Epinephelus lanceolatus (giant grouper): 117259712
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Entry
117259712 CDS
T07331
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04137
Mitophagy - animal
ely04140
Autophagy - animal
ely04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117259712 (hif1al)
04137 Mitophagy - animal
117259712 (hif1al)
04148 Efferocytosis
117259712 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117259712 (hif1al)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117259712 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
117259712
NCBI-ProteinID:
XP_033487235
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All DBs
Position
9:11110620..11144845
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AA seq
675 aa
AA seq
DB search
MEEKEEAVAVRRTSSEQRKLRSRDAARCRRSQESEVFYELAHTLPLPRRVCSHLDKSAII
RAAISFLRMHHLLQPAGEKQKEEDPMDAFYPQALAGFIMVMTEEGDMTYLTENVSRYIGI
TQLELLGQSIYDFVHPCDQEELRDLMAPRPGLSKKPLAQQQKERNFFLRMKSTLTSRGRT
VNIKSAAWKVLHCTGYIHQFDGSSRLSPAGRVMTLLCEPIPHPSSVEFPLGTCTFLTRHS
MDLCFTHCEGRVTELVGYKPEDLIGRSAYEFHHALDSDHVNKSLHTLLSKGQVSTRQYRF
LANSGGFVWVETQATVLYSSKMSKPEAVVCLNFVLSAVEQPDVVFSMEQIRRGQPAEAEP
LSPALAPKDCGTSDISDPDSEHLISSSKTQRAGSDPSNSAELFFKLKEQPEELLQLAPAA
GDIIVPLSGENFELSFTSPASPKSVPDNPQDLCTPQLRKLLSPIFSPITPPSSSQESSPN
PKQSPCEDEVLDNGEVGSFLAVWREDFQKTGQTLESVFPKDMEEMDLEMLAPYISMDDDF
QLTVLSSLPEEADKPRPSWPEPSSVSHAITVSRKRCHNQDNEMLSQLMIQEKRQKHDPSS
FEEELLLSHRLLGCLEVTDRSDLFLEPVPGKHTKLLTGRDPVLQGIQGLGDSAAVMRNIF
TPLPPDLSPPLSPIT
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaagaggaagccgtcgcagtgagacggaccagttcagagcagaggaagctg
cgttctcgtgatgcggccagatgtaggcggagtcaggagtcagaggtgttttatgagctt
gcccacactctgcccctcccccgcagagtctgctcacacctggacaaatctgccatcata
agagctgccatcagcttcctgcggatgcaccacctcctccaaccagcaggtgagaagcag
aaagaggaggatccaatggatgctttctatcctcaggcgttggctggcttcatcatggtg
atgactgaggagggagacatgacctacctgacggaaaacgtcagcagatacattggcatc
acacagctggagctgcttggtcagagtatttacgactttgttcatccctgtgatcaggag
gagctcagagacctgatggctccacgtccaggtttgagtaagaaaccactggcacaacag
cagaaggagaggaacttcttcctgcgcatgaagagtaccctgaccagcagagggcgcacc
gtcaacatcaagtctgctgcctggaaggttcttcactgtacagggtacatccatcagttc
gatggcagctccaggttgtcccctgctggccgagtgatgaccctgctgtgtgaacccatc
ccccacccatccagtgtggaattccctctgggcacctgcaccttcctcacccgccacagc
atggacctttgtttcacacactgcgagggcagggtgacagagttggtgggatacaaacct
gaagatctgattggtcgctcagcctacgagtttcatcatgcactcgactctgatcacgtc
aacaagagcctgcacacattgctgtccaaaggtcaggtgagcaccagacaataccgtttc
ctggcaaacagtggtggctttgtctgggtagagactcaggcgaccgtcctctacagcagc
aagatgtcaaagcctgaggccgtcgtctgcctgaacttcgtactcagtgccgtggagcag
ccagatgttgttttctccatggagcagatccgtcgtggccagccggctgaagctgaaccc
ctctcaccagcgctggcaccaaaagactgcgggacttctgacatctctgaccctgacagt
gaacatctcatcagctccagcaagactcagcgtgcaggttcagatcccagcaacagtgca
gagctcttcttcaaattgaaagagcagccggaggagcttctccagttggctcccgcagcc
ggagacatcattgtcccgctgtcaggagaaaatttcgagctgtcgttcaccagtccagcc
agtccaaagtcagtgccagacaaccctcaggacctgtgcaccccacagctgcgaaagctc
ctctcacccatcttcagcccaatcactccaccgtcatcatcacaagaatcctctcccaat
cctaagcagagcccctgtgaggacgaggtcctggacaacggcgaggtgggcagtttcttg
gctgtttggcgagaggactttcagaagacaggacaaacactggagtctgtctttcctaag
gacatggaggaaatggatctggaaatgttggctccttatatctctatggacgatgacttc
cagctaaccgtcctcagcagtttgccagaggaggctgacaaacctcggccctcttggcct
gaaccctcgtctgtatcgcatgcaattacagtgagcaggaaacggtgccataaccaagat
aatgagatgctgtcccagctgatgattcaggagaagagacagaaacatgatccttcctca
ttcgaagaggaacttcttctaagccacagactactgggttgtctggaggtaaccgaccga
tcagatttgttcctggagccggtacctggaaagcacacaaagcttctcacaggcagagac
cctgttctgcaaggcatacagggacttggcgacagtgcagctgtgatgaggaacattttc
acacctcttccacctgacctgtcaccacctctctcccccatcacctga
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