Epinephelus lanceolatus (giant grouper): 117261210
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Entry
117261210 CDS
T07331
Name
(RefSeq) integrin alpha-6-like isoform X1
KO
K06485
integrin alpha 6
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04382
Cornified envelope formation
ely04510
Focal adhesion
ely04512
ECM-receptor interaction
ely04514
Cell adhesion molecule (CAM) interaction
ely04518
Integrin signaling
ely04810
Regulation of actin cytoskeleton
ely04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117261210
04514 Cell adhesion molecule (CAM) interaction
117261210
04518 Integrin signaling
117261210
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117261210
09142 Cell motility
04820 Cytoskeleton in muscle cells
117261210
04810 Regulation of actin cytoskeleton
117261210
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117261210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117261210
04515 Cell adhesion molecules [BR:
ely04515
]
117261210
04090 CD molecules [BR:
ely04090
]
117261210
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117261210
Exosomal proteins of breast milk
117261210
Cell adhesion molecules [BR:
ely04515
]
Integrins
Integrin alpha subunits
117261210
CD molecules [BR:
ely04090
]
Proteins
117261210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FxsA
Motif
Other DBs
NCBI-GeneID:
117261210
NCBI-ProteinID:
XP_033489421
LinkDB
All DBs
Position
10:complement(35911705..35933492)
Genome browser
AA seq
1059 aa
AA seq
DB search
MAKHWHMVYLLCFWCLLTFDVTAFNLDTQNVMQRNGDPGSLFGFSVAFHQQLNPAKKNLL
LVGAPRAKHQNQVNVTGVVYQCDLTTTSDRCQPIEFDDDAFLDSKGINNQWMGVRVTSQG
PGRNVMTCAHRYQQWSPSPSLYVPRLVTGQCYLLGEDLQVGKVERTWRRVVCGLKHLTKR
QMDHAWFAYCQQGHGASFAKDNTSLLFGAPGAYLWKGIVRMEVVDNLDIFSPDPRETGDY
DQFDPNLIPLQRDSYLGFSIDSGMALIGQGELTIVSGAPRGGYSGQVAFLKADPVLKTSL
AVKLVLSGQGLASSFGYDVAVVDLNGDGWEDLAVGAPQFFVKDGLVGGAVYIYINDKGKN
WEKIVPTQLLGHKDSMFGLAVASIGDINQDGFGDIAVGAPYDGSGRVYLYYGTSDGIHQK
PVQVLSPGSKEATLFGYSLSGNLDVDNNQYPDLAVGSLSDSVFVYRARPVVTVSTYLTVT
PNQIDITKEQCDERTCYFTARACFTYTAHPASLNPKLTLSYTFEADAEKRKMRLPPRMDF
LVSFPRKLELPGQKREVCTDIRIRLLRDIKDRLHSIPVSVTVSLLSSSQTTRTSADLPNV
TPVFNLFQPKSTVSEIILINKGCGRDNICQSNLELQYKFCSRKKQDNHDVFKPLASEDGV
AVITPSEDDIALEITVTNRNGDDAHQSHSVISLPDALPYASIVYSTASETQVSCAANEKG
TLIDCELGNPLKRDAEVTFYVLLATSRITLSTKDVNVTMQLTTTSVQTIQPVEALAKVVF
ELELRVYGLARPSQVSLGETLKGESGMNSVDEIGTLVQFEFRITNLGRSLKSFANASLNI
HWPKENSVGKWVLYLTQINSKGVQSVPCSPVDEVNPLKHVKGWHDPSRKRREAEAEVEAL
STDGFPFLPKRRKYKTLTCSDGLKCVEIRCPLLGLDSSAVMVLHSRLWNATFTEDYSSLN
YLDIVVDATLTLTNSPENIGLQPENPGTKVKVTVFLERKVKYFTKVAWWIIFLTVIALLL
LLAILGFLLRKRGCINCLAQNKKLPHDGHPDTETAPLKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcattggcacatggtgtatctgttgtgtttctggtgcctcctgacttttgat
gttacagctttcaatctggacacgcagaatgtgatgcagagaaatggagatccaggaagc
ctgtttggattttctgttgctttccaccagcagctgaatcctgccaaaaagaacctattg
ctggttggagctccgcgagcaaaacaccagaaccaagtgaatgtaactggtgttgtttac
cagtgtgatctcactacaacgtctgatcgctgccagcccattgagtttgatgatgacgcg
tttctggatagtaaaggcataaacaaccagtggatgggagttagagtgacgagccaaggt
cctggaagaaatgtcatgacttgtgctcatcgataccagcaatggagcccaagtccgagc
ctttatgtccctcgtttggtgacgggtcagtgttacctcttaggggaagacctgcaggtc
gggaaggtagagaggacgtggaggagggtagtttgtggccttaagcacctgaccaaacgt
caaatggaccacgcatggtttgcatactgccaacagggtcatggggcatcttttgcaaag
gacaacacatctctgttatttggagcaccgggagcgtacctgtggaaaggaatcgtacga
atggaagtcgtggacaacctggacatcttcagtccggatcctcgtgagactggggattat
gaccaatttgacccaaacctcattcccctacagagagacagctacctgggattctccatt
gactctggtatggccctcatcggacagggtgagttgaccatcgtctcaggagcacccaga
ggaggttacagtggccaggtggcatttcttaaggccgaccccgtgttgaagacaagtttg
gctgtgaagttggtcctctctggtcagggcctggcctcctcctttggttatgatgtggca
gtggtggatctcaatggtgatgggtgggaggacctcgctgtaggagcaccacagttcttt
gttaaagatggattggttggaggagctgtctacatctatatcaacgacaaaggaaaaaac
tgggagaagattgttccaactcaacttcttggacataaagactcaatgttcggccttgca
gtggcaagcataggagacatcaatcaagatggttttggagatattgctgtgggggcacca
tatgatggctctggtcgagtttacctttactacggcacatcagatggaatccaccaaaag
ccagtgcaggtactctcaccagggtccaaagaggctactctgtttggatattctctgtct
ggaaacttggacgtggataacaatcagtatcctgatctggctgtgggatctctgtctgat
tctgtctttgtctacagagcgaggccagtggtcactgtcagcacctatctgacggtaaca
ccaaatcaaatagacatcacaaaggaacaatgtgatgaacgcacatgttattttacagct
cgggcatgttttacctacacggcacacccagcatcgctcaaccccaaactgaccctcagc
tatacttttgaggccgatgccgaaaagagaaagatgagacttcctcccagaatggacttt
ctggtttcttttccaagaaaattggagctgcctggacagaagagagaagtgtgtactgac
atccgaatccgacttctgcgtgatattaaggacaggctgcacagtatccccgtctccgtc
actgtgtctcttttgagctccagtcagacaaccaggacgagtgcagatcttcccaacgtt
actcctgtcttcaacctcttccagccaaagagcacagtctcagagattatattaataaac
aaaggctgcggcagggacaacatttgccaaagtaacctcgagctacagtacaaattctgc
tccagaaaaaaacaagacaatcatgatgttttcaaaccactggccagcgaggatggtgtt
gcagtcatcactccgtctgaagatgatatagctttggagatcactgtgactaacagaaac
ggggatgacgcacaccagagtcactcggtcatcagcctccccgatgctcttccttacgcc
tccattgtctacagcacagcatcagaaacacaagtgagttgtgcggccaatgaaaaagga
acactaatagactgtgaactgggaaatccactcaagagagatgctgaggttactttttat
gtcctactcgcaacatctaggatcacactgagcacaaaagacgtcaacgtcacaatgcaa
cttacaacgacgagtgtgcagacgatacagccagtggaggcgttggcaaaagtggttttt
gagctggagctgcgagtatatggactagccaggccttctcaagtgtcactgggtgaaacc
ttgaagggtgagagcggcatgaattcagtggatgaaataggaactctggttcaatttgaa
tttaggataacaaatttgggcagatcacttaaatcttttgccaatgcgtcactgaacatc
cactggccgaaggagaactctgtaggaaaatgggttctgtacttgactcagatcaacagt
aaaggtgtacagtcggtcccctgctcacctgtggacgaagtcaatccactgaaacatgta
aagggttggcatgacccctcaaggaaaagacgtgaagctgaagctgaagttgaagctctc
tcaactgacggattcccatttcttccaaaaagaagaaaatacaaaaccttgacctgctct
gatggactgaagtgtgtggagatacgctgccctctgctggggttggacagctctgcagtg
atggttctgcactcacgcctgtggaacgccacttttacagaggattatagctctttgaac
tacctggacattgttgtggatgctactctcactttaacaaactctccagagaatattgga
cttcaaccagagaatcctgggacaaaggtaaaggtgacagtgttcctcgagagaaaggtc
aaatatttcactaaagttgcctggtggataatcttcctgacggtcatcgcgttgctcctg
ttgttggcaattcttggcttcttgttgcggaagcgtggatgcattaactgcctcgctcag
aacaagaaactcccacatgatggacatccagacacagagaccgctccccttaagggctga
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integrated database retrieval system