Epinephelus lanceolatus (giant grouper): 117260522
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Entry
117260522 CDS
T07331
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117260522 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117260522 (pitx2)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117260522 (pitx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
XRCC4_C
AATF-Che1
Auxin_canalis
Motif
Other DBs
NCBI-GeneID:
117260522
NCBI-ProteinID:
XP_033488365
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All DBs
Position
10:37881127..37894255
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AA seq
313 aa
AA seq
DB search
MNSMRDPLNIDHHHLTGNKLASAHHTALAMASTLQPLQRSVDSKHRLEVHTVSDTSSPES
VEKEKNQNKNDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWT
NLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNNWAAK
GLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMTSSMVPSAVTGVPGSSLNSLNN
LNNLSNPSLNSGVPSSACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPAT
NLSACQYAVDRPV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatgagggatccattaaacatagaccaccaccacctaacagggaataaactt
gcctccgcgcaccacacggctctggcgatggcctccactttacagccgctgcagcggtct
gtggactcgaaacaccggttagaggtgcacacggtgtcggacacatccagtccggagtca
gtcgaaaaagaaaagaaccaaaataaaaacgacgactcgtcagacgacccctccaaaaag
aagcggcagcggcggcagaggactcacttcaccagccagcagctgcaggaactggaggcc
actttccagcggaatcgctatccggacatgagcacgagggaggagatagccgtgtggacc
aacctcacagaggcccgggtcagggtttggttcaagaaccggcgagccaagtggaggaaa
cgggaaagaaatcaacaagccgagctctgcaaaaacggcttcggcccgcagttcaacgga
ctcatgcagccctacgacgacatgtaccccagctatacgtacaacaactgggccgccaag
ggcctgacgtcggcctctttatccaccaaaagcttccccttcttcaactccatgaacgtc
aaccccctgtcttcgcagaccatgttctcgccgcccaactctatatcctccatgacttcc
agcatggtgccgtcggcggtcaccggcgtgccgggctccagcctcaacagcctcaataac
ttgaacaacctcagtaacccgtctctcaactccggggtgccctcctcggcgtgtccctac
gcgccgccgacccctccttatgtgtacagggacacttgtaactccagcctggccagcctg
agactgaaagccaagcagcactcgagttttggatacgccagtgtgcagaatccggccact
aatctgagcgcttgccaatacgccgtggacagaccagtctaa
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integrated database retrieval system
