Epinephelus lanceolatus (giant grouper): 117260319
Help
Entry
117260319 CDS
T07331
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ely04054
]
117260319
Pattern recognition receptors [BR:
ely04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117260319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NACHT
NLRC4_HD2
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
DFF-C
LRR_4
7TM_GPCR_Srsx
PatG_D
Motif
Other DBs
NCBI-GeneID:
117260319
NCBI-ProteinID:
XP_033488195
LinkDB
All DBs
Position
1:complement(48517786..48535282)
Genome browser
AA seq
1123 aa
AA seq
DB search
MDQCGDTEEGVRPSKTSQAEAQRIQQQRRDCPEPGPGPGPSCVSMKSDWSMGSPIHFKVR
RPADERIQQQRRDCPEPGPGPEPSCVSMKSGWSMGSPIHFKVRRPADERVQSSEVLSDQS
AQQLQTDLDSIFMLLEENILTFVKNELKKIQKALSSHYPECLEGQSEDEEVLDGEDDEHR
RSSREAFLRITLNFLRRMKQEELADCLQSRTYAAACRHKLKCNLKEKFQCVFEGIAKAGN
PTLLNQIYTELYITEGGTAEVNDEHEVRQIETASRKPHRPETTIRQEDVFKASPGRDEPI
RTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIQFTFPFTFRELNVLKEKKYSLVELVHH
FFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTNLIRGK
LLPSARLWITTRPAAANQIPPDCVDMVTEVRGFTDPQKEEYFRKRFRDEEQASRIISHIK
TSRSLHIMCHIPVFCWITATVLEDVMKTREEGELPKTLTEMYIHFLVVQTKVKNIKYDGG
AETDHHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFK
EERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLMEEQQQTTSLRSKLFRDKQNQE
YLHQSAVDKALQSPNGHLDLFLRFLLGLSLQTNQRHLQDLLTQTGSSSQTKTVQYIKKRI
SETLSAERSINLFHCLNELNDRSLVEEIQQSLRSGNLSRYLLSPAQWSALVFILQSSDKD
LDVFDLKKYSASEEAFLRLLPVVKTSNKAVLSGCNLSERSCEALSSALSSQSCSLKELDL
SDNNLTDSGVKLLSAGLQSPNCTLETLSLSGCLISEEGCVSLASALSFNPSHLRELDLSY
NHPGDSGLKLLSDGLQDPHWRLDTLRMDHGGAHRLRPGVRKYECKLELDTNTVNRFLRLL
DDSTTVRHVREDQSYPDHPHRFDFCPQLLCRTGLTGRCYWEVECRGYVYISVSYRGIRRS
GDGEDCVFGWNDQSWSLSCTGGRYSVLHKKKLTNVSSSSSSSSSASRRIAVYVDCPAGTL
SFYRVVSDFLVHLHTFNSTFTGPLYPGFTVWPGSSVSLCPLHI
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtggggacacagaggagggggtccgtccctctaaaaccagccaggctgaa
gctcagaggattcagcagcagagacgagactgtcctgaacctggacctggacctggaccc
agctgtgtgtccatgaagagtgactggtctatgggcagccccattcactttaaagtcaga
cgacctgcggatgaacggattcagcagcagagacgagactgtcctgaacctggacctgga
cctgaacccagctgtgtgtccatgaagagtggctggtctatgggcagccccattcacttt
aaagtcagacgacctgcggatgaacgtgttcagagctcagaggttctcagtgatcaatct
gcccagcagcttcaaacagacctggactccatatttatgctgctcgaagagaacatcctc
acttttgtgaagaacgagctgaagaagatccagaaggctctgagttcacattacccagaa
tgcttagagggtcagagtgaggatgaagaggtgttggatggtgaggatgacgagcacagg
agaagcagcagagaggcgtttctgaggatcacactgaacttcctgaggagaatgaagcag
gaggagctggctgactgtctgcagagcagaacgtatgctgcagcgtgtcgacataaacta
aagtgtaacctgaaggagaagttccagtgtgtgtttgaggggatcgccaaagcaggaaac
ccgacgctcctgaatcagatctacacagagctctacatcacagagggagggactgcagag
gtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccacacagacca
gaaacaaccatcagacaagaagacgtctttaaagcctcacctggaagagatgaaccaatc
agaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttc
actctggactgggctgaagacaaagccaaccaggacatacagttcacatttccattcact
ttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatcac
ttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttc
atctttgacggtctggatgagtgtcgacttcctctggacttccacaacaatgagatcctg
actgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaaa
ctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccct
cctgactgtgttgacatggtgacagaggtcagagggttcactgacccacagaaggaggag
tacttcaggaagagattcagagatgaggagcaggccagcagaatcatctcccacatcaag
acatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctaca
gttctggaggatgtgatgaagaccagagaggaaggagagctgcccaagaccctgactgag
atgtacatccacttcctggtggttcagaccaaagtgaagaacatcaagtatgatggagga
gctgagacagatcatcactggagtccagagagcaggaagatgattgagtctctgggaaaa
ctggcttttgatcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagag
tgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatctttaaa
gaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggag
tttctggctgctcttcatgtccatctgaccttcatcaactctggagtcaatctgatggaa
gaacaacaacaaacaacatccctccggtctaaattatttagagacaaacagaatcaagaa
tatctccaccagagtgctgtggacaaggccttacagagtccaaatggacacctggacttg
ttcctccgcttcctcctgggtctctcactgcagaccaatcagagacacctacaagatctg
ctgacacagacaggaagtagctcacagaccaaaacggtccagtacatcaagaagaggata
agtgagactttgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaac
gatcgttctctggtggaggagatccaacagtccctgagatcaggaaatctctccagatat
cttctctcgccggctcagtggtcggctcttgtcttcatcttacagtcgtcagataaagac
ctggacgtgtttgacctgaagaaatactctgcttcagaggaggcttttctgaggctgctg
ccagtggtcaaaacatccaacaaagctgtgctgagtggctgtaacctgtcagagagaagc
tgtgaagctctgtcctcagctctcagctcccagtcctgcagtctgaaagagttggacctg
agtgacaacaacctgacagactcaggagtgaaacttctgtctgctggactgcagagtcca
aactgtaccctggaaactctcagtctgtcaggctgtctgatctcagaggaaggctgtgtt
tctctggcctcagctctgagctttaacccctcccatctgagagagctggacctgagctac
aatcatccaggagactcaggactgaagctgctgtccgatgggctgcaggatccacactgg
agactagacactctcaggatggaccatggtggagcgcacagactgagacctggtgtgagg
aagtatgaatgtaaactggagctggacacaaacacagtgaacagattcctcagactgttg
gacgacagcacgacggtgagacatgtcagagaggatcagtcgtatcctgatcacccacac
agatttgacttctgtccccagctgctgtgtaggactggtctgactggtcgctgttactgg
gaggtggagtgcagagggtacgtttatatatcagtgagttacagaggaatcaggcgaagt
ggggacggtgaggactgtgtgtttggatggaacgatcagtcgtggagtctgagctgcacc
gggggacgttactctgtcctgcacaagaagaaactaacaaacgtctcttcctcctcttcc
tcttcctcctctgcctcaaggagaatagcagtgtatgtggactgtcctgctggcactctg
tccttctacagagtcgtctctgacttcctggtccacctccacaccttcaacagcaccttc
acgggacctctttatcctggctttacagtctggcctggttcctcagtgtctctgtgtcct
ctgcacatctga
DBGET
integrated database retrieval system
