatcattgtaaccaggaagggcatgttggatcctctggaggtccacttgctc
gacttccccaacatcgtgatcaaaggttctgagttgcagctgcccttccaggcctgtctg
aaggtggagaagtttggagacctgatcctgaaggctacagagcctcagatggtgctgttc
aacctctacgacgactggctcaagaccatctcgtcttacacagccttctcccgactcatc
ctgatcctcagagcactccacgtcaacaatgaccgcgccaaagtgatcctgaaacctgac
aaaacaactatcaccgagccccatcacatctggcccacgctcactgatgaggagtggatc
aaggtggaagtgcaactcaaagatctcattctggcagattatggcaaaaagaacaacgtg
aacgtggcctcactgacccagtctgagatccgtgacattatcctgggtatggagatctca
gctccgtcacagcagcgacagcagattgccgagattgagaagcagaccaaggagcagtca
cagctcacggccacgcagacccgaactgtcaacaagcacggtgacgagatcatcacctcc
accacctccaactacgagacccagaccttctcctcaaagactgaatggagggtcagggcc
atatctgctgccaatctccacctccgaaccaaccacatctacgtgtcatctgatgacatc
aaggagacaggctacacctacatcctgcccaagaacgtcctcaagaagtttatctgcatc
tcagatctgcgagcacagattgctggctacctgtatggcaccagtccaccagacaacccc
caggtgaaggagatccgttgtatcgtcatggtgccacagtggggaacacaccagactgtc
cacctgcccaaccagctgcctggtcatgaataccttaaagaaatggagcccctcggctgg
atccatactcagcctaatgagtcgcctcagctgtccccacaggacgtcaccacccatgcc
aaggtcatggctgacaacccgtcttgggacggagagaagaccatcatcatcacttgcagc
ttcacccctggctcgtgcacgctcacagcctacaagctgacacccagtggatatgagtgg
ggtcggcagaacacagacaagggcaacaaccctaaaggctacctgccgtcccactatgaa
agagtgcagatgctgctgtctgatcgcttcctgggcttcttcatggtgcctggccaagtg
tcctggaactacaacttcatgggtgtgcgccacgaccccaacatgaagtacgacttgcag
ctggcaaaccccaaggagttctaccacgaagtccaccggccctcgcacttcctaaacttt
gcctcactgcaggagggtgagatctataacgcagaccgtgaggacatgtacgcctga
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integrated database retrieval system
