Epinephelus lanceolatus (giant grouper): 117261775
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Entry
117261775 CDS
T07331
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117261775 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117261775 (myo5c)
04131 Membrane trafficking [BR:
ely04131
]
117261775 (myo5c)
03029 Mitochondrial biogenesis [BR:
ely03029
]
117261775 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ely04812
]
117261775 (myo5c)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117261775 (myo5c)
mRNA cycle factors
P-body specific factors
117261775 (myo5c)
Membrane trafficking [BR:
ely04131
]
Others
Actin-binding proteins
Myosins
117261775 (myo5c)
Mitochondrial biogenesis [BR:
ely03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117261775 (myo5c)
Cytoskeleton proteins [BR:
ely04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117261775 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
AvrPto
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117261775
NCBI-ProteinID:
XP_033490157
LinkDB
All DBs
Position
11:complement(26993647..27011069)
Genome browser
AA seq
1743 aa
AA seq
DB search
MALLELYTEYNRVWIPDAEHVWKSAEIIRDFNIGDNVLELLLEDGTEHYYPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKELHVYG
DAVIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPVTEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVIFQADDERNYHIFYQMCSCADLPEFKNLRLLGADKFQYTCMGGEITIEGVD
DKKDMEETRRTFSLLGLNEDFQFNVFKVLAAILHLGNVKIKDSGDGKSSVPPSDPHLAVF
CELLDVSTEQLVRWLCHRRIVLVTETVVKPVPKERAVNARDALAKQIYAHLFDCIITRIN
TALKVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCKGFLEKNRDTLYEELVDIMRASKFPFLANFFREEEQSTVS
SKGVKVRPARPGVKPANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEADVRDKKQTCKKV
LQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGASVTIQKHFRGWSQRRKYLRMR
QAAIILQQYIRGKKTIRKTVTAATLKQGWASVVIQRYWRGYRMRQIFQVVRLASITIQAF
TRGWMARKRYKKMMEEQKALILQKYARAWLARRRFQTMRRLVLNVQLSYRVQTLKKKIEE
QNKENRGLMERLTSLANSHAQTVDRLQVLEVQLEKSTNQKASLEAREKKVKEDASVTTAQ
LKKEIDALNLEKQNLEKKFEASTKEAQESFDEIKRGLQEEKEYEARLRKIAENNTEIQRH
DHEREVEALKEEIKRLKEERVGLQRKIEEADRANSDLQEQNIQLTKHIKVIPELRRDLNN
LQNQRNNMDRRMKQQSEQARAKMNDITRQLLGGVVEQEVLLGLTPDDSEKIYEVEDLLTA
FDGLQKATRILESHQREQKESYETQVEGLKLKVDHLQNENSKLQNLFQEKSNVNKSIRQE
VSRLSSENSVIPELKLQASELQRQKQELEVRIEEQSRELAEKTEEITNTLQRKIKEESSQ
RRHFEEKAEELEELKRELHGKVEELEEENDHLKRQLLMEMEAKSKLRQETSQLTAENMDF
EEQLDQKDRLIRKLQNQIKSLETSQKAVKQTSAPAIPKDYLGMLEYKREDESRLIQNIIL
ELKPKGVVVSMMPGLPANILFMCIRHADYLNDEVKLKSLMTAIINGVKKVIMSYHKDFEL
LSFWLSNTYQLLNCLKQYSGEEEFMKQNTPRQKKNCLKNFDLSEHRQILSDMAIQIYHQF
ISVMEKSLAPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSETHTISSIIQQLSVFH
STMSQHGMEQGLIKQAVKQMFFLIGATALNNIMLRKDMCSCRKGMQIRCNISYLEEWLKE
KQMQSSNAMDTLRPLSQAAWLLQVNKSTDDDANEITEKCTELNPVQIVKILNSYTPIDDF
EKRVSSSFVRKVQSLLHDRDGSTQLMLDSDYRFQVTFPFCPSSQALELLQVPSSLHLGFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggagctgtacaccgagtacaacagagtgtggataccagatgcagaacat
gtgtggaaatcagccgagattatcagagactttaatattggggataatgtccttgaactg
cttcttgaagatggcactgagcactactaccctgttgacccatcaaagccacagctccct
ccactccgcaaccctgacatcttggtgggggagaatgacctcactgccctcagctacctg
catgaacctgcagtcctgcataatcttaaagttagatttgtggagtccagaatcatctac
acctactgtggtattatactagtggctgtaaatccatacaaagagcttcatgtctatgga
gatgcagtcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccacaagaaccagtctatcatt
gtcagtggtgaatctggagccggtaaaactgtgtctgctcgatacgccatgagatacttt
gctgttgtgagcaagtctggaagtaagactcgtgttgaagacaaagtcttggcttcaaat
cccgtaacagaggcaattggaaatgcaaagaccaccaggaacgacaacagcagccgtttt
gggaaatacacagagatcagctttgacaggaggtaccggatcatcggagcgaacatgaga
acatatctcctagagaaatccagagtcatttttcaggcagacgacgagcgaaactatcac
atattctaccagatgtgttcctgtgctgacctgccagagttcaagaatctgagactgttg
ggtgcagataagttccagtacacctgcatgggcggtgagatcacaattgaaggtgtagat
gacaagaaagacatggaggagactcgacgcaccttctcactgctggggctgaacgaggac
tttcagttcaatgtgttcaaagttctggcggccattctgcatttgggaaatgtgaaaatc
aaagactctggagatggcaaatcatcagtccctcccagtgatccacacctggcagtcttt
tgcgagctgctggatgtgagcacagagcagttggtgcgctggctgtgccatcggaggatc
gttctggtgactgagacggtggtgaagccggtgcccaaagagcgggcagtaaatgccaga
gatgccctagccaagcagatctacgcccatctgttcgactgcattattaccaggataaac
acagcattgaaggttccaggaaagcaacatgctttcattggtgttctggatatttatggc
tttgaaacatttgacatcaacagctttgaacagttttgtatcaactacgcaaatgagaag
cttcaacagcagtttaacttgcatgtgttcaagctggagcaagaggaatacatgaaagag
gacatcccatggacgctgatagatttctatgacaaccagccggtcattgacctgattgag
gcaaagatggggatcctggacctgcttgatgaagaatgtttgtttcctcagggcactgac
caaagctggctgcaaaagctgttcaactacctcgatgccaatcctctgtttgagaagccc
aggttatcaaatgaggcatttgtgattcaacactttgcagacaaggtggaatatcaatgc
aaaggttttcttgaaaagaacagagacactctctatgaagagctggttgatatcatgaga
gccagtaagtttccctttctggccaactttttccgagaggaggagcaaagcactgtgagc
agtaaaggtgtcaaagtgaggccggccaggcccggagtgaaaccagccaataaacagctg
aggacctcagtaggagataagttctgcagctccctgtctttactgatggaaacactgaat
gccaccacccctcattatgtgcgctgcattaagcccaatgatgaaaagctcccatttgaa
tatgactccaggagggtggtgcagcagctgcgagcctgtggagtccttgaaactattcgc
atcagtgcacagagctatccatccaggtggacctacattgagttttacagccgatacagt
atcctaatgtcacatcaggaggccgatgtcagggacaagaaacagacctgcaagaaagtg
ctgcagaggttgattcaggaccccaaccagtacaagtttggccgcacaaagatcttcttc
cgagccggtcaggtagcttatctagagaagctgcgtctggaccgactgagaggagcctcc
gtgaccatccagaaacactttcgtgggtggagccagaggaggaagtacctgcgcatgaga
caggcggccatcatcctccaacagtacatccgtggaaagaagacaatccgtaaaacagtg
actgctgcaacactgaagcagggctgggcatcagtggtgatccagagatactggaggggt
taccgcatgagacagatcttccaggtagtccgtctggcctccatcaccattcaggctttc
acacgaggttggatggcccgaaaacggtacaaaaagatgatggaggagcagaaagctctg
attctacagaagtacgccagagcatggctggcacggcggcgttttcaaaccatgcgtcgg
cttgtgctcaacgttcagctctcctacagggtgcagacactcaagaagaagattgaagag
cagaacaaagagaaccgtggattgatggaaagactgacaagcttggccaactctcacgct
cagacggtggacaggcttcaagttcttgaagtacagctggaaaaatcaaccaaccagaag
gcgtctttggaggcaagggagaagaaagtgaaagaagatgccagtgtgacaactgcacag
cttaaaaaggaaatagatgcactaaaccttgaaaagcagaacctggagaagaagtttgaa
gcttcgaccaaagaagcccaagaaagctttgatgagataaagaggggccttcaggaagag
aaagaatatgaagcaaggctgagaaaaattgcggagaacaacactgagatccagcgacat
gaccatgagagagaggtggaagccctgaaagaggagattaagagactgaaagaggagaga
gtcggtctgcagagaaagatcgaggaggcggacagggcaaactctgacctgcaggagcag
aatatccagctcaccaaacatatcaaggtcattcctgagctgcgcagggatctcaacaac
ctccaaaaccagaggaataacatggacaggaggatgaagcaacagtcggaacaagcacga
gctaaaatgaacgatattacgagacaacttctgggtggtgttgtcgaacaggaggttctt
ttggggctaaccccagacgactctgagaagatttatgaagttgaagacttgctaacagcc
tttgatggactgcagaaagcaaccagaatactggaaagccaccagagggagcagaaggag
agctatgagacccaagtggagggcttgaagttgaaagtggaccacctccaaaatgagaac
agcaagttgcaaaacctgttccaggagaaaagtaatgtcaacaagagcattcgccaagaa
gtgtccaggctcagcagcgagaactcagtgataccagaactgaaactgcaggcttcagag
ctgcagaggcaaaaacaagaactggaggtccgcatagaggagcagagcagagaactagca
gaaaaaactgaggagatcacgaacactcttcagaggaagattaaagaggagagctcacaa
cgcaggcactttgaggagaaagctgaagagctggaggagctgaagagggagcttcatggc
aaagtagaggagctggaagaggagaatgatcacttgaagagacaactgctgatggagatg
gaggccaagagcaaactgagacaggagacatcacagttaactgcagagaacatggacttt
gaggagcagctcgaccagaaagacagattaataaggaaactccagaatcaaataaagagc
cttgaaacatcacagaaagcagtgaagcaaacgtctgcgcccgcaattcccaaagattac
ctcggcatgttggagtacaagagagaggacgaatccaggctcattcagaacatcattctg
gagctgaagcccaaaggtgtggtggtcagtatgatgcctggcctgccggctaacatcctc
ttcatgtgcatccgccacgctgactacctgaacgatgaagtcaaactcaagtctctcatg
actgccatcatcaacggtgtcaaaaaggtcatcatgagttaccacaaagactttgagttg
ctgtcgttctggctctcaaacacatatcagctgctcaactgtctgaagcagtacagcggg
gaggaggagttcatgaaacaaaacactcctcgccagaagaagaactgcttgaagaatttt
gatttgtctgaacacagacagattctcagcgacatggccattcagatctaccaccagttt
atctcagtcatggagaagagcctcgctcctgcaattgtgcccggcatgttggagcacgag
agtttacagggaatctccagcatgaagccgacaggcttcaggaagcgttccaacagcatc
tacgaggactcggagacacacaccatctcctccatcattcagcagctcagtgtcttccac
tccaccatgagccagcatggcatggagcagggcctcatcaaacaggctgtcaagcaaatg
ttcttcctcattggtgcgaccgccctcaacaacatcatgctccgcaaagacatgtgctcc
tgcaggaagggaatgcaaatcaggtgtaacatcagttatctggaggaatggctgaaggag
aagcaaatgcaaagctctaacgccatggatacgctgaggccgctgtcacaggccgcctgg
ctgctgcaagtcaacaagtctactgatgatgacgccaacgaaatcactgaaaaatgcact
gagctcaaccctgttcagattgtcaagatcttgaactcgtacacacccattgatgatttt
gagaaaagggtgtcgtcgtcatttgtccgcaaagttcagtcgttactacatgaccgtgac
ggatccacacagctgatgcttgactcggactatcgtttccaggtcacgtttcctttctgc
ccgtcctcgcaggctctggagctgctgcaggtccccagcagccttcatcttggctttcta
accaggatctga
DBGET
integrated database retrieval system
