Epinephelus lanceolatus (giant grouper): 117261208
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Entry
117261208 CDS
T07331
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117261208 (sh3tc2)
Membrane trafficking [BR:
ely04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117261208 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
SH3_2
TPR_2
TPR_1
SH3_1
SH3_9
TPR_MalT
TPR_10
SNAP
TPR_7
Motif
Other DBs
NCBI-GeneID:
117261208
NCBI-ProteinID:
XP_033489415
LinkDB
All DBs
Position
10:20411717..20435004
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AA seq
1583 aa
AA seq
DB search
MALISGSCRLLGQMASCCCRPLLNSCCCGPFIKVCLSSFTDISPAELDALWREPPYTLGG
ANEHFPGNDIMTQGAGEEEDGPVVESGEGGVEPDSYWKKKEAFLRGSTVSLGEKFSSEIV
LLFTGRRRSSVAPDRALQEALRTRLRVVESNSQDVIQLFKDLSARLVCVHAEKDSFVLTF
KTVEEIWKFSTYLALGFVARCLENFLCDQSFWLDPELLSDLQISVTVDEEHLATLYLGLL
LQEGSFFAKALFTRSEQDEDDEEQLSFKKNDLLMVRDTGQDNMWEGTMLSTGNHGLVPLN
AMQPLPYPFYQWFLRKYPGNAGCSPAEKEPFEHSIVTGSCVAVVDYSPVGPDELQLSQGD
IVEIQGLLVRGLGVFIGTHTSTGHTGFVHKAHVKPLDTEPLDARLVFLTEEERASLAQVN
PCSSEPSDSGLLERLFSTDISSVYRLDRLDETDFMYIRNRPKHELKIPASARQSVMSEKS
GGTPPYHSSPRASLSHSSPRLSLYQSHNPLPREGERLSFTLDDTFREMDEFQEDPPLFLE
ENSWEGEDSEFSDPTLTLLNHEHFQEDFLPLYDLQYSFLWVTFSGKTEDELSGHLESVRE
CAKRMGLHWAHRRACFLLGRLCARKLKFSQARVYYEEALSVRVDSFSDTPLLIALFTNLT
AVYLKQRMTDKLPQTLEKASALLLCLPCHTFTSTDELELLQLLLRRSVVMGDKHLEARVC
YLVSSLFLFLRKTDDALPFVERLQFLAVTFSATNGAPIAPLDLNWLLSWLYHRKYMPYLA
LASLSLDSRQDHSLHDAFQRIELFIRNSVRLNPCWREGTSLLPAQIVIYLQQALIIAEQG
EDMKTQRDLCQGLATVYQQYDALDKAVRCAQQAVETGGHINEEESFEASVLLGWLLVLTG
QAERAQNVLQPLLTSLQGTDSPTQRGVIHNLLALCLRRQGRIPEAGWHLHSALLISRESG
NQRNQALALANLGCLALDVGASTVAERFLVRSLRLFLELWESPTDEEHVQTYLWLGRSYK
DRRKSQDSRACYEMGLLIALHARNLHSQMVVAKVLSRLYDDMLLYGQSIVYYEHCVSVSR
ELKDKRLEGEYLEILSSLYLSLNTEKSSRKSLDYTKQSLRISIDLGKREEESETWLQVGR
IYYLIQEDELADMYLQAAVKTALRMNDHHFAMNIYEEAGDVYFKGHRNRMASLPFYRDGS
LPFARSIRDVHSEFRLLSKLTELLMTQGEQEEALQYATLAVQITGKTGVQVNERTAYHRL
ATVYYNLQQYEMAENYYLKSLSLCPPVLQDPMEARYYTKVYCRLGNLTLHKLKDSFDAVG
YFQLALAAALEDQSNPEALYVVYMKLAEIHGNHMPDPQLCQVYRDRAQSLKRILAGEEGA
AVVEENMADADTELGQKKEEDSGADMERTESLVKRNGVFTSTPENKKRDDNSFPRTSFIS
EDKEDRHADTDTGDTNGKDHSNNLDADGPFVDAFDTQTIASQSYSDSILTESFDTAKEQI
SDSSSSTDTLQTYQNQTDGTDFDTDHSMPSQIHISDITRHRGSHNTDSDIQDEQNTPTKG
THTDPFQKDVSDEDNQSDINRDC
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagctgccggctcctgggccagatggcgtcttgttgctgcaga
ccgctgctcaactcctgctgctgtggaccgttcatcaaagtctgcctctcctccttcaca
gacatctctcctgctgagctggatgctctttggagggaaccaccgtatactctcggggga
gcaaatgagcacttcccaggaaatgacatcatgactcaaggtgcaggtgaggaggaggat
ggtccagtggtggagtcaggtgaaggaggggtggagcctgacagctactggaaaaagaag
gaagccttcctcagaggaagcactgtctcgctgggagagaaattctcatcagaaattgtg
ctgctgttcactgggcggaggcgctccagtgtggctcctgaccgagccctacaggaggcg
ctgcgcacccgactccgagtggtggagagcaacagccaagacgtcatccagctctttaaa
gacttgtctgcacgtctggtttgtgtccacgctgagaaggatagctttgtgctcacattt
aagactgtggaggaaatatggaagttttcaacttacctagcattaggttttgtggctcgc
tgcttggagaacttcctgtgtgatcagtccttctggctggacccagagctgctcagtgac
ctacagatcagtgtaactgtggacgaagaacatctggcaaccctctacctgggactgtta
ctccaggagggatccttctttgccaaggcgctattcacaagaagcgagcaggatgaggac
gacgaagagcagctgtcgttcaaaaagaatgacttgctgatggtgagggacacggggcag
gacaacatgtgggagggcaccatgctctccacaggaaaccacggcctggttccactcaac
gccatgcaaccgctgccttaccccttctatcagtggttcctgaggaagtacccgggcaat
gctggatgctcaccagcagaaaaggaaccattcgaacattcaattgtgacaggttcctgt
gtagcagtagtcgactacagtccagttggcccagatgagcttcagctgagtcaaggtgac
attgtggagatccagggtcttctagtccgaggcctgggtgtgttcattggaacacacact
tccacaggtcacactggttttgtacacaaggcccacgtcaagccactggacaccgaaccc
ctagacgcacggttggtctttctgactgaggaggagagggccagccttgctcaagttaac
ccgtgtagctctgagccaagtgacagcggcctgctggaaagactcttctcgaccgacatc
agctctgtgtacaggctagacagactggacgagactgacttcatgtacatcaggaatcgg
ccaaaacatgaacttaagattcctgcaagcgctcgtcagagcgtcatgtcagagaaaagt
ggaggaacgccgccgtatcactcctctcctcgcgcctctctctctcattcctcccctcgt
ctgtccctctatcagtcccacaatcctctaccacgtgagggagagcgcctgtcctttact
ctggatgacacattcagagagatggatgagttccaggaagacccacctctcttcttggag
gagaacagctgggagggggaggactcagagttcagtgacccgacactgaccctgctgaac
cacgaacacttccaggaggacttcctgccgctgtacgacctgcagtattccttcctgtgg
gtgaccttcagcggtaagactgaggacgagctatcggggcacctggagagtgtcagggag
tgcgccaagaggatgggcctgcactgggcacatcgacgggcatgcttcctcctggggaga
ctctgtgccaggaagctgaagttctcccaggcccgtgtgtactacgaggaggctctcagt
gttcgtgtggacagtttctctgacacgccgctcctcatcgctcttttcacaaacctcact
gccgtttacctgaagcagcgtatgaccgacaaactgccgcagactctggagaaggcgagt
gccctgctcctgtgtctcccctgccacaccttcacctccaccgacgagcttgagctgctg
cagctgctcctgaggagatcggtggtgatgggggacaaacacctggaggctcgtgtctgc
taccttgtgtccagcctcttcctgtttctcaggaagactgatgacgcccttcccttcgtt
gagcgactccagtttctcgctgtgactttctctgccaccaatggggctcccatagctcct
ttggaccttaactggctcttgagctggctatatcatcgtaaatacatgccttacttagcc
ctggcctctctgagcctggactcaagacaagaccactccctccatgatgctttccagagg
attgagttgtttatcaggaactctgttcgcctgaacccatgctggagggaaggaacctcc
ctgctccctgcccagattgtgatctaccttcagcaggccctgattatagctgagcaaggg
gaggacatgaagacacagagggacctgtgtcagggcttggccactgtctaccagcagtat
gatgctctagataaggctgtgcgctgtgctcaacaagctgtggagaccgggggccacatc
aatgaggaggagagctttgaggcctctgtgttgctcgggtggctgctggtgttgacaggc
caggctgagagggcccagaatgtcctacagccactgctcacatcactccagggcacagac
agtcccacgcagcgaggagtgatccacaacctcttggctttgtgtttgaggcggcagggt
cgaatcccagaggcaggctggcatctccactctgccctgctgatttccagggaaagtgga
aaccaaaggaaccaggcccttgcactggccaacctgggctgcctggctttggatgttggg
gcatctacggtggcagaacgcttcctggtcagatccctacgtctttttctggagctgtgg
gaaagccccacggacgaggagcacgttcagacctacctttggctggggcggagctacaaa
gacaggaggaagagtcaggacagcagggcgtgttatgaaatggggctgctaatcgcacta
catgccagaaacttacacagtcagatggtggtggccaaggtgctgagtcgactgtatgat
gacatgttactgtacggccagagcatcgtctactatgagcactgtgtgtcagtatccaga
gagctgaaggacaagagactggagggagagtatctggaaatcctcagcagcctctacctc
tcactcaacactgaaaaatcatctcggaaatctctggactacaccaagcagagcctgagg
atttctattgatttgggcaagagagaagaagagtcagagacgtggctgcaggtgggacgc
atctactacctcatccaagaggacgagctagctgacatgtacctgcaggcagcagtgaag
acagccctgaggatgaatgaccatcactttgccatgaacatctacgaggaggcaggagac
gtctactttaaaggccacaggaacaggatggcttcactgcctttctacagggatggcagt
ctgccatttgcacggagcatcagggacgtccactcagagttccgtttgttgagtaaactg
acagagctgttaatgacccagggagagcaggaggaggctctgcagtacgcaacactggct
gttcagatcaccggcaaaacaggtgtgcaagtgaatgagaggacagcctaccaccggctg
gctacagtctactacaacctgcagcagtatgagatggcagaaaactactacctcaagtcc
ctgtccctctgcccgcctgtcctgcaggaccccatggaggcccggtactacaccaaggtg
tactgcagactgggcaatctcactctacacaaactgaaggattcttttgatgcggtgggc
tacttccagttggctctggcagcggcgctggaggaccaaagtaaccccgaggctctgtac
gtggtgtacatgaagctggctgagatccacggcaaccacatgcccgatcctcaactgtgc
caagtttatagagacagagcccagagtctgaagagaattctggctggggaggaaggcgct
gctgttgtagaggaaaacatggcggatgcagacacagagctgggccaaaagaaggaagag
gactccggtgctgatatggaacgtacagaaagtttggttaagagaaacggtgttttcaca
tctacacctgaaaataaaaaacgtgacgacaactcatttccaagaacctcttttatcagt
gaagacaaagaggacagacatgcagacactgacactggagatactaatgggaaagatcac
agcaataatctcgatgcagatggcccttttgtggatgccttcgacacacaaaccattgcc
agtcagtcctacagtgacagtattcttactgagtcctttgatacagccaaggagcagatc
tcagactctagcagctccactgatactttacaaacttatcagaatcaaacagatgggaca
gactttgatactgaccacagcatgcccagtcaaatacacataagtgacatcacaagacac
agaggcagccacaacacagattctgatattcaggatgaacaaaacacccccactaaagga
actcacacagatccttttcaaaaggatgtcagtgatgaggacaatcagtctgatattaac
cgagactgttag
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