Epinephelus lanceolatus (giant grouper): 117260932
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Entry
117260932 CDS
T07331
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117260932
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
117260932
NCBI-ProteinID:
XP_033488964
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Position
10:complement(21605467..21621121)
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AA seq
1181 aa
AA seq
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MEMEKGHTSIRRGVSWSPGGLRKPLQATQNMHTPGTECNASWETTGFNKEQMSRKTNLTR
SASLSEKELKEARVRSQIIAAQLTVPSNSSSRGVQLFNRRKQRVNAFTLESCGEGSEEDR
AENVKTEPSSNKLTWAERSTEEKDRVLNFKNSASKPLLSPPGTHSVGDIMEEPSKDFHKE
EDMEDSVIQERHFLPVKEEQEEEEEARDRIHEELEDKNKDEIPPGSNKTGPVLMGHAEGQ
AEINGVQTGPVPPGKLHNGCHSTSGPERVSAPTTKQTSTIINRTARPFFSPLTVQSPEAA
SPVTEIPPPPSYATPPLPSFTAPQPSAFSPPPPPPSYPTPPLPAFTNQPPQTYYSSPSPM
SPVMSPPPSQYPMPSVSQYPPMPHYGPPTAPKPSTFVPQPAGERKPIIQIKTGILEEGAA
RRGSRKSMFTFKEKTVVAPNPELLSLVQGADERKKHGQRSVPEPASEEELLALGAEASNF
LAKEEERAEEAIAPEWASCLKTSRTRPRAEHRPEQTLTNVSGKGAELFAKRQSRMEKYVI
EKQNAGQRRSPSPTMSLPPSWVYPSNMPGRVKAMAKNSDMSAQVSQNVKAQQAVKQKPRQ
RAPAPEPIPEPPPLENGCSKIEMDLSRHRPYQLSSSLFILNPVKDPMSTLPKGAPQSKNL
ISTQPFSRQTSLPNNPPSHFSAQCMSPQLPLSPTGGGAEYPPNPAYGQPRISSPAFSPER
VSSPRSGIQAPRPKFSAKNAGITPQTPKDSSPAETPTETPTPTWTPSLTRRFSSPEGPTG
AWTPSLQSNRPSTTISSRSVTSPVSSPRGTRCQSPMASQNIQFSTATSTAASRPPQTSAA
SRRSPWGSRCQSPVVSQNTQSSSISSTPGFRQSQTSTATSPLSPPWGSRSQSPMVSQNTQ
SSSISSTPGFRPSQTSTTTSPPWSSRCQSPMVSQHTQSSTVTSTSTPRPSQTSTATSPRS
PWGSRCQSPMVSQNTQSSTISFVPSSRPSQTSTVTSPVSPPWGSRSQSPALSHTSLSFST
TKPLYTSSATSPPPKDSRCMSPIINNPDSKANHRLLAKNIINAAKRKNSPSPGALSGHSL
PISPLGNSHHGYDCHKPPISPFQSRAFEAQSPTFTSPPQTPTQRICSPVRLYNTRSLTDS
DASVESEDSGLRSPGLHSYNTCPRGWGGSLRVKRSTVSTDL
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagaagggacatacatctatcaggagaggagtgagctggagcccaggagga
ttgagaaaacctctacaggcaacgcaaaacatgcatacccctgggacagagtgcaatgca
tcatgggagacgacaggattcaacaaagaacagatgagccggaaaacaaatctgaccagg
agcgccagtttatcagagaaggagctaaaggaggctcgtgtcaggagtcagatcatcgct
gctcagctcacagtcccttccaactccagctccagaggcgtgcagctcttcaaccggcgc
aagcagagagtcaacgccttcacgcttgaaagctgtggagaggggtcagaagaggacaga
gctgagaatgtgaaaacagaaccctcatctaacaaactaacatgggcagagaggagtact
gaggaaaaggatagagtcctgaactttaagaatagcgctagcaagccccttttgtcacca
cctgggacacattcagtaggtgatatcatggaggagccgagtaaggatttccacaaggaa
gaggacatggaagacagtgttatccaagagagacatttccttcctgtcaaggaagagcag
gaggaagaggaggaggcaagagatagaatccacgaggagcttgaggacaaaaacaaggat
gagattccccctggaagtaataaaactggtccagttctgatggggcatgctgaggggcag
gcagagataaatggggtccaaacagggccagttccccctggaaagcttcataatggctgc
cacagtacttctggacctgagcgggtgtctgcgcccacaaccaaacagacaagcaccatc
attaatcggactgccaggccctttttttcaccgctgacagtgcagtctccagaggcagcc
agccctgtcacagagatcccccctcctccttcttacgccactcctcctcttccttctttc
actgctccccaaccttcggcgttctcaccaccccctcctcctccgtcataccccacacct
cctttaccagcctttacaaaccaacctccgcagacctactactccagtccatctccgatg
tctcctgtcatgtcccctccaccatcccagtaccctatgccttctgtatctcagtaccca
cccatgccccattacggccctcccacagccccaaagccctccaccttcgttcctcagcct
gctggagagaggaagccgataatacaaattaaaacaggaatactggaggagggtgctgct
agaaggggaagtaggaagtcaatgttcacattcaaagagaagaccgtggtagctccgaac
cctgagctgctctccttggtgcagggggcggatgaaaggaagaaacacggacaaagatct
gtgcctgagccagcatctgaagaagagctattggcgctaggtgcagaggcctccaacttt
cttgccaaggaggaggaaagggccgaggaggcaatagcaccagagtgggcttcctgcctc
aagacctccaggacccgtccgagggcagagcacaggccggagcagaccctcaccaatgta
tcaggaaagggggctgaactgtttgccaagcgtcagtccaggatggagaaatatgtcatt
gagaagcaaaatgcaggacaaaggaggtctccttctcctacaatgtcgctgccaccatct
tgggtgtacccatcaaacatgcccggcagggtcaaagccatggctaaaaactctgacatg
agcgctcaagtttcacaaaacgtaaaggcccaacaagcagtcaagcaaaaaccaaggcaa
agagctccagcgccagagccaattccagaacctcctcctctagaaaacggctgctccaag
atagagatggacttgtcaaggcaccggccctaccagctttcatcttccctcttcatcctt
aacccagtcaaggaccccatgagtaccctacccaaaggagcgccacagtccaagaacctg
atatctacccagcctttctctcgacagacctccttacctaataaccctccttctcacttc
agtgcccagtgtatgtctccacagctgcccctcagccccacaggaggaggagcagaatat
ccaccaaatccagcgtatgggcagccaaggatcagctctccagccttttctccagagcga
gtatcctctcctcggtcagggatccaggcaccgaggcccaaattttctgccaagaatgca
gggattacaccgcagacaccaaaggattcctcaccagctgaaacccccactgagactcct
acgccaacctggacgcccagcctcaccagacgtttcagcagcccagagggccccactggg
gcctggactcccagcctccaaagtaatcggccctccaccaccatctccagtcgctccgtt
acttcccctgtatcctctcccaggggcacaagatgccaatcccctatggccagtcagaat
atccagttttccactgctacctccactgcagcatccagacccccccaaacatcagccgcg
tctcgacgctctccgtggggttcaagatgtcagtccccagtggtgagccagaatactcag
tcctccagcatctcctccacacctggtttcagacaatcccaaacttctacagctacttct
ccgctttctcctccttggggttcaagatctcagtccccaatggtgagccagaatactcag
tcttccagcatctcctccacacctggtttcagaccatcccaaacttctacgactacttct
cctccttggagttcaagatgccagtccccaatggtaagccaacatactcagtcttccact
gtcacctccacgtcaacacccagaccctcccagacatctacagccacatcccctcgctct
ccttggggatcaagatgccagtcccctatggtgagccaaaatacccagtcttccaccatc
tcctttgttccctcatccagaccatcccaaacatccacagtcacatctcctgtctctcct
ccctggggctcacgttcccagtctcctgcactctctcataccagtttgtccttctccacc
actaaacctctgtacacatcttctgccacctcacccccacccaaagacagtcgctgcatg
tcccccattattaacaacccagactctaaagccaaccatcgtctgctggccaagaacatc
atcaatgcagccaaacgtaaaaacagcccctcccctggagcactgagcggtcacagcctc
cccatctcacctctgggaaattcccaccatggctatgactgtcacaaaccacccatcagc
cctttccagtcacgggcatttgaggcccagtcccctaccttcaccagccctccccaaacc
cccacacagaggatctgctctcctgtgaggctctacaacactcggtctctcaccgactct
gatgcctctgttgagtctgaagactcaggcctccgatcgcctggcctgcactcctacaac
acctgcccccgcggctggggaggtagcctgagggtgaagcgaagcaccgtctccactgac
ctgtga
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