Epinephelus lanceolatus (giant grouper): 117261829
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Entry
117261829 CDS
T07331
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
KO
K06245
laminin, beta 4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04510
Focal adhesion
ely04512
ECM-receptor interaction
ely04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117261829 (lamb4)
04518 Integrin signaling
117261829 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117261829 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB1
LAMB4
COG4_N
EzrA
Motif
Other DBs
NCBI-GeneID:
117261829
NCBI-ProteinID:
XP_033490247
LinkDB
All DBs
Position
5:complement(9456192..9490654)
Genome browser
AA seq
1825 aa
AA seq
DB search
MIFIFFIVFLPAAQLQDPQDPQDQCPGGSCNPQLGDLMVGRAAQLSASSTCGLDGPQNYC
IIGYLEEEQKCFTCDSRLPYNRYNNPNSHRIENVITTFDPERKMKWWQSENGVHRVSIRL
DLETVFQFSHLVLTFKSFRPAAMLVERSKDFGRSWKVFRYFAEDCLLHFPSVSNQPADSI
DDVVCDSRYSGSDPSTDGEVVLKALDPIFEIENPYAPNIQDLITLTNIRINFTRLFTLGD
TLLGRKRRNPEDKYYYALYNMVVRGSCFCNGHASQCTPVDGGRGDVFTQTGMVHGRCVCQ
HNTAGENCERCQDFHHDTPWRPGGENTANICRRCNCHGHSDSCHFDPAQFEATGGRSGGV
CEDCRNDRTGPQCERCRPFLYRDPQRATEDPQACIPCDCDRTGSQGGGLCDGLSGQCICK
ENVEGQRCDRCKHGFFNLRQDDPAGCQVCQCHVFGSVGTCDQQTGSCVCGHLATGPLCDR
CVDGFWGLGNSVYRCSPCDCDIGGAHSTRCSPEEGQCQCLPNMVGRRCSDPAPGYFLPPL
DYFLYEAELAAPLHGVGSPPPPPPPPPPPPPPPPPPAPTLPASTPPALTPPPSSSLLNPG
LLPQCEKYYREQGYDFKLSNGRVVLVRRTRRLARQRRQGQQNGIPLEPGHALQIIPRQRI
PGQPITWTGLGLVRVLDRAGLRFTVDNLPSSMDYQLAIRYEPESPSDWLASVSITPVSPG
DGGCSSDPTGTKTLVLPGNSRGGILDFPVCLNAGGRYFVDIVFNKLPGSDDPSSSHILID
SMGLIPSIESVQDFCSKSDLDSFRRFRCIGLAAELSPQEALPEVCEGLIKSMSARIHKGA
VPCGCNVVGSRGPSCTNQGGLCECKPNVIGRCCDTCAPLTFGFGPEGCQPCECDPRGSVS
ELCDQVRGQCACRSEVTGRRCDRCQTGFWGFPVCRPCECNRLSEVCDEETGECLNCREHA
TGPNCDRCMEGYHGNPVSRQPCQPCLCPDIQGSGRFFAISCHNDPQSLSMTCDCREGHTG
LRCDRCSPGFFGDLASPGASCEECPCNNNIDPDDRNACDSLTGECLHCLHNTMGSHCQDC
KTGYYGNALDQDCKECSCDRRGTEVTQCPLGSPCYCDPRTGQCPCRTGAMGVLCDECEDG
YWNLDGASGCQPCSCDPVNSFNNICDKVTGQCPCRPEFGGRQCDECGENHFGNPDLQCIS
CDCNLEGTERPSCDPESGECICRVGVTGIFCDECAPGYDSVFPTCEECHPCTTLWAGEVT
DVQRAAQRMRTFIPPDDLQPGGSSPHLRMFEMHSKLNDLANLTGLSPAKVEKVEKLSLMI
GKLKDSIDPYLILIDPSPLLNTEIDNIRLDFKKLLTRLKEKLNEDPDAEDEDVEELMEEI
QKRYKVFTSDEKRVRNANKALEDSMDTRQEVKRKLSMGSDKGDLAPVEKKIKELSVVDLN
RKVCGRPGLEDCSGCGGALCELGLGKRKCGGPNCDGVVPVSQKASETAEKTKNQLSTLPS
SLQESKNKLNDAKQAAQSTKDQAKDLQDRINDNIDSLSREKNRIKELLQRVKDHLTDEMV
PPEDVEKMAQAVLAIQPPRSPDQIQSMIIDINNLLSKSTNFQNDLKDLEEHAKTAQDLLQ
KAQEVKERTKNTDVLEIKKDIYQAERAQEKANDDLDAATLDRDVAKDRLRIVRDKLDDAA
WKLLKRQPQNLRDQIKDLKKKTDQNRVMAVDALASAVDAFKQSSDTKPELDEVRKQFELL
QQKSSNQTGQDDAAERVKKIKDEAEKMKKEVEDKLQQIQDLEKKIQQLIKSKEDKAAEVS
TLLDTVDSIRREISKRAETYPTCTA
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcatcttctttatagtttttcttccagcagctcagctccaggacccccaggac
ccccaggaccagtgtcctggtggctcctgcaatccccagcttggtgacctgatggtgggt
cgagcagctcagctgtcagcttcatccacctgcgggctggatggaccacagaattactgt
atcatcggatacctggaggaggaacaaaagtgtttcacatgtgactctcggctgccgtac
aatcgctataacaaccccaacagccaccgcatcgagaacgtcatcacgacctttgaccct
gagagaaaaatgaagtggtggcagtctgagaacggggttcatcgggtcagcatcaggctg
gatctggagactgtgttccagttcagtcatctggttctcaccttcaagagtttccgtccg
gcggccatgttggtggagcgatcaaaggatttcggacgaagctggaaagtctttcggtac
ttcgcagaagattgtttgcttcatttcccttcagtttccaatcagccggccgacagcatc
gatgatgtcgtctgtgacagcagatactctggatcagatccgtccactgatggagaggtg
gtgctgaaagctctggatcccatctttgagatcgaaaacccatatgcaccgaacatccaa
gatctgatcaccttgacaaatattcgtattaacttcactcgtctcttcacgttgggcgac
actctgctgggtcgaaagcgcaggaaccctgaggacaaatattactacgcgctttacaac
atggtggttcgaggtagctgcttctgtaacggacacgccagccagtgtacgcccgtggac
ggaggacgaggggacgtcttcacccagactggcatggttcacggtcgatgtgtctgtcag
cacaatacagccggagagaactgtgagagatgtcaggactttcaccatgacactccctgg
aggcctggaggagaaaacacagcgaacatctgcaggagatgtaactgtcacggtcactcg
gactcctgccactttgaccctgcgcagtttgaagcgacaggcggccgaagtggtggcgtg
tgtgaggactgccgcaatgacaggaccgggcctcagtgtgagcgatgtcgaccttttctg
tatcgagatccacagagagcaacagaggatccgcaagcctgcataccgtgtgactgtgac
cggaccggttctcagggaggcggtctgtgtgacggtctgagtggtcagtgcatctgtaaa
gaaaatgtggagggtcagcgctgcgatcgatgcaaacacggcttcttcaatctgagacag
gacgaccccgccggctgtcaggtgtgccagtgtcatgtttttggaagtgtcggcacatgt
gatcagcagacaggaagttgtgtgtgtggccatttggcaactggaccgctctgtgatcga
tgtgtggacggtttctggggtttgggaaactcagtgtacagatgctcgccctgtgactgc
gatatcggaggagctcacagcaccaggtgttctccagaggaaggacagtgtcagtgttta
cccaacatggtgggtcggcgctgctctgaccctgctcctgggtacttcctgcctccattg
gactacttcctgtatgaggcagagctcgctgctccactgcatggagttggttctcctcca
ccccctcctccgcctcctccacctcctccaccgccgcctcctcctcctgctcctactctt
cctgcttctactcctcctgctttgactcctcctccgtcttcttctctgttgaacccgggt
cttctacctcagtgtgagaagtattacagagagcagggttacgactttaaattgtctaat
ggacgagtcgttttggttcggaggactcgacgactcgcccgtcagaggaggcagggacag
cagaacggcatccctctggagccgggtcacgccctgcagatcatcccccgtcagagaata
cctggtcagccgatcacctggaccggcctgggattggtcagagtgttggaccgggcgggg
cttaggttcaccgtggacaatctcccgtcgtcaatggattaccagctggcgattcgttac
gagccggagtctccgtctgattggctggcttcagtcagcattactccagtgtcgccgggc
gacggtggctgcagcagcgacccgacaggaactaaaacgctggttcttcctggaaactcc
agaggaggtattctggattttccagtgtgtctaaacgccggcggccggtactttgtggac
atcgtctttaacaaactgcccggatctgacgacccctccagctcacacatcctgatcgac
tcgatgggtctgattcccagcatcgagtctgtccaagatttctgctccaagagtgacctt
gactctttccgccgctttcgctgcatcggattggctgctgagctcagtccacaggaggcg
ttaccggaagtctgtgagggacttatcaagagcatgtcggcacgaatccacaagggagct
gttccttgcgggtgtaacgtcgttggctctcgtggcccatcctgcactaatcagggaggg
ctctgtgaatgtaaacccaatgtgattggccgttgctgtgatacctgtgcaccactgaca
tttggcttcggacccgagggctgccaaccatgtgagtgtgaccctcgtggttcagtgtca
gagctgtgtgatcaggtcagaggtcagtgtgcatgtcgttcagaggtcacgggtcgacgc
tgcgatcgctgtcagactggattctggggtttcccggtctgtcgaccctgtgagtgtaac
agactgtcggaggtgtgtgatgaagaaactggagagtgtctgaactgcagggagcacgcc
acgggaccaaactgtgacaggtgtatggagggttaccatggtaaccctgtctccagacag
ccctgtcagccctgcctgtgtccagacattcagggcagcggacgattcttcgccatatcc
tgccacaatgacccacagtccctcagtatgacctgtgactgcagggaggggcacacaggt
ctgcgctgcgacagatgcagccctggtttctttggcgacctggcatcgccaggtgccagc
tgtgaggagtgtccctgcaacaacaacatcgacccggatgatcgcaacgcctgtgacagc
ctgacgggagaatgtctgcactgcctccacaacacgatgggatcacactgccaagactgc
aaaactggttactatggcaacgccctggaccaggactgcaaagagtgctcttgtgatcga
cgggggacagaggtgactcagtgtcctctggggagcccctgttactgtgatcccaggacg
ggacagtgtccctgcaggacaggggcaatgggcgtcctctgtgacgagtgtgaggacggg
tactggaacctggatggagcctcgggatgtcagccctgcagctgtgatcctgttaactct
ttcaacaacatctgtgacaaggtgacgggacagtgtccgtgtcgtcccgagtttggagga
agacagtgcgacgaatgtggagagaatcattttgggaatccagacctgcagtgtatctct
tgtgactgtaacctggaggggactgagcgtccatcatgtgaccctgaatcgggtgagtgt
atctgtcgcgtcggtgtcaccggtatcttctgtgacgagtgcgcccctggctatgactca
gtgttcccaacatgcgaggagtgccacccatgcaccaccctctgggccggggaagtcact
gatgtccagcgagccgctcagaggatgagaaccttcatccctcctgatgacctgcagccc
ggaggcagtagcccgcatctacggatgtttgagatgcactctaagctgaatgacctcgcc
aatctgacgggactctccccagcaaaggtggagaaggtggagaaactgagtttgatgata
gggaagctgaaagactccatcgacccatacctgatcctgatcgacccgtctcctctcctc
aacactgaaatcgacaacattcgcctggattttaagaagcttctaaccaggctgaaggag
aaactcaacgaggatccggacgctgaagatgaagatgtggaggagctgatggaagagatc
cagaagcgctataaagtcttcacgtcggacgagaagagagtgagaaacgcaaacaaagcc
ttggaggactccatggacaccagacaggaagtcaaacgcaaactgagcatgggcagcgac
aaaggagacctggcaccggtggagaagaagatcaaagagctcagcgtggtcgacctcaac
cgaaaggtctgtggacgaccaggtctggaggactgttctgggtgtggtggagctctgtgt
gagctgggtctgggaaaaaggaaatgcggaggtccaaactgtgacggagtcgttcctgtc
agtcagaaagcttcagagacagcagagaaaacaaagaaccaactcagcacacttccatcc
agtctgcaggagtccaagaacaagctcaatgatgccaaacaggcggctcagagcaccaaa
gaccaggccaaagacctccaggaccggatcaacgacaacatagactctctgtcgagagag
aaaaatagaatcaaggagcttctccaacgagtgaaagaccacttgaccgatgaaatggtt
cctccagaagatgttgagaaaatggcccaagctgttctagccatccagccaccacgatcg
cctgatcagatccaatcaatgatcattgacatcaataatctgctgtctaagtctaccaat
ttccagaatgacctgaaagacctggaggagcacgccaagaccgctcaagacctgctgcag
aaagctcaggaagtcaaggagcggacgaagaacactgatgtgctagagatcaagaaagac
atttatcaagcagagagagctcaggaaaaagccaacgacgacctggacgcagccacctta
gacagagacgtggccaaggacagactccgtattgtgagagacaaactggacgacgctgca
tggaagctgttgaaacgtcaaccacaaaatctgcgagaccagatcaaagacctgaagaag
aaaactgaccagaacagagtgatggctgtagacgccctggcgtcagctgtcgatgctttt
aaacagagttccgacacaaaaccagagctggacgaagtgaggaagcagtttgagctttta
cagcagaagagctcgaatcagacaggtcaggatgacgctgcagaacgagtgaagaaaatc
aaggacgaggcggagaagatgaagaaagaggtggaggacaaactgcaacagatacaagat
ctggagaagaagattcagcaactgatcaagagtaaagaggacaaagcagctgaagtgtcc
acgctgttggacacggtggattcaattcgacgggaaatctccaaacgagccgaaacatac
cccacctgtactgcataa
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