Epinephelus lanceolatus (giant grouper): 117259778
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Entry
117259778 CDS
T07331
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117259778 (si:ch211-114c17.1)
Spliceosome [BR:
ely03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117259778 (si:ch211-114c17.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_2
TPR_11
TPR_12
TPR_15
TPR_MalT
HrpB1_HrpK
UTP6_C
TPR_21
COX5A
Motif
Other DBs
NCBI-GeneID:
117259778
NCBI-ProteinID:
XP_033487369
LinkDB
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Position
1:complement(20607177..20619958)
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AA seq
729 aa
AA seq
DB search
MAAEGSEEEMSGNGELEESSAMEASDDPALSPTEMAVNSEENGSLAVAPEAPVGPDPTTF
TMPQAAEDEEGELPVDFERLWKAAHDNPQDFTSWTDLLQYCEQESHVTASRRALEAFLVR
YPLCYGYWKKFADLERRAGYNNKAEEVCVQGLQVIPLSVDLWIHYINLLLGTLDMNLPES
PTRIRSVFEDAVVAAGLDFHSDRLWDLYVEWEKEQGNMKNAAAVLDRVLKVPTQLYNTHY
DKFKEHLNGHEPKEVLSPEEYEELRALCRQSQKAERAERAQEEEEEERPPGEEEPATPEG
TDSEELMQKIREQVLIRRDKVYQDNEGEVRKRWHYEDAIKRPYFHVKPLDRHQLRSWHSY
LDWEIAQLSNDTKDPQDPQQDPNQAATEGSEVTAQPQEQSEDAAVATDDHRVRILFERCL
IACALYEEFWTRYTQYLEPQSVDEARAVFKRACEIHLIYKPNIHMQWATFEERHGDLTEA
RRVLEALEKTLPGLAVVRLRRAALERRAGQLDQSEALLQEAVAESKEKPTLHAFYSIKLA
RLLLKLGRNPSRARTVLQEALEISPDNDKLHLNLLELEVSGDPWASAEAVQECVTRALAA
PLAPHTKILFSQRGLQFAEDYSNSIQSVLSVYEEHQKLLKELGGTKREAENGDEDPEKLS
KSEDGTAVAVSAPTMPHVPITTPPPPVMGTDATSQAAYGGYSSWYQQPQYGSYGYQNTWN
YNQGYYPPS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaaggcagtgaggaggagatgagcggcaacggggagctcgaggagtcttca
gccatggaggcttctgacgatcctgccttgtctccgactgagatggcagtaaattcagaa
gagaacggcagtcttgctgtggcccctgaggcccccgtaggccctgaccctacaaccttc
accatgccccaagctgcagaagatgaggagggagaactacctgtggactttgagcgcctg
tggaaggctgcccacgacaatcctcaagacttcaccagctggaccgacctgctgcagtac
tgcgagcaagagagtcacgtcacagcgtcacgcagagcgctagaggctttcctcgttcgc
tacccgctctgctacggctactggaagaaatttgctgatctggagcgccgcgctggatac
aacaataaggcagaggaggtgtgtgttcagggtctccaggtgatccccctgagtgtagat
ctgtggatccactacatcaatctgctgctgggaacactggacatgaacctgcctgagtcg
cccacacggattcgcagtgtgttcgaggacgcggttgtggcagcaggtctggacttccac
tcagaccggctttgggatctttatgtggagtgggagaaggagcaggggaacatgaagaac
gcagcagccgtcctggacagagtcctcaaagtccccacacagctttacaacacccactac
gacaagttcaaggagcacctgaacggccacgagcccaaggaggtgctctccccagaggag
tacgaggagctgagggcgttgtgtcgccagagtcagaaggcagaacgtgcagaacgggca
caggaggaggaagaggaggagaggccgccgggggaggaagagcccgccacacctgagggc
acagactccgaggagttaatgcagaagataagggaacaagtgctgattcgaagggacaaa
gtttaccaggacaatgagggagaagtccgcaagagatggcactatgaagacgctatcaaa
cgtccctacttccacgtcaagcctcttgatcgccaccagctgcggagctggcactcctac
ctggactgggaaatcgctcagctgagcaatgacaccaaagacccccaagacccccaacaa
gatccaaaccaggcagccacagaggggtcagaggtcacagctcagcctcaagaacaatca
gaggacgctgcagttgccactgatgatcacagggttcgcatcctcttcgagcgctgcctc
atcgcctgcgctctgtatgaggagttctggaccaggtatactcagtacctggagccgcaa
agtgtggacgaggcgcgggctgttttcaaacgagcctgtgagatccacctgatatacaaa
ccaaacatccacatgcagtgggccaccttcgaggagagacacggtgacttaaccgaggcc
cgccgggtgctggaggccctggagaaaaccctaccagggttggcagtggtccgtcttcgc
agggcggctttagagaggcgagcgggccagctggaccaatcagaggccctgctgcaggag
gcggtggccgaatccaaagagaagcccacgttacatgctttttattccatcaagctggct
cgtctgctgctgaagctgggcaggaaccccagcagagcccgcacggttttacaggaggcg
ctggagatcagtccggataacgataagctgcacctgaacctgctggagctggaggtgtcg
ggtgacccctgggcgtcagctgaggcggtgcaggagtgtgtgacacgagccctggcagct
cccctcgccccacacaccaagatcctcttctcacagagaggcctgcagttcgccgaggac
tacagcaactctatccagagtgtgctgtccgtctatgaggaacaccagaagctgctgaag
gagctcggtggaacgaagagagaagcagagaatggggatgaggacccggagaagctgagc
aaaagtgaggatggcaccgctgttgccgtgtctgcacccaccatgccgcatgtccctatc
accacaccccctcctcctgtgatgggcacagacgccacctcacaggccgcctacggggga
tacagcagctggtaccagcaaccgcagtacggcagctacggctaccagaacacctggaac
tacaaccaaggctactatccccccagctaa
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