Epinephelus lanceolatus (giant grouper): 117261010
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Entry
117261010 CDS
T07331
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ely04990
]
117261010
Domain-containing proteins not elsewhere classified [BR:
ely04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
117261010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
117261010
NCBI-ProteinID:
XP_033489075
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All DBs
Position
10:complement(40316963..40437750)
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AA seq
1263 aa
AA seq
DB search
MASPVADIGQSHQHHPVTESAAESAFQEAQKWIEAVTGRCFGDKDFRGGLENGILLCELL
SSIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPTAKGSD
CSRKLKNVLITIYWLGRAANSCTSYNGPTLDLKEFEGLLSQMRKEADEAESPKRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSQQTPSPDVLVARGSSDGRGSDSESDG
PPHRKMPDVRKDDMSARRTSVSELRTAMPFNQYLPNKSNQSGYVPTPLRKKKNDKEEGAR
KSWSTATSPVGGDRPFSTPARSCSEDFFHHSTTLAANAAATPVDAASPVITSGQHPPVTE
QKGAAAVPSVDAEKAGQTPARPSPKHITAPSPPHFLPLPAATATVTTATTDTGRRKGRAL
SESDDSQGGSSWMDSSLPATFSRTHSVSDDPQSVSMIDMRGEEEAILQPHSQVRHELMHN
QYNRMKEEDDHWQDDLARWKNRRRSISQDLIKKEEERKMMERLMSGESCVSQRRRSIKTY
REIVEEKERREDELRDAYRRARTPEEAAIILQRYAQRFSISEAVLERLHLPKLLDRSISA
DPSFPPSAFPLSLSLSASPTTPDPFDMDPNGPMRYLRQQSAPAPKFTSTLEARIEEFPKD
SSHQRPQIRSRSSEPPSNRNLSPKPVPLLTPKPYFQSRPTAADPWPSKTDGLLRVNGDIG
SDDVPATPESQGRESPPHFEASPSKTSNSTVDAPSSASPTHTSTRGESPVSTKAEEAPSA
TEAASQDVQEEKVTEHSTPPSRPTSLPSELQKPEESFGKTGSQSVAATEEETSNAAAQQR
SPAEAKQEQKKPEPSGQNISNLVQSGVSTQQSQPVVSQASALSSQESSLRRENVPSLAAP
GSFEYHPPRETTAEFANSVRSPLATSNPKLRWEFFVPPEEKEKDRRGNVSVPVLPQAKRA
DRWSWDPDEERKRQERWQQEQERMLQEKYQREQEKLKEEWERAQREVAEEERKYHEEERR
ILEETVAPLTPRSSALPSPSRGEISSTSEPQDTIVRSLADWERKQELLERQSRGSTENVE
WKRRENDRTSDISTADDSMKTGRSSMSSSQVETVGHSLQNGQKQPTKTSTPVKKQEQPSA
DSNKPSRPAGDRRSGPIDNNMCRSSSKPPAACPPPSDTLPPAPNRSVSGKKLCSSCGQPL
GKGAAMIIETLSLYFHIHCFKCGVCKGQLGDTTTGTDVRIRNGLLNCHQCYIRSRSAGQP
TTL
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggttgcagacataggacagtctcatcagcatcaccctgtgaccgagtcg
gccgcagagtccgcgtttcaggaggcgcagaaatggatagaggctgtgacaggaagatgc
tttggtgacaaggacttcagaggaggtttggagaatgggatactgctatgcgagttgctg
agctctattaaacctggcctggtgaagaaaattaacagacttccaacacccatagctggc
ctggacaacctcagtgtgtttctgcgcggctgcgaggagttgggactgaaaggctcccag
ctgtttgaccctggagatctgcaggacacgtcaacacgccccactgccaagggaagtgac
tgcagccgaaagctcaagaatgttttaatcaccatctactggttgggtcgtgctgccaac
agctgtacctcctacaacggtcccacactggacctgaaagagtttgagggcctgctgtca
cagatgcgaaaggaggcagacgaggcagagagccctaaacgcagcatccgggacagcggc
tacatcgactgctgggactctgagcgcagcgactctctctccccgccacgccacggccgc
gaggactcgttcgacagcctggactccttcggctcacgctcacaacaaaccccgtcgccg
gacgtcctggtcgcccgcggcagtagtgatggccgcggcagtgactcagagtccgacggt
cctcctcacaggaagatgccagacgtccgaaaggatgacatgtcggcacggcggacgtcc
gtcagcgagctacgaactgccatgccctttaaccagtacctgcccaacaagagtaaccag
agtggatatgtgcccacaccactccggaagaagaagaacgataaagaggagggagcacgc
aagagttggagtactgctacctcccctgtaggaggagacagaccattcagtactccagct
cgctcgtgctcagaggatttcttccaccattcaacgactctcgcagcaaatgctgcggca
acccccgtggacgcagcaagccccgtcatcacgtcagggcaacatccacctgtgacggag
cagaagggagctgctgctgtcccgtcagtcgatgcagagaaggccggccaaacacccgcc
agaccctctcccaaacacatcacagccccgagtccccctcacttccttcctttgcctgcc
gccacggcaaccgttacaacagcaacaaccgatacaggccgacggaagggaagggcactg
agcgaaagtgacgactcacagggagggagctcttggatggacagcagtcttccagcaaca
ttcagccgcacacatagtgtgtcagatgacccgcagagtgtgagtatgatcgacatgcgt
ggtgaggaggaggccatcttgcagcctcacagtcaggtgcgtcatgaactgatgcacaac
cagtataacaggatgaaggaagaagacgatcactggcaggacgacctggcccgatggaaa
aatcggaggaggagtatttcccaagacctgatcaagaaggaggaggagaggaagatgatg
gagcggttgatgtcgggagaaagctgtgtctctcagaggaggagaagcatcaagacctac
agagagatagtggaggagaaggagcgtcgtgaggatgagctgcgggacgcgtacaggaga
gccagaaccccagaagaggcagcaatcatcctccaacgttacgcccaacgtttctccatc
agtgaagcagtcctggaacgcctacacctgccaaagctcctggaccgcagcatatctgct
gatccctcctttcccccatcagctttccctctctccctctccctgtccgcctccccaaca
accccagaccccttcgacatggaccccaacgggcccatgaggtatctgcgccagcagtcc
gccccggctccgaagttcacgtccacactggaggcgcgaatcgaggagtttcccaaagac
tcctcacaccagcggcctcagattcgctcccgctcatctgagccgccatccaaccggaat
ctgtcgcccaaaccggtgcctttgctgacacccaagccttacttccagtcacgacccaca
gcagctgacccatggcccagtaagacggatggtttgctccgagtcaacggtgacataggg
agtgacgacgttcccgccacgcccgagagtcaaggaagagagtctcctcctcatttcgag
gcatccccttctaaaaccagcaacagcactgtagatgctccgtcgtcagcctcaccaaca
cacacctcaaccagaggagaaagccccgtgtcaacaaaggccgaggaggcaccaagtgcc
acagaggcggcttcgcaggacgtgcaagaagagaaagtcactgagcattcgacgccaccc
agccgacccacctcactcccatcggagctgcagaagccagaagaaagctttggaaagact
gggagccagtcagtagctgctacagaagaggagacatcaaatgctgcagctcagcaaagg
tcacctgcagaagccaaacaagaacaaaaaaaacctgaaccatcaggtcaaaacatttcc
aaccttgtccagtcaggagtcagcacgcagcaaagtcagccagtagtttcacaggcgagt
gctctcagttcccaggagtcgtcactgaggagagaaaatgtaccaagcttagctgcacca
ggatcatttgaatatcacccaccaagggaaacaacagcagagtttgcaaacagtgtcagg
tctccactggcaaccagcaatcctaagttacgctgggagttcttcgttccaccagaagag
aaggagaaggatcgccgtggaaacgtgtcagtgccggtgttgccccaggccaagcgggct
gaccgctggtcttgggacccggatgaggagcgaaagcgtcaggaaaggtggcagcaagag
caggagcgcatgctgcaggagaagtaccagcgtgagcaggagaagctgaaggaggagtgg
gagagagcacagagggaagtggcggaagaggagaggaagtaccatgaggaggagcgaagg
atactggaggaaactgtagcgcctctgactccccgctcctcagccctgccctcccccagc
cgaggggagatctcctccacctcagagccccaggacaccatcgtccgttcgctggccgac
tgggaacgcaagcaggaactgctggagaggcaatcgagggggagcacagagaatgtcgaa
tggaagcggagagaaaacgacaggaccagtgacatcagcactgctgacgacagcatgaag
acaggcagaagctcgatgagcagcagtcaggtagagacagtcggtcacagtctacagaac
ggacaaaaacagccgaccaaaacctcgactccagtgaagaagcaggaacagccttcagca
gacagcaacaagcccagccggcctgcaggagacaggaggagtggtcccattgacaataac
atgtgccgcagctcatcaaaaccccccgcagcatgtccaccaccttcagacacactgcct
ccagcacccaacaggtctgtcagtgggaagaagctgtgctccagctgtgggcagccgttg
gggaagggagcggccatgatcatagagaccctaagtctttatttccacattcactgcttt
aagtgtggggtgtgtaagggacagttaggcgacacgaccacagggacggacgtccggatc
agaaatggcctcctcaactgccatcagtgctacatccgctcccgctcggccggacagcca
accacgttgtga
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