Epinephelus lanceolatus (giant grouper): 117259820
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Entry
117259820 CDS
T07331
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely02010
ABC transporters
ely04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117259820 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117259820 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ely02000
]
117259820 (abca1b)
Transporters [BR:
ely02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117259820 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
Motif
Other DBs
NCBI-GeneID:
117259820
NCBI-ProteinID:
XP_033487512
LinkDB
All DBs
Position
1:complement(1268023..1310585)
Genome browser
AA seq
2294 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLVEILWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWLQGILCNANNPCFRSPTPGESPGIVGNFNDSIISRLFSDAKKILLYSQNDK
NLEGFKELSQALHVLQESQSGFKLRHFLQDNETLSTFLQRDASLSEHAVQQIKDADVNLE
KVLLKGFGVHLRDMCPRKAGRRSVEDFVTISDQQVLTQVQDVICQATPTWLNHAEEHFLN
NLDFLKPIKRDVRSDPKAVKLVAIATNNLLDSLSSLAVELAGMKSWVDLRNEIIFLTHNA
TSSPSTMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDETLSLYDNSST
PYCNSLVKNMDSNPMSRMIWQALKPLLMGKILYTPHTPATQRVIHEMNRTFQELGVFRDL
GGMWEEMRPKVWNFMENSEQMDLIRTLLKNNVTASFFHAQLADTDWTVADVSNFLSKKAG
QARDGALTWREVFNETDQAIMSISRFMECVNLDKLEPVSTEERLVNQSMVLLEDRKFWAG
IVFPDVDPNSTELPAKLNYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGFTY
LQDVIEHGIIRAMTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
LKSVVYEKEARLKETMRIMGLNNGILWFSWFISSLIPLLVSAGLLVLLLKKGNLLPYSDP
GVVFLFLGSFAVVTIMQCFLLSTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGFGA
KVFASFLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLEEDDFSLRTAIIMMYFDSFLY
GVLTWYIEAVFPGQYGIPRPWYFPFTKSYWFGEKDRKSSKVPLSRRGNSEAVCIEEEPTH
LEPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGRDIRTELSTIRQSLGVCPQHNVLFSMLTVEEHIWFYGRLKGLSEQQVKGEIEQ
ILQDTGLPHKRTSRTSALSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKKEP
EPSLSSCRNSSSTVSFTKKEEECASVSSSDAGLGSDHESEAATIENGPAASICDVPFVPP
DVSLVSSLILCHVPAARLVEDLGHELTYVLPYSAAKDGAFVELFKDLDQKLPDLGISSYG
VSDTTLEEIFLKVAEDNGVDTEVPSDGTLPVQRRRRTHAFGGGDHQSCLRPLTEDDNNDC
NESDGDPECRETDWLNCTDGKGSYQVSGWTLKRQQFVALMWKRFLYARRSRKGFFAQIVL
PAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFVSDDAPGDTNMQKLLNSLLDAPG
FGTRCMDGHPIPEAPCTMGDEEWKTPEVPESVLQLFSSANWTMEDPSPACFCSCDGKKKM
LPDCPAGAGGLPPPEMKLSATDSLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYG
GFSLGARSTQVLPAANEVDDAIERVRKIFELEKGAAADRFLDSLSGFINGLDTKNNVKIW
FNNKGWHSIGAFVNVMNNGILRANLPEGKDPSKFGISAFNHPLNLTKEQLSQVALVTTSV
DVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWVANFIWDMCNYVVP
ATLVVLIFICFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSV
NILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALE
RFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFCIKPRSTSALTKLGPLGEE
DEDVARERQRIVHGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGAG
KTTTFKMLTGDTLVTSGEAFLAGKSILREIDEVHQNMGYCPQFDSINELLTGREHLELYA
VLRGVPEKEVCDVAEWGIRKLGLVKYADKAAGSYSGGNMRKLSTAMALIGAPPVVFLDEP
TTGMDPKARRALWNCIHSVIKEGRSIVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHL
KNRFGDGYTIILRVGGPDADLVPVMKFIESELSGSTLKEKHRNMLQYQLPSSLTSLTHIF
SILAKNKETLRIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDNSVRRRDVAIEVPTLSCSL
SATEGGATLGESVL
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctcgacacagctgggactgttgctgtggaagaacttcacctacagacgacga
cagacgctccagctcctggtggagatcctctggccgctcttcatcttcttcatcctcatc
gccgtgcggctcaactaccctccgtacgagcagcatgagtgtcattttccaaacaaagcg
atgccgtcggccggcacgctgccctggcttcaggggatcctctgcaacgccaacaacccg
tgcttcaggagcccgacgccgggcgagtctccgggcatcgtaggcaacttcaatgactcc
ataatttctcgcctgttttcggacgccaagaagatcctcttgtacagtcagaacgataaa
aacctggaggggttcaaggaactctctcaggccctgcacgtgctgcaggagagccaatca
ggattcaagttgaggcatttcctgcaggataacgagaccctgtctacgttcctgcagagg
gacgcctcactctctgaacacgccgtccaacagattaaagatgccgacgtcaacctggag
aaggtcctcttgaaaggttttggggtccacctgagggacatgtgtcccaggaaggcgggg
aggcggagcgtggaggactttgtgacaatctcagaccaacaggtgttgacgcaggtacag
gatgtcatctgtcaggccacgcccacctggctgaaccacgctgaggagcacttcctgaac
aacctggacttcctgaaacccatcaagagggacgtgaggtccgaccccaaggctgtcaaa
ctggttgccatagcgaccaacaacctcctggacagcctgagttcactggcagtggagttg
gctggaatgaagagctgggtcgacctgaggaatgagatcatcttcctgacacacaacgcc
acgtcgtcacccagcaccatgtaccaggcggtctccaggatcgtgtgcggtcaccctgaa
ggcggcggcctgcagattaaatccctcaactggtacgaggacagcaactacaaggctctg
ttcggaaaccacaacagcagcgaggacgagaccctgtcgctctacgacaactcctccact
ccgtactgtaacagcctggtgaagaacatggactcgaacccgatgtcgcggatgatctgg
caggccctgaagcctctgctgatggggaagatcctgtacactcctcacacccccgccacc
cagagagtcatccatgagatgaaccggaccttccaggagcttggtgtgttcagggacctc
ggtgggatgtgggaggagatgagacccaaagtctggaacttcatggagaacagcgagcag
atggacctgatcaggactctgctgaagaacaacgtcactgccagcttcttccacgctcag
ctggccgacaccgactggactgtggctgacgtctccaacttcctgtccaaaaaggcggga
caagcccgggacggcgcccttacctggagggaggtgttcaacgagactgaccaagccatc
atgagtatctcccgcttcatggagtgtgtgaacctggacaaactggagccggtctccact
gaggagcgattggtcaaccagtccatggtgctgctggaggacaggaagttctgggcaggg
atcgttttcccagacgtcgaccccaactccaccgagctgccggccaaactcaactacaag
atccgcatggacatcgacaacgtggagcggaccaataagatcaaagacgcgtactgggac
cccggtcctcgtgctgacccctttgaggacatgcggtacatctggggtgggttcacatac
ctgcaggatgttattgagcatggcatcatccgagccatgacgggcaccaaggagaagacg
ggcgtctacatccagcagatgccgtatccctgctacgtagacgacatcttcctgcgtgtg
atgagccgctccatgcctctcttcatgactctggcctggatgtactcggtggcgatcatc
ctgaagagcgtggtgtatgagaaggaggcgcggctgaaggagaccatgaggattatggga
ttgaataacggcatcttgtggttcagctggttcatcagcagcctgattcctctgctggtc
agcgccgggctgctggtgctgctgctcaagaaggggaacctgctgccctacagtgacccc
ggtgtggtcttcctcttcctggggtccttcgccgtggtaaccatcatgcagtgcttcctc
ctcagcactgcgttcgcccgtgctaacctggccgccgcctgtggaggaatcatctacttc
accctctacctgccctacgtgctctgcgtcgcctggcaggactacatcggcttcggagcc
aaagtctttgcaagcttcctgtcccccgtggcgttcgggttcggctgtgagtacttcgcc
ttgttcgaggagcagggagtcggcatccagtggaagaacctggtgtcgagtcctctggag
gaggacgacttcagcctccgcaccgccatcatcatgatgtactttgactccttcctgtac
ggagtcctcacctggtacatcgaggccgtgtttccaggtcagtacgggatccctcggccc
tggtatttccccttcaccaagtcctactggtttggagagaaagacaggaagtccagcaaa
gtccctctgagccggagaggaaactcagaagctgtgtgtatcgaggaggagccaactcac
ctggagcctggcgtctacatcgagaacctggtgaaggtttatcgtcacgggaagaagctg
gcggtggacggactgacgctcggcttctatgagggacaaatcacgtccttcctgggacac
aacggagccggaaaaaccaccaccatgtccatcctgacgggtctgttccctccgacctct
ggtaccgcctacatcctgggccgagacattcggaccgagctgagcaccatcagacagagt
ctgggagtctgtcctcaacacaacgtcctcttcagcatgctgacggtggaggagcacatc
tggttctacggccggctcaaaggtctgtcagagcagcaggtcaaaggtgagatcgagcag
atcctgcaggacaccgggctgccgcacaaacgcacctccaggaccagcgcgctgtccggc
ggcatgcagaggaaactgtctgtggctctggcctttgttgggggctcaaaggttgtgatc
cttgacgagcccacggccggcgtcgacccctacgcccgcagagggatctgggatctgctg
ctgaagtaccgacagggccggaccatcatcctgtccacacaccacatggacgaggcggac
atcctgggcgaccggatcgccatcatctcccatgggaagttgtgctgcgtgggctcgtct
ctgtacctgaagaaccagctggggaccggctactacctgacactggtgaagaaggagccg
gagccgtcgctcagctcctgcaggaactcgtccagcaccgtgtccttcaccaagaaggag
gaggagtgcgcctcggtcagcagcagtgacgcaggactcggcagcgatcatgaaagtgag
gccgctaccatcgagaacggccccgcagcatccatctgcgacgtccccttcgtgcccccc
gatgtctccttggtctcaagtctgatcctgtgtcacgtcccagccgcccgcctggtggag
gacctcggacacgagctgacctacgtcctgccgtacagtgccgccaaggacggagccttc
gtggagctcttcaaagacctggaccagaagctgcccgacctcggcatctccagctacgga
gtgtccgacaccacgctggaggagattttcctgaaggtggctgaagataacggagtcgac
actgaagtgccctcagatggaacgcttcctgtgcagaggaggaggaggactcacgccttc
ggtggaggagaccatcagagctgcctgagacctttaacagaggacgacaacaacgactgc
aacgagtctgacggagatcctgagtgccgggagacggactggttgaactgtaccgacggt
aaaggatcgtatcaggtgagcggctggactctgaagaggcagcagtttgtggctctgatg
tggaaacgatttctgtacgctcgacgctccaggaagggcttctttgctcagatcgttctt
cctgccgtgttcgtgtgcatcgctctggtcttcagtctcatcgtccctccgtttggaaag
tatcccagtctggagctgcagccgtggatgtacgaggaccaggtcaccttcgtcagtgac
gacgcccccggagacaccaacatgcagaagttattgaactctctactggacgctccgggc
tttgggacgcgctgcatggacggacatcccatcccagaggctccgtgtacgatgggcgat
gaagagtggaaaactcctgaggtccctgaaagcgtcctgcagctgttcagctcggctaac
tggaccatggaggatccgtctccggcctgtttctgcagctgcgacgggaagaagaagatg
ctgccggactgtcctgctggagccggaggtctgcccccacctgagatgaagctgagcgcc
accgactctctgcagaacctgacaggaagaaacatctcagactacctggtgaaaacgtac
gctcagatcatcggaaagagtttgaagaacaaagtctgggtgaatgaattcaggtacgga
ggcttctcattgggcgcccggagcactcaggtcctcccagcagccaacgaggttgatgac
gccatcgaaagagtcagaaagatctttgagttagagaagggagctgctgcagatcgattc
ctcgacagtttgtcaggtttcatcaacggtttggacacaaagaacaacgtcaagatctgg
ttcaataacaaaggctggcacagcatcggcgccttcgtcaacgtgatgaataacggcatc
ctgagagcgaacctacctgaagggaaagacccgagcaagttcggcatcagcgccttcaac
catcctctgaacctgaccaaggagcagctgtcacaggtggcactggtaacaacctctgtg
gacgtcctggtgtccatctgcgtgatcttcgccatgtccttcgtcccggccagtttcgtg
gtcttcctcatccaggagcgcgtcagtaaagccaaacacatgcagttcatcagcggagtg
cagccgctgctctactgggtcgccaacttcatctgggacatgtgtaactacgtcgtcccg
gcaacactggtcgtcctcatcttcatctgcttccagcaaaaagcctacgtgtcgtccacc
aacctgccggtcctcgcgctgctgctgctgctctatggctggtcgatcactcctctgatg
tacccggcctccttcttctttaagatccccagcacagcgtacgtcgtcctcaccagcgtc
aacatcctcatcggcatcaatggcagcatctcaacctttgtcatggagctgttcggaaac
aacgagatcggaggaattaatgacatcctgaagaacgtcctcctcatcttccctcacttc
tgtctcgggcggggactcatcgacatggtgaagaaccaggcgatggccgacgccctcgag
agatttggtgagaacaggttccgttctcctctggagtgggacatggtgggaaagaacctg
ttcgccatggctgtggagggagtggtgttcttcatcatcaccgtcctcatccagtacaga
ttctgcatcaaacccaggtcaaccagtgcactcaccaaactgggaccactgggagaggag
gacgaggacgtggcccgagagagacagaggattgttcacggtctcggacacggagacatc
ctggagctgcgacagctcaccaaggtgtttaagaggaaacagaaaccagcagtggatcga
ctgtgtgtcgggatcccacctggagagtgtttcgggctgctcggtgtgaacggagctgga
aagacgacaacctttaagatgctgacaggagacacgttggtgaccagcggagaggccttc
ctggcagggaagagcatcctgagggagatcgacgaggtccatcagaacatgggatactgt
cctcagtttgactccatcaacgagctgctgacaggaagagaacacctggagctgtacgcc
gtcctcagaggcgtccccgagaaggaagtgtgcgacgtggcagagtggggcatcaggaag
ttgggtctggtgaagtacgctgataaagcagcaggaagttacagtggaggaaacatgagg
aaactgtccacagccatggctctgatcggagcgccgcccgtcgtcttcttggacgagccc
accactggcatggaccccaaagctcgccgcgccctctggaactgcatccacagcgtcatc
aaggagggacgctccatcgtcctcacctcacacagtatggaggagtgtgaggctctgtgt
accaggatggccatcatggtgaacggcaggttcagatgtctgggcagcgtccaacacctg
aagaacaggtttggggacgggtacaccatcatcctgcgggtgggcggtcctgacgcagac
ctggtgcctgtgatgaagttcatcgagagcgagctgagcggcagcacgctgaaggagaaa
caccgcaacatgctgcagtatcagctgccatcttctctcacctcactcacacacatcttc
tccatcctggccaaaaataaagagacgctgaggatcgaggattactccgtcactcagacc
acactggaccaggtgtttgtgaactttgcgaaggaccagagtgacgactatcactccaaa
gacaactctgtgaggcggagagacgtcgccatcgaggttcccacgctgagctgcagccta
tcagccactgagggcggggccacgctgggggagagcgttttgtga
DBGET
integrated database retrieval system
