Epinephelus lanceolatus (giant grouper): 117261207
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Entry
117261207 CDS
T07331
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117261207
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ely01009
]
117261207
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117261207
Protein phosphatases and associated proteins [BR:
ely01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117261207
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Protocadherins
117261207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
PepSY
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
117261207
NCBI-ProteinID:
XP_033489413
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All DBs
Position
10:46412068..46445978
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AA seq
1019 aa
AA seq
DB search
MAALRWEVLLFLVVVLLVSCSAASTDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE
VGSPYLRVDGKTGDIYTTEIPIDRETLRDCRNLFEGDKCFLEFEVSITDMVKGIGSGPRL
IEGRIEVMDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDRDSGTNGVAEYSLSTGP
DADQLFSLQVAVDSDEKLPQLVVMGNLDREKKDSYDLNIRVVDGGKPARASSALLRVTVT
DQNDNSPKFERSHYEAELPENSPQGHSVLQVRANDADTGSNGEIDYSLHQVTEAVQRLLR
IDRSTGIIYVKGLVDREEESFLKFFVVAKDRGPNSKSTKVLVNISVKDVNDNAPAIEIRG
IGLVTHQDGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND
RKRKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSSTNSLRVQVTDMNDNTPVFSPAML
EVDFPEGNQPGDRVLDITATDADSGTNAELVYSIIELSATRLFEIDADTGEIRVKNLLDR
EETERYEFRVAAADKGVPSKTGTATLVINVLDRNDNDPKFMLSSYSFSVIENMPPLNPVG
VVTVTDADKGENARVKLYVEQDNSKFVIQNGTGTILSSISFDREKESTYTFRLKAVDAGD
PPRSSYVGVTINVLDENDNAPYVTKPANSSYTYMSPVTPPDTSVEVVEAEDIDSGPNAEL
VYTITGGNPYGLFHISPNSGEITLVQEFTGKHNGLHRLVVRVSDKGKPPRHTTALVHVFV
NDTKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGVAGVILVIVAVVV
IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQK
GLKFNLINDNVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSSKQVGDYANTAMYHRDIHWTNGVW
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgaggtgggaggttctgctgttcctggtggtcgtcctgctggtctcctgc
agtgccgcgtccaccgacatcctgtatcgggttcctgaggagcagccgcccaacacactg
attggcagcctggcggcggaccagggcctgcccgacaccggccacctctacaagctggag
gtgggctctccgtacctgcgggtggacggcaagaccggcgacatctacaccactgagatc
cccattgaccgcgagacgctgagggactgccgcaacctgttcgagggcgacaaatgcttc
ctggagttcgaggtgtcaatcaccgacatggtgaaagggatcggctcggggccgcggctg
atagagggccgcatcgaggtgatggacatcaacgacaacacgccacagttctcctcgccc
atcctcaccctgtccatccctgagaacacgcacatcggcgccctcttctccatccccatg
gccaccgacagggactctggcaccaatggtgtggccgagtactcgctgagcactgggcct
gacgctgaccagctcttcagcctgcaggtcgcagtggactctgacgagaagctgcctcag
ctggtcgtcatgggcaacctggatcgtgagaagaaggactcgtatgacctgaacatccgg
gtggtggacggagggaagccggcaagagcgagcagtgcgctgctgcgggtcaccgtcacc
gaccagaacgacaactcgccaaagtttgagcggagtcactacgaggccgaactgccggag
aacagcccgcagggacactctgtgctgcaggtcagagccaacgacgcggacaccggctcc
aatggggagatcgactacagcctccatcaggtgacggaggccgtccagaggcttctgcgc
atcgaccgctctactggcatcatctacgttaagggcctggtggaccgcgaggaggagagc
tttctcaagttctttgtggtcgccaaagatcgtgggcccaactccaagagcaccaaggtc
ctggtgaacatcagcgtcaaggatgtgaacgacaacgcacccgccatcgagatccgtggt
atcggcttggtgacacaccaggatggcgtggccaacatttctgaggacatgcccatcggc
acgccggtggcattggtccaggtgtcggaccgtgacgagggggaaaacgcggtggtgact
tgtgtggttgccggcgacgtcccgtttcagctccgacctgcgagtgagtcggccaacgac
cggaagaggaagtacttcctgcagacaacgaccctgctggattatgagcgtgtgaaggat
tacaggattgaaatcgtcgcagtggattctgggaacccggccctgtccagcaccaactcc
ctcagagtgcaggtcacggacatgaacgacaacacgccagtcttttcacctgccatgctt
gaggtggactttccagagggcaatcagccgggtgacagggtgttggacatcactgcgaca
gacgctgacagcggcaccaacgcagagctggtctacagcatcatcgagctgtcggccacc
aggctatttgaaattgatgccgacaccggagaaattcgagtgaagaacctgctggatcgg
gaagagacggagcgttacgagttccgcgtggcggcggcagataagggtgttcccagcaaa
actggcaccgctacattggtgattaatgttctggaccgcaatgacaacgatcccaagttt
atgctgagcagctacagcttctccgtcatcgagaacatgcctccactcaatcccgttggc
gtggtgactgtcactgatgctgataagggtgagaacgcccgcgtgaagctgtatgtggaa
caggacaacagcaagtttgtcatccagaacggcaccggcaccatcctgtccagcatctcc
ttcgaccgtgagaaggagagcacctacaccttccgcctgaaggccgtggacgctggtgac
ccacctcgatcgtcctacgtgggtgtgaccatcaacgtcctggacgagaacgataacgcc
ccctacgtcaccaaaccggcaaactcctcctacacgtacatgtcccccgtcaccccgcca
gacaccagcgttgaggtggtggaggctgaggacattgactctggacccaacgctgagctg
gtctacaccatcacaggtggcaacccgtacggcctgttccacatctcgccaaacagcggg
gagatcacgctggtgcaggagttcaccggcaagcacaacgggctgcaccgcctggtggtg
agggtcagcgataaaggcaaacctccccgccacaccaccgccctggtccacgtctttgtc
aacgataccaagtctaacgtctccctcatcgaggcgctggtcgggcacagcctctacacc
cctctggacagggacattgccggagatcccaactacgccctcgcacagcgcagcaacatc
ctgtacggcagcctggcgggggtcgcaggcgtgattcttgtcatcgtagccgtggtggtc
atcagacaccgactgcagaaggacacaaagagcggttaccaggccggcaagaaggagagc
aaggacctgtacgcgcccaagcagggccccaaaaacggcaaaggcaaaaagagcaagaaa
ggaaaagctcccaaaccggcgaagccgctggaggaggacgaggaggcgagcctgcagaaa
ggcctcaagttcaacctcatcaacgacaacgtcaacgacagtcccagaatccacctgccc
ctcaactacccgccaggaagccccgacctgggccgccactaccgctccaactccccgctg
ccctccatccagctgcagccgcagtcgccctccgcctccaagaagcaccaggccgttcag
gacctccccgccaccaacaccttcgtgggaacgggcgacaacaactccacgggctccgac
caatattcggattacagctacaaggccaacccgcccaaatacagcagcaaacaggtagga
gactacgcaaacacggccatgtaccacagggacatccattggaccaacggggtgtggtag
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