Epinephelus lanceolatus (giant grouper): 117261306
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Entry
117261306 CDS
T07331
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117261306 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Protocadherins
117261306 (si:ch73-233f7.1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
117261306
NCBI-ProteinID:
XP_033489564
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Position
10:27115521..27123289
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AA seq
1008 aa
AA seq
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MDHRLSRGSWVPVTGLVVCLLLCACVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVA
KLSARRFRIVSGAKRQYLEVNLENGILFVNEKIDREELCERSPSCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWSEFNLDITESAAPGSCFPLESAQDQDVGTNSLRSYQLSANEH
FVLNIQTRNDGSKFAELVLDTPLDREQQKKHEMVLTAFDGGSPERSGTALITITVLDAND
NVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFSVDP
YTGEIRVKGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVTSEFLDREA
VSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFSQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQILVQA
QDAGFPPLASNITVNVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGYLVTKITALD
ADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRLVEKDATRQRLVILVKDNGQPPLS
ATVSIVLTVVDSVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISLIFLVAIIVLAAVKC
YKDRETISGYNLPPFACCCCGGFQPDPPPEVFKKSNLNLQISSAAKVPTNCMEVNGNSSL
SQSYCYKVCLTPESAKSDFMFLKPCSPGSTPRNNEAKSAENSWNAQSRSASVNNGATTPN
ELKQPNTDWTLTKNQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMAPGQYWTWGTHMR
GMKDYKMSPSTSGVPSRPWTPRCTPPPQQQQPSIPPHPHPHPHPHPPPDYHHNVYIPGTP
SGFCTLRPAAQRSELDVHNSFSTFGKKRRLQMSPQGEAAIINNDLYND
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggatcacagactctctagaggcagttgggtaccagtgactgggctggttgtatgcctg
cttctgtgtgcgtgtgtagtggacctggttcttgcgcaaattcggtactccattcccgaa
gagctggagcatggagcttttgtgggcaacatcgccgaagatctgggcttggatgttgcc
aagctgtcagcgcgccggtttcgtatagtctccggcgcaaagaggcagtatttagaagtg
aacttggagaatggcatcctctttgttaacgaaaagatagacagagaggagctgtgtgaa
cgaagcccgagctgttttttacacttacaagtggtcattgaaaacccactagaactgtac
agagtggaagtggagattttagatgtgaatgacaactcccccagtttcccatggagcgag
tttaatcttgacatcactgagtcggctgcgcccggctcctgtttcccgttagagagcgca
caggaccaggacgtgggcaccaactctctgcgctcctaccagctaagcgcaaacgagcac
tttgtactgaacatccagacgcgcaatgatggaagcaagtttgcggagctcgtgctggac
accccactggaccgggaacagcagaaaaagcacgaaatggttctgactgcctttgacggg
gggtcaccggaacgctctgggacagcactgataactatcacagtgttagacgccaacgat
aacgtgcccgtgtttgaccgctcagtttaccgggcgagcctggtggagaacgcaccgagg
gggacgctggtgctgaagctgaacgccacagacctggatgagggctcgaatggggaggtg
acctacgcgtttagcgggcacgcacccctcaaggtgcgcgaactgttcagcgtggacccg
tacacgggcgaaatccgagtgaagggcattgtggactatgagaaagccagtgtgtatgag
ctgtatgtgcaggcaaaagacaggggaccctcggctgtggctgtgcacagtaaagtgctg
gtagacatcctggatgtgaatgacaacgcgcccgaagtcattctcacatcagtgtccact
cctgtccaagaagacgcgccaccgggcacggtgatagctgttatcagcgtaatggaccgg
gactcgggagagaacggaaacgttgattgccaaattccgagcaacgtcccttttcagctc
cattcatcatttaaaaactattatactctggtgacgagcgagtttctggacagagaagcg
gtgtccgagtacaacatcaccctcacagcccgagacttgggctctccttcgctctccacc
aggaaaaccatcctcgttcaagtgtctgacattaatgacaaccccccgcggttctctcaa
ccttcatacacagtttatgtgaccgagaataatgccccgggcgcttccatttgctctgta
actgcattcgaccccgattcaaaccagaacgcctatctgtcttattctattctcgagggt
cagattcagggcatgcccgtgtccacttatgtctcaatcaactctgacaacggcaatatc
tacgcactgcgctcttttgattatgagcaacttagaaactttcagattctggtacaggcg
caggacgcaggtttcccccctctcgccagtaatatcacagttaatgtctttgtcttggac
cagaacgacaatgcacctgttattgtatccccgctgcccaaaaacggcaccgtggccaca
gaggtggttccgcggtcagtagacgctgggtatctggttacaaaaataacagcgctagac
gcggacgcagggcaaaactcccgcctgtcctatcaggtgttgcaggctacagacccgggg
ctgttcagcgtggctctgtacacgggcgaaatcaggactattcgccggctagtggaaaaa
gacgcaacaaggcaaagactggtaatattagtcaaggacaacgggcagccgccgctctcc
gccacagtctctattgtcctcacagtggtagacagcgtgcccgagtcgctgtcagatttc
ggagacctcacactcagcccacagcccccctcaaacctcgctctctacttgatcgtgtca
ctgagcacaatatctttaatattcctcgtggctattattgtgctggctgcggtcaagtgc
tacaaagacagggagacaatcagcgggtacaacctccccccgttcgcctgctgctgttgc
ggggggtttcagcccgatccgcctccggaggtgttcaaaaaatccaacctcaacctgcag
atttcatccgcggccaaagtacccacgaactgcatggaggtgaatggaaacagcagtctc
tctcagtcatattgttataaagtctgtctgactcccgaatcagccaaaagtgactttatg
tttctgaagccgtgcagccccggcagcactcccaggaacaacgaggcgaagagcgcggaa
aactcgtggaacgcgcagagccggagcgcatctgtgaacaacggagcaactactcccaac
gagctgaagcagccaaacacagactggactctcacaaagaatcagaactcctccattaaa
agttataactctatcaacatggatggcaccctcatgcgcaaggctatgcatgcagatcca
gaaaactacgtcacatccatggcgcctggacagtactggacgtggggaactcacatgaga
gggatgaaagactataagatgtctccttccaccagtggggtcccctctcgcccctggact
cctcggtgcacacctcctccccaacaacagcagccatccattccaccccaccctcaccca
cacccacacccacacccgccccctgactaccaccacaatgtctacatccctgggacacca
tcaggcttttgcaccttgaggcccgcggcacagcgaagtgagctggatgtccataattct
ttctccacctttggaaagaagcgacgccttcagatgtccccccaaggggaggctgcgatt
ataaataatgacctgtacaatgattga
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