Epinephelus lanceolatus (giant grouper): 117261794
Help
Entry
117261794 CDS
T07331
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03022
Basal transcription factors
ely03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117261794 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
117261794 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117261794 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
ely03400
]
117261794 (gtf2h1)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117261794 (gtf2h1)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117261794 (gtf2h1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
117261794
NCBI-ProteinID:
XP_033490191
LinkDB
All DBs
Position
5:19895451..19904542
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFSNESSALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISADEFWANRLGDINNADPALSNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSLVVQGVKNPLVDLLSLEDKTLDEGYGVSTTLPSTSNSNRTVKES
SNSAIIKRFNHHSAMVLAAGSRKGETSADQASETSSTDGNSRDSDFFQPPVKKVKLQEAI
EYEDLQRENRPKTVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVNYIRHEMVNYKPNL
TQVLSSTTATSAIAALSPGGVLMQAATQQAINQMVPTEVQGELKHLYAAAGELLRHFWSC
FPVNTPFLEEKVMKMKSNLERFQMTKVRPFQEKIQRQYLSTNLTGHLEEMFQTAYSKFHI
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactgtcagaggaggtgctgctggtggtgaagaaggttcgccagaggaagcag
gatggcactctctatctgatggcggaacgtatagcctggggtccagaaggcaaagaccgc
ttcacagtcagccacctatacgcagatattcgctgtcagaagatcagtccagatggtaaa
gccaaaattcagctccagctggtgcttcacaccggcgagagtaccacattccacttttcc
aacgagagcagtgcgctcaaagacagagatgctgccaaggagctgctgcagcagctgctg
cccaagttcaagaagaaagccaacaaggaactggaggagaagaacaggatgcttcaagaa
gatccagtgcttttccagttgtataaggatctcgtggtgagtcaggtgatcagtgcagat
gaattctgggccaaccggttaggggacataaacaacgcggaccccgctttatccaacaac
aaacaggaagtcggtatatctggagcatttctggcagacattagacctcagacagatggc
tgcaatggcttgagatataatctgacagcggacattattgaatccatcttcagaacatac
cctgcagtgaagcagaagtacagtgaaaacgtgcctcataacctgacggagaaggagttc
tggacccgctttttccagtcccattattttcacagagaccgcatcaatacagggacacag
gatatcttctcagagtgtgccaagcaggatgaaaaggggttaaagtctctggtggttcaa
ggagtgaagaatcctttggtggacctcctgtcgttagaggataaaacattagacgagggt
tacggagttagcacaacgctgccctcaacttccaactcgaacaggacggtgaaggagagc
agcaactctgccatcataaagcggttcaaccaccacagtgccatggtgctggcagcaggc
tcacgcaagggggagacttcagctgaccaagcaagtgagacgagcagcacagatggaaac
tcaagggattctgacttcttccaacctcctgtaaagaaggttaaattacaagaagccata
gaatatgaagatctgcaaagggaaaacagaccaaaaacagttgcgttaaacctcaagaag
tctgacaggtatgctcacggtcctgtgccacttcagtcccaacagtatacgacaagccag
gatatcatcaactctgtcaactacatccgtcatgagatggtcaattacaaacccaacctc
actcaggttttgtccagcacaacagctacttctgccattgcagcactttctccaggtggt
gtcctcatgcaggcagcaacacagcaagccataaatcagatggtacctactgaggttcaa
ggagagttgaagcatctttatgcagctgctggagagttgttgagacacttctggtcctgt
ttccctgtaaacacaccgtttttggaggagaaggtgatgaaaatgaagtcaaacctcgag
agatttcagatgactaaggttcgtcctttccaggagaagattcagcgtcagtacttaagc
actaatctcacagggcatttggaggagatgtttcagacagcctacagcaagttccacatc
tggcaaacccgtcgcatgatgaggaaaacctga
DBGET
integrated database retrieval system
