Epinephelus lanceolatus (giant grouper): 117261467
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Entry
117261467 CDS
T07331
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04140
Autophagy - animal
ely04148
Efferocytosis
ely05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117261467 (vps11)
04148 Efferocytosis
117261467 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117261467 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117261467 (vps11)
Membrane trafficking [BR:
ely04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117261467 (vps11)
Hops complex
117261467 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-RING_5
TPR_GEMI5
Beta-prop_EML_2
zf-ANAPC11
zf-RING-like
TSGP1
ToxA_N
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
117261467
NCBI-ProteinID:
XP_033489767
LinkDB
All DBs
Position
2:38744650..38759088
Genome browser
AA seq
926 aa
AA seq
DB search
MAAFLQWRKFVFFDKDTVKDPVDNGKNFAVPSGISACDSGRGHVVLGDMDGKIWLMTRSL
QLTSFQAYKLRVTHLYQLKQHSILVSVGQDEHGINPLVKVWNLDKRDSGNPLCTRIFPAI
PGNKPTEVSCLGVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTSPVTGLAFR
QVAKVTHLFVATLEKVHCYTLSIKEYPKVELDTHGCALRCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLAHWHRGYLFLLVRDAKSPNKTEFGSRESSPSDKQLLTIYD
LDNKFIAYSASFDDVIDVVAEWGSFYILTRDGNMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSEGEVHFDVEIAIKVLRQA
GYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESNMKRYGKTLMHHV
PEGTTLLLKGLCTNYQPSGDTAEKESLDRGRANKANSEEFIPIFANNPRELKAFLEHMIE
VEPRSPQGVYDTLLELRLQDWAHEQDPARKKVLQEEAVSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
AYISEVLQHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDECKIRL
YREETAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
PPGSKTVGSLEVNLQRDLLIHTKRNC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggaggaaatttgtcttctttgataaagacacggtgaaggat
cctgtggataatgggaaaaactttgctgtcccaagcggaatatcagcttgtgactccggc
cggggtcatgttgttctgggagatatggatggcaagatctggcttatgacacgctccctg
cagctgacgtcttttcaggcctacaagttgcgggtaactcatctctaccagctgaagcag
cacagcattcttgtgtcagtggggcaggatgaacatggaataaaccctctagtcaaggtg
tggaaccttgacaagagggacagtggaaatcctctgtgcactaggattttccccgcaatt
cctggcaacaaaccgactgaagtgtcttgtctcggtgtacatgaaaacctcaacttcatg
gctattggtttcacagatggcagtgtggttttgaccaaaggtgacatcaccagagatcgt
cacagtaaaactctgactctgcatgagggaaccagcccagtcacaggccttgctttccgc
caagtggcaaaggtcacacatttgtttgttgccactctggagaaagtccattgctacacc
ctgtccatcaaggagtatcctaaagtagagctggatacacatggctgtgcgttgcgctgc
tcctccctggcagatccctcccaggactcccagttcattgtggctggtgatgaatgcgtg
tacctgtaccagcctgatgaacgagggccctgctttgcctttgatggacacaagctgttg
gcccactggcaccgtggatatctgtttttactcgtcagagacgcaaagtctcccaacaag
acagagtttggcagcagggagagctctccatcagacaaacagcttctgaccatctatgac
ctggacaacaagttcatcgcctacagtgcctcgtttgatgatgtcatcgatgtggtggca
gagtggggctctttctatatcctgaccagagatggaaacatgtttgttctgcaggagaaa
gacacgcagaccaaactggagatgctgtttaagaagaacctgtttgtgatggccataaac
ctggctaagagccagcacctggacagtgacggactgtcggagatcttcagacagtacggt
gatcacctttatctcaagggagaccatgacggtgccatccagcagtacattcgcaccatt
gggaaactggagccatcgtatgtcatcaggaaattcttggatgcacagaggatccataac
ctgaccgcatatctgcaagccctgcacaggcagtcactagccaatgcagaccacaccact
ctgctactgaactgttacactaagctgaaggacagctccaagctggaagagttcattaag
agcagtgaaggtgaggtccactttgatgttgagatcgccatcaaggttcttcggcaggcc
ggctaccacagccatgctgttttcttagctgagaaacacatgcaccatgaatggtacttg
aagatccagctggaagacctcaagaactatcaggaagggctgcgttacatcggtcgtctg
ccttttgaacaagcagagagcaacatgaagcgctatggcaaaacactgatgcaccatgtt
cctgaaggcaccacgctgctcctgaagggtttatgcaccaactaccaacccagtggagac
actgctgaaaaagagagcctggataggggtcgggccaacaaggccaactccgaagaattc
atcccaatttttgccaacaaccctcgtgagctgaaagccttcctggagcacatgatcgag
gtggagccccgttctccccagggtgtgtatgacacactgctggagctccggctacaagac
tgggcacacgaacaagaccctgcgagaaaaaaggtcctgcaggaggaagctgtgtcactg
ttgaggagcgataacactgtgtttgataaggccttggttctctgccagatgcacaacttc
aaagaaggcgtcctctacctttatgagaagggcaaactgtaccagcagattatgcactac
cacatgcagaacgaagagtatgggaaagtggtggaggcctgcaagcgctatggggaccag
gagggttgcctttgggagcaggcgttgggatactttgccagaaaggaagaggactgcaag
gcctacatcagtgaggtcctccaacacattgaccaaaacaacctgatgcctccattactt
gtggtgcaaaccctggcacacaactcgacggccactctctctgtcatcaaggactacctc
atcaacaagctgcagagggagagccagcagatagaagacgatgaatgcaaaatccgcctg
tatcgtgaagaaacggctcacctccgctccgagatccaggaactcaaaacgagtgctaag
atattccagaagaccaagtgtaacatgtgcaacagccccctggagctgccatcggttcat
ttcctgtgcagccactccttccaccaacactgcttcgaaagctatgctgagagcgaggct
gagtgtccaacttgcactcctgagaaccgcaaagtcatggacatgctgcgtgctcaggac
cagaaacgcgacctgcatgatcacttcaacagacagttacgcagctcaaatgatgggttc
tctgtcgtggctgactattttggtcgaggagtgtttaacaaactgactctggtcactgac
ccaccgggcagcaaaactgttgggagtctggaagtcaacctgcagagagaccttctcatt
cacaccaagagaaactgctaa
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