Epinephelus lanceolatus (giant grouper): 117261245
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Entry
117261245 CDS
T07331
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03020
RNA polymerase
ely03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117261245 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
117261245 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117261245 (polr2b)
03400 DNA repair and recombination proteins [BR:
ely03400
]
117261245 (polr2b)
Enzymes [BR:
ely01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117261245 (polr2b)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117261245 (polr2b)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117261245 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
117261245
NCBI-ProteinID:
XP_033489471
LinkDB
All DBs
Position
10:45485244..45498018
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKKLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatcaggacgaagataaccagtatgacgaggacgatgatgaaatcactccagat
ttgtggcaggaagcatgctggatcgtcatcagctcttattttgacgagaagggtctggtg
cggcagcagctggattcatttgatgagttcatccagatgtcggttcagaggattgtggag
gacgctccgcccatcgacctgcaggctgaagcccagcacacctcaggagaggtggaggag
ccgcctcgttacctgctgaagttcgaacagatctacctgtccaagcccacccactgggag
agagacggagcgccatctcccatgatgcccaacgaagctcgactgcggaacctcacgtac
tcggcccctctgtacgttgacatcacaaagaccatcataaaggagggcgaggaccagctg
cagactcagcaccagaagaccttcattggtaaaattcccatcatgcttcgctccacctac
tgtctgctgagcggcctgacagacagagacttgtgtgagctcaacgagtgtccgctcgac
cccggaggttatttcatcatcaacggctccgagaaggtgctgatcgctcaggaaaagatg
gccaccaacacagtgtatgtgtttgccaagaaggactcaaagtacgcctacactggtgag
tgtcggtcctgtttggagaactcgtcccgtcccaccagcaccatctgggtcagcatgatg
gccagaggaggacagggtgtgaagaagagcgccattggtcagaggattgtgtccacgctg
ccgtacatcagacaggaagttcctatcatcatcgtgttccgagcgctgggcttcgtgtca
gacagagacatcctggaacacatcatctacgacttcgacgacccagagatgatggagatg
gtgaagccgtctctggacgaagcgtttgtgatccaggagcagaacgtggcattgaacttt
atcggctccagaggtgcgaaacctggagtgacgaaggaacggagaattaaatacgcaaaa
gaagttctgcagaaagagatgctgccgcacgtcggagtcagcgacttctgtgagaccaag
aaagcttacttcctagggtacatggtccacaggttgctgctggctgctctcggcagacgt
gagctagacgacagagatcactacggcaacaagagactggacctggcagggcctctgttg
gctttcctgttcagaggcatgtttaagaaactgctgaaggaaatcaggatttacgctcag
aagtttatcgacagaggaaaagacttcaatctggagctcgccattaaaactcgaatcatc
tcagacggcctcaagtactcgctggccactggaaactggggcgatgtgaagaaggctcac
caggcccgagctggagtgtcacaggtgttgaaccgtctgacatttgcatccactctgtcc
catcttcgacgagtcaactctccaatcggcagagatggcaaactggcaaaaccccgacag
ctgcacaacacactgtgggggatggtgtgtccggctgagacgccagagggtcacgctgtg
ggtctggtgaagaacttggccctcatggcctacatctctgtgggctctcagccgtctccc
atcctggagtttttggaggagtggagtatggagaacctggaggagatctcgcctgccgcc
atagcagatgccactaagatctttgtcaatggctgctgggttggaatccacaaagatcct
gaacagctgatgaacacactgaggaaactccgcagacagatggacatcatcgtgtctgag
gtgtcaatgatcagagacatcagagaacgtgagatcagaatctacacagacgctggacga
atctgccgaccgctgttgatcgtcgagaaacagaagctgctgctgaagaggcgacacatc
gaccagctgaaggaaagagagtacaacaactacagctggcaggacttggtggcgagcggc
gtggtggaatacatcgacacgctggaggaagagacggtgatgcttgccatgacccctgat
gacctccaggagaagggtgtggcttactgctccacctacacacactgtgagatccacccg
tccatgatcctcggagtctgtgcttccatcatccccttccccgatcacaaccagtctccc
aggaacacgtatcagtctgctatgggtaaacaggccatgggtgtctatatcaccaacttc
catgtacgaatggacacgctggcccacgtcttgtactatcctcagaaaccgctggtcacc
actcgatccatggagtacctgcgcttcagagagctgcctgcaggaatcaactccatcgtg
gcgattgcctcgtacactggatacaaccaggaggactctgtaatcatgaacaggtcggct
gtggaccgaggcttcttcaggtctgtgttctatcgatcctacaaagagcaggaatctaag
aaaggttttgatcaagaggagatcttcgagaagccgacacgtgaaacctgtcagggtatg
agacacgccatctacgacaagctggatgatgatgggctcatcgcacccggtgttcgtgtc
tccggtgaggacgtgatcatcggaaagactgtaacgctgccagaaaatgatgacgagctg
gacagcaccaaccgacgctacacaaagagagactgcagcaccttccttagaaccagtgag
actggcattgtggaccaggtgatggtaactctgaaccaggagggctacaagttctgcaag
atcagggttcgctcggtccggattcctcagatcggagacaagttcgccagccgacacgga
cagaaaggaacctgtggaatccagtacagacaggaggacatgccgttcacctgcgaagga
atcacacctgacatcatcattaacccgcacgccatcccgtccagaatgacagtcggccat
cttatcgagtgtctgcagggcaaggtctctgcaaacaaaggtgagatcggtgacgccacg
ccatttaacgacgccgtcaacgtgcagaaagtgtcaaacctgctgtctgaatatggatac
cacctgagaggaaatgaggttctgtataacgggttcacggggaggaagctgacatcacaa
atcttcatcggcccgacttattatcagcgtctgaagcatatggtggatgacaagatccac
tcgagggcccggggccccgtccagatcctcaacaggcagccaatggaaggtcgatcacgt
gatggcggcctgcgtttcggagagatggagcgtgactgtcagatcgctcacggagcggct
cagttcctcagagaacgtctgttcgaggcatctgatccgtatcaagttcacgtgtgcaac
ctctgtggactgatggccattgccaacacacggacgcacacgtatgagtgtcgaggctgc
cgcaacaagacacagatctctctggtccggatgccgtacgcctgtaagcttctcttccag
gagttgatgtcgatgagtattgctcctcgtatgatgacatcatag
DBGET
integrated database retrieval system
