Epinephelus lanceolatus (giant grouper): 117259924
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Entry
117259924 CDS
T07331
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117259924 (hnf1ba)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117259924 (hnf1ba)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
LolA
Motif
Other DBs
NCBI-GeneID:
117259924
NCBI-ProteinID:
XP_033487617
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Position
9:complement(19783036..19803530)
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AA seq
571 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPTGFGVKLESLPMSPAPPQS
VKMNGADTDSKPVFHTLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRA
EVERMLAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAAL
YTWYVRKQREILRQFNQAVQGSGSNMIDKGNQDPMFFFPEYNPTSQGMGQPGDEVGSEPS
CKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLG
SNLVTEVRVYNWFANRRKEEAFRQKLALDAINVPPHSMNPLLSHSSPHHNSTSPPMRYSQ
GPGEVTSSTAISHHSSNAMATSQSVLQQVSPGGLDHSHNLLSPDAKMISGSGGGLPPVST
LTNIHSSHHGHQQTQNLIMPLTGVMAIAQSLNTSQSQTVPVINSVAGSLAALQPVQFSQQ
LHSPHQQSLMQQSPSHMSQQPFMATVTHSHMYPHKQEPPQYSHPSRFPSAMVVTDANSIS
TISSMSSSKTDAPVNKMVQLGGLSWCPLQAW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaaaatggtatccaagctgacatccctgcagcaggagctcctcagcgccctg
ctggactcaggagttaccaaagatgttctgatccaggccctggatgatatggaccccagc
ccgacgggctttggagtaaaactggagagcctgcccatgtcccccgctccgcctcagagc
gtcaagatgaacggggcggacaccgactcgaagcccgtcttccacacgctcaccaacggc
cacagcaagggtaagctctccggggatgagggctccgaggacggggacgactacgacacc
ccgccgatactgaaggagctccagtcgctcaacacggaggaggccgccgagcagagggcg
gaggtggagcgcatgttggcagaggatccatggcgtgctgcccgcatgatcaaaggttac
atgcaacagcacaacatcccccaaagggaggtggtggacgtcacggggcttaaccagtct
cacctttcccagcacctcaacaaaggcacgcccatgaaaacacagaagcgagcggccctc
tacacctggtatgtcaggaaacagcgggaaattctccgacagttcaaccaggcagtgcaa
ggctctggcagcaacatgatagacaaaggcaatcaggatccgatgttttttttcccagag
tacaacccaaccagtcagggcatgggccagcctggtgacgaggtcggcagcgaaccctcc
tgcaagaaaatgagacgtaaccgtttcaaatggggtcctgcatcccagcaaatcctgtac
caggcctatgaacggcagaagaaccccagcaaggaggagagggaagctttggtagaagag
tgcaacagagccgagtgtctccagagaggcgtctccccttccaaagctcagggcctcggc
tctaatctggtcactgaagtgcgagtctataactggtttgccaaccgacgtaaagaggaa
gccttcaggcagaaattagccctggacgccatcaacgtaccgccacacagcatgaaccct
ctgctgtcacacagctcgccacatcataacagcacttcacctcccatgcgttacagccaa
ggccccggtgaggtcacctcctccacggccatcagtcaccacagtagcaacgcgatggcg
accagccagtcagtgctccagcaggtgtctccgggaggattggaccacagccacaatctg
ctgtcacctgacgccaagatgatttcaggttcaggtggaggacttcctccagtcagcaca
ctgaccaacatccacagttcccatcacggccaccagcagacacagaacctcatcatgccc
ctaactggagtcatggccatagcacagagtttaaacacatcgcaatctcagacagtgcca
gtgatcaacagcgtggcgggcagccttgcagcgctgcaaccggtgcagttttcccagcag
ctccacagcccccaccagcagagcctgatgcagcagtcccccagccacatgagccagcag
ccgttcatggctactgtcacacactcgcacatgtatcctcacaagcaagagcccccgcaa
tattcccacccgtcacgtttcccctcggccatggtggtcacagacgccaacagcatcagc
accatcagctccatgtcctcgagcaagacggacgctcctgtaaacaagatggtgcaactc
gggggtctctcctggtgtcctcttcaagcttggtga
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