Epinephelus lanceolatus (giant grouper): 117261686
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Entry
117261686 CDS
T07331
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117261686 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ely04812
]
117261686 (lsp1a)
Cytoskeleton proteins [BR:
ely04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117261686 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
117261686
NCBI-ProteinID:
XP_033489993
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All DBs
Position
11:44713353..44793324
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AA seq
573 aa
AA seq
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MSNALLRRNSSKQGLQNLMRLTAQRSMEDAEEVERERRRRAREASRWNNEGSLAGESSQE
NETTAQESMYDGELKPHSSPSLEEDEGFSDWTQRRERRRQQRLQELSQAGEEDEEEEEHM
INKAVPVKTVQASVTSSSRLQRQEQAEEEEEEDRARVEMKRRKEREEEAIRAERVRREKE
REEEEEEKRKREEVMTRRREIQRLNPEVEKRKEVKISYTSKVVLHQEPKHSNTNGDATKE
EVTSYKNNKTKHSTSRGVEPEEAEAILETEQRLEKIRQSLQQKECQELEQLRHRQVEAEQ
ELEELKRRREERRRVRVEEERRREEEEQQRLAKEEEERRQMKEDIERRRMEAAERMKILS
VSSSDGDETFSPFSPKTSTHKITERTESLNRSLKKSNSFKKTQPLVLLAKIDDKLEQYAH
AVENSQETRAVKASPPDLHSSPEVVISKKNLFEAGEVWSQSPTKGATCKDTEGLKVGVAN
RITQWVKGPSDSSRQPLSKPADVRPGDVMQKKNMWEIIGDSTERPRQRPKGSAAGKKYKF
VVTGHGKYEKIPVDDENGGEFTNGESDLYHDNY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgctctgctgaggagaaactccagcaaacagggtttacaaaacctgatgagg
ctgacggctcagaggagcatggaggacgctgaggaggtggagagggagcgccgtcgtcga
gccagggaggcctcacgctggaacaacgaaggctcgctggccggagagtcttcacaggag
aatgagacgacggcacaggagagcatgtacgacggtgaactgaagccacacagctctccg
tctctggaggaggacgaaggcttcagtgactggactcagcgcagagagagacggaggcag
cagcgcctgcaggagctcagccaggcaggcgaggaagacgaggaagaagaggagcacatg
ataaacaaagctgtacccgtaaagaccgtccaggcttcggtcacgtcctccagccgactc
cagagacaggagcaggcagaggaagaggaagaagaggacagggccagggtggagatgaag
aggaggaaggagcgtgaggaggaggccatccgggctgagagagtgaggagagagaaggag
agggaggaggaggaggaggagaagaggaagagagaggaggtgatgaccaggaggagggag
atccaaaggctgaatccagaggtggagaaaagaaaagaagtcaaaatctcctacacatcg
aaggtggttctccaccaggagccaaaacacagcaacaccaacggagatgcaaccaaagag
gaagtgacatcatacaagaacaacaagacaaaacactccaccagcagaggagtggagcca
gaggaggcggaggccatcctggagacggagcagcgcttggagaagatccggcagagcctc
cagcagaaggagtgccaggagctggagcagctgagacacaggcaggtggaggccgagcag
gagctggaggagctgaagaggaggagggaggagaggcgtcgagtgcgggtggaggaggag
cgtcggagggaggaggaggagcagcagcggctggccaaagaggaggaggagaggaggcag
atgaaggaggacatcgagaggaggaggatggaggcggccgagaggatgaagatcctgagt
gtgtccagctcggacggagacgagacgttcagtcccttcagccccaaaacttctacacac
aagatcacagagagaactgagtcgctgaaccgctcactgaagaaaagtaacagcttcaag
aagacgcagcctctcgtcctgctggccaagatcgatgacaagctggagcagtacgcccac
gctgtggagaactcccaggagacccgggcagtgaaggcatcaccacccgacctgcacagc
tcacctgaggtcgtcatctccaagaaaaacctgtttgaggccggagaagtttggagtcag
agtcccactaaaggagccacctgcaaggacactgaggggctgaaggtgggcgtggccaac
aggatcactcagtgggtgaagggtccgtctgacagcagcagacagccgctcagcaaacca
gcagacgtgagacctggagatgtgatgcagaaaaagaacatgtgggagattattggagac
tcgacagagagacccaggcagagacccaagggctcagcagctggtaaaaagtacaaattt
gtggtcactggtcacggcaaatatgagaagatccccgtggatgatgagaacggaggagag
ttcactaacggagagtccgatttatatcatgataattactga
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