Epinephelus lanceolatus (giant grouper): 117260000
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Entry
117260000 CDS
T07331
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117260000 (npas1)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117260000 (npas1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
117260000
NCBI-ProteinID:
XP_033487736
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All DBs
Position
9:25752789..25835180
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AA seq
811 aa
AA seq
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MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLMEGDSNCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTGPESASSSASTSSLAGTPEPAPSSPHSPADDPPDRGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSARSVRRPMGLVALAHTLPPTTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDMTPAEVVGHTCYHFIHVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTEMPDTPL
DLLQLPENVRAERLRVSSSPTDSSPQARGSQPVKSSVGKSDPDTKGREKFTAATIQSEDR
RKRLLRSDPEGAPPETRRRLEELRHAEESVSASSDLASESEGEEEEETEWDQGGDSDRLK
QEDGGGGGKQNRGGDTPTRGERGSRVHNGRAVIQQLKSVVTPSPLPGSPSIKTEHEALTT
GGRWGSHTQTSTSHTHTSQPQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPS
PALSPAMSVSSPLPREDRVVSGVVSRSSGGAGSAPDFELLQRLAAGGAAGRVLFHPLALG
PQGPQSLYAPSTIRYAPPELPPSHHHSAGHSDGLQLRSDHHKGPPPTFFPHLQRLAGLPP
FSGFSPSDSPFSSGLPFCMNGLRGAAGSEED
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccgtttgtcagcgaggggaagtgcgtgagtgtggagtgggatttccta
caaggactactggccaagcctcccacccttccctgtctccagaacctgcgtaaagagaag
tctcgcaatgcggctcgttcacgccgggggaaggagaatttcgagttcttcgagctggcc
aagatgctgcctctgccgggggccatcaccagccagctggacaaggcctcggtcatccgg
ctgaccatcagctacctgcacatgcgcacctttgccagtcagggagacccaccctggagc
cctctgatggagggagacagcaactgcagcaaagtaagacgatcatctcattccctggcc
actgacatgtttgagcagcacctaggggcgcacctcctgcagtctctggatggctttgtg
ttcgtggtcagtcaggagggacgtttcctctacatctcagagacagtttctatctacctg
ggactctcacaggtggagctgactggcagcagcgtgtttgactacatccacccagcggac
cacgtcgagatggcagagcggctgggaatcaggccgcatctaagagccgaggccggctgc
cacacgggtcccgagagcgcctccagctccgcgtccacctcctccctggctggtacccct
gaacccgctccgtctagtcctcattctcctgctgatgatcctcccgaccgcggcttcttc
atccgcatgaaatccacactcaccaaaagaggcctgcacgtcaagtcgtctggatacaag
gtaatccatgtgacaggacgaatccgctgccgccctgcacttgtgccgggctccgctcgc
tcagtgcgtcgaccgatgggtctggttgcgctggcacacaccctcccgcccaccacgctt
aatgaagtccgcatggagagtcaaatgtttgtcttccgcgtcaacatggacctccaggtc
acatattgtgagaacaggatctcagagtatatggatatgaccccagcagaggtggtggga
cacacctgttaccacttcatccacgtagaagacctggaaaacctgcggcagagccatgag
gacttgctgaggaaaggccaggtggtgaccggctactaccgctggctccagagacgagga
ggctacctgtggatccagtccactgccaccgtctccatcaaccacaaagcgccccatgaa
cgcaacgtcatttgggtcaactacgtcctgagtcgaacagagatgcccgacactcccctg
gatctactgcagctaccagagaatgtacgagcagagcgacttcgagttagctcatccccc
accgacagctccccacaggcccgaggctcgcagccagtgaagagctcagtggggaagagt
gaccccgacactaaaggcagagagaaattcactgcagccaccatccaatcagaggacagg
agaaagcgcctgctgaggtccgaccccgagggcgctcctcccgaaacccgtcgcagactg
gaggagctccgtcacgcagaagagagtgtatcggcctcctctgacctggcgagcgaaagc
gagggggaggaggaagaagagacagagtgggaccaggggggagacagtgacagattgaaa
caggaagacggcgggggaggaggtaaacagaataggggaggagacacccccactagaggg
gagagagggagcagggtgcacaacggccgggctgtgatccagcagctcaagagcgtagtg
accccgtctcccctgcctggcagccccagcatcaagactgaacatgaagccctgaccacc
ggggggcgttgggggtcacacacacagacctccacctctcacacacacacctcccagccc
caaccctcacatgcacacacaccctccagcagcctcaacggcgacagccccaccaccccg
atccccgactcttcttccagcagtgaagcccccccaaaagggctgttcactcccccgtcc
ccggcgctgtcccccgccatgtccgtgtcctccccgctgcctcgcgaggacagagttgtg
tcgggggtagtcagtcggagcagtggcggtgcaggtagtgctcctgactttgagctactc
cagagactggctgcaggcggtgcagcggggcgggtcctcttccacccccttgccctcggc
ccgcagggccctcagagcctctacgctcctagcactatccgctacgctccacctgagctg
cccccctcccaccaccacagcgcaggacacagcgatggcctgcagctacgctcagaccac
cacaagggacccccgccaaccttcttcccccacctacagcggttggccggcttgccaccc
ttcagtggtttctccccgtctgacagccctttctcctccggcctgcccttctgtatgaat
ggactgaggggggctgcaggctccgaggaggactga
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