Epinephelus lanceolatus (giant grouper): 117261176
Help
Entry
117261176 CDS
T07331
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117261176 (rlim)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117261176 (rlim)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117261176 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117261176
NCBI-ProteinID:
XP_033489352
LinkDB
All DBs
Position
10:complement(23729287..23736166)
Genome browser
AA seq
674 aa
AA seq
DB search
MEGSDSSEQSGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNSTSAPSTENGEDPVEPPENPEDPANGDSLLDWLNTVRRTG
NTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQEPPQESSQESP
EGQEVVANAEPQVPMETEVVEEPVVEELAVIVEPEPEPVPEPVLEPEPEPEPEPVPEPEP
ELEEVVSQEILGERPSSPAALPVQPPLSPSPRRGQRRARSRSPEPRRTRARTARSRSPLN
LDQLDGLPNSRHAHSSQGISSSTSVSPVPQVEGSSRTRQHVLSRQSTADSDVQPSRAGEE
MVPEAQNVGSQEGEAPGGEGGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQN
SNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQI
MTGFGELGYLMDSDSDSSDSNRGANTPADLAEALNNPDAPPAAAPIADVDEPPVAAGVRA
RTAETDIDEGLAAAPPASGGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTK
EQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPIC
RRAVLVSANRESVV
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctgacagttctgagcagagtggcagtgaccagccagagtcacagcgcaga
aggcagctggaccgcctggacagggaggaggccttttaccagtttgtcaacaatctgagt
gatgaggactatcgtctcatgagagacaacaatcttttgggcactccaggagaagtaacg
gaggatgagctgtttagcagacttcagcaaatcaaggatggtccagaacagcagaataac
agtactagtgcccccagtactgaaaatggagaagatccagttgaaccaccagaaaaccct
gaggatcctgccaatggggatagtctcttagactggctgaacacagtgaggcgcacaggc
aacactaccagaactggtcatcgcggaaaccagtcatggcgggccgtaagccagaccaac
ccaaacagtggggattttcgcttcagcctcgaaatcagtgtgaatcggaacctggctgaa
cagcaggcagctgctgaaggggagcaggagcctccacaggagtcttcccaggaatctcca
gagggtcaagaagtggtggcaaatgctgaaccgcaggtgcctatggagacagaagtggtg
gaggaaccagtagtagaggaattggctgtcatagtggagccagagcctgagccagtgcct
gagcctgtgcttgagcctgagcctgagcctgagccagagcctgtgcctgagccggagcct
gaactagaagaagttgtttcacaagagattttaggagaacgtcccagctcacctgctgcc
ctgcctgtacaacccccactttctccttctccacgtagaggacaaaggagagcccgcagc
cgtagtccagagccacgcaggactagggcccgtacagccaggagccgttcccctctcaat
ctggatcagctggatggtctccctaattcacgtcatgctcactcctctcaaggcatcagc
tcttccaccagtgtctcccctgtgcctcaggtggagggcagctctcggactcgacaacat
gttctttctaggcaaagcactgctgacagtgatgttcagccatctagagctggcgaagaa
atggtccctgaggcccaaaatgtaggatctcaggaaggagaagctcctgggggtgaaggg
ggtgcagcagggcgccgtccccctactattatgcttgatctccaggtgcgtcgtgtgcgt
ccaggcgaatatcgccaaagagacagcattgctagtcgcacccgttcacgctcccagaac
tcaaacaacacatttctttacgaaagtgagcgtggtggatttcgtaggactttctcacgc
tctgagcgtgctggtgtgaggacctacgtcagcactattcgcatacctatccgaagaatc
tccgatgcaggtttgggagaggcaacctcaatggctctccagtctatgattaggcagatt
atgactggttttggtgaactcggctacctcatggattcagattctgattcttcagattca
aaccgcggagccaacacacctgcggatctggctgaagccctcaataacccagatgctcct
cctgctgctgctcctattgctgatgttgatgaaccacctgtggctgctggagtcagagca
aggacagctgagactgatattgatgagggccttgccgctgctccacctgcctctggtggc
agggcccgacctagaccacctatcagcctagaggagcccagctcactgcccttccttcgg
cttgcccatttcttcctcctaaatgacgacgacgaggaccagccccaagggttgaccaaa
gagcagattgacaacctctcaatgcgcaactttggtgagagtgatgccttgaagacttgc
agtgtctgcataacagaatatgcagaaggtaacaagctacgtaagctgccctgctcacat
gagtaccacgtgcactgcattgatcgctggctatcggaaaactccacttgccccatctgc
cgcagggctgtcttggtatcagccaaccgagagagtgtggtgtag
DBGET
integrated database retrieval system
