Epinephelus lanceolatus (giant grouper): 117260519
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Entry
117260519 CDS
T07331
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04120
Ubiquitin mediated proteolysis
ely04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117260519 (syvn1)
04120 Ubiquitin mediated proteolysis
117260519 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117260519 (syvn1)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117260519 (syvn1)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117260519 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
117260519
NCBI-ProteinID:
XP_033488363
LinkDB
All DBs
Position
10:11721100..11734130
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AA seq
633 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGVFPFWGPFPAVPPPAAAAAAPGPTEAPQGSTEATQVAGTSQP
TSSTAEAAAGTAAPGSAIPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLSRLSE
EELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGSTGEASGT
NSTASPPAAGSSTDSPSKEKDSSSSEQADETTVSSQPADSTSTASDTERKEEMDEGAAAV
GDEDGEPNAAELRRRRLRKLETSSPSSPPPPDN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccttggtgactgccaccagtctggcgttgactggggctgtggtggcg
cacgcttacctcctcaaacatcaattctacccgactgtggtctacctcaccaagagcagt
cccagcatggcggtgttgtacattcaggcctttgtgttggtgtttctgctgggaaagttc
atgaggaaggtcttctttggacagctaagggctgcagagatggagcatctgattgagcgc
tcctggtacgctgtgaccgagacgtgcctggcattcactgtgttcagggacgacttctcc
cctcgcttcgtcgccctcttcacactcctgctcttcctcaagtgcttccactggctggct
gaagaccgggtggactttatggaacgtagtccaaacatatcctggatttttcacttcaga
gtgttatctctcatgggactgctggctgtcctggacttcctgtttgtcaaccatgcctgt
cacagcatcattacccgaggagcctcagtccagcttgtttttggatttgagtatgccatc
ctgctgaccatggtgctgacaaccttcattaagtaccttctgcacactattgacctgcag
agtgagaatccctgggacaacaaggccgtctatatgctctacacagagctcttcacaggt
tttatcaaagtgctcctgtacattgccttcatgaccatcatgataaaggtccacaccttc
cccctgtttgccattcggcccatgtatctggctatgaggcagttcaagaaagctgttaca
gatgctataatgtctcggagagccattcgcaacatgaacacactataccctgatgctact
cctgaagatctgcaggcctctgacaacgtctgtatcatctgtcgagaggaaatggtcact
ggagccaagaaactaccttgtaatcacattttccattccagctgcctgcgctcctggttt
cagaggcagcagacctgcccaacctgtcgcatggacgtcctccgtgcatccaataacaat
cagactccagcccctgcccaggccccgccccctgctcctgcggcccctgctaacgccccc
gcagccccacccgccaatgtggctccaggcatgttacctggctttcctcctggcgtcttc
cccttctggggtcccttccctgcagtgcctccccctgctgcagcagctgcagctcctggt
cccactgaagctccacagggcagcacagaggccacacaggtagctggtaccagccagccc
acctcatcgaccgcggaggcagctgcaggcactgctgctccaggatcagcaatcccaggc
ttccccttctccttcccccctccgcccttccccactgcaccatggctgcccatgccacca
cctcctccctttgtgtcgtcaatgcctcctcctcctccgtctctgtcccggctgtcagag
gaggagctgagggagctggaggcggagggtcggcggggcctggaggccaggctccagtgt
ctccagaacattcacactctgctggacgccgccatgctcaacatccatcactacctcagc
acggtcgccacactcactcctcctcgggcagagggcagcactggagaagccagtgggaca
aacagcactgcttcacctcctgcagctggcagtagcacagacagtcccagcaaggagaag
gactcttccagctccgagcaggcggacgaaactacggtctcctctcagccagctgactct
acttctactgcctcggacacagaaagaaaagaggagatggacgaaggagcagcggcggtt
ggggatgaggacggagagcccaacgctgctgagctgaggcgtcgccgccttcgcaagcta
gagacatcatcaccatcatctccaccccctccagacaactga
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