Epinephelus lanceolatus (giant grouper): 117261886
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Entry
117261886 CDS
T07331
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03013
Nucleocytoplasmic transport
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117261886 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
117261886 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117261886 (thoc2)
03041 Spliceosome [BR:
ely03041
]
117261886 (thoc2)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117261886 (thoc2)
Spliceosome [BR:
ely03041
]
Complex C
Other components
EJC/TREX
117261886 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117261886 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
117261886
NCBI-ProteinID:
XP_033490342
LinkDB
All DBs
Position
11:complement(42311170..42343190)
Genome browser
AA seq
1564 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGSEVKDIQAALYELCWQVVQGNLKL
DLVVSVLGDMMELRDDMPSILADVFSILDLETGALEEKNKRDHYTQLVGACLFFVPEVIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHVVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPVDATIVEEHKRDISE
AKQIARKLVMVVLPSEKSEDKDKEKEKEEEKNDKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYASSHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVMHPLRNKRAPRPVESFE
DLQRDTFSMICYLGPHLSHDPILFAKIVRLGKGFMKEYQSESRPEVKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYDREVNKL
KVQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAVYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPANQQNGPG
STGKPATSTSKTEEGTSEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKAEEKSSKDDKAKAGNGEPMEPSRERDAIKESKSKEKGDRSAVAGSLKSPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNSNEPKESTSKHHANYNSVARSKSRERETEKKDSDN
TQGRSKEKKEEKDRKDRKRDHAVNDRETSQESKRRKDENGTNSSKNSKSTSPSCDSPLSA
EKEKSKRSKSSSKEKAESLKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagttcgtacaactctgcaaagaactcacagagaaaacagatcatggaagtgaggttaaa
gatatacaggccgccttatacgagctctgctggcaggttgtacaagggaacctgaagttg
gatctggtcgtcagcgtcctcggggacatgatggaactccgagatgacatgccatcaatt
ttagcagacgtgttcagtatactagatttagagactggagcattggaagaaaaaaacaaa
cgtgaccattacacacaactggtgggagcatgtttgttctttgttccggaggtcatcctg
aaggagagactggatccagaaacccttgagtctcttggacttataaaacaagcccatcag
ttcaaccagaagattgtgaaaatcaagactaaactattttacaagcaacagaagtttaac
ttgctaagggaggagaatgagggctacgccaaacttatcaccgagcttggccaagacctc
tcaggcaacatcaccagccacgtcgtcctggagagcatcaagtccctcataggatgtttt
aacctggaccctaatcgtgttttggacataatcctggaggtgtacgagagtcgatctgac
caagacgagttcttcctgtctctcatcaagtcttacatgtgtgagccactcaccctttgc
cacatcctgggctttaagttcaaattctaccaggagccgaacgaggaaacccccaagtca
ctttaccacattgctgctgctctgcttcaccacaacctgatagagctggaagatctctac
gtacatcttatgccagtagatgccaccatcgtagaggaacacaaacgagatatctcggag
gccaagcagattgcacgcaagctggtcatggttgtgttgccctcagagaaaagtgaagac
aaggacaaggagaaggaaaaggaggaggagaagaatgacaagccacctgataaccagaag
cttggtctgctggaagcgctgctcagaatcggagactggcaccacgcccagagtattatg
gaccagatgccgtccttctacgcctcctctcacaaggccattgcgctggcactctgccag
cttgtgcacctgactgtggagcctctttacagaagggccggcctcccaaaaggggcaagg
ggatgtgtgatgcatccactgaggaacaagcgggcgcctcggcctgtggagagcttcgag
gacctgcaaagggatacgttcagcatgatctgctacctgggccctcacctctctcatgac
cctattctctttgccaagattgtgcgtctaggcaagggcttcatgaaagagtaccaaagt
gagagcagacctgaggtcaaagacaaaatggaaacactcttgagttgtttcctgagcatt
gcagaccaggtgctactcccttctctctccctgatggagtgtaatgcttgcatgtctgag
gaactgtggggcctcttcaaactctttccctaccagcacaggtaccggttatatggacag
tggaagaatgagacatactccagccatccactgttggtcaaagtcaaagctcagactgtg
gaaagggccaaatacattatgaagcgtttgaccaaagagaatgtgaaacaatctggaagg
cagattggcaagctgagccatagcaatcccaccatcctctttgattatatgctgtctcag
atccagtggtacgacaacctcatcgttccagtggtggattccttgaaatacctcacatcc
ctcaactatgatgtcttggcctattgcatcatcgaggctctggccaaccccgagaaggag
aagatgaagcatgacgacaccaccatctcctcgtggcttcagagcctggcaagtctgtgt
ggagccgtgttcagaaaatacccaattgagctggctggccttcttcagtatgtcaccaat
cagctaaaagcagggaagagttttgacctgttgatcctgaaagaggtggtgcagaaaatg
gctggcattgagatcacagatgagatgacttcagagcagctagaagccatgaccggaggg
gagcaactcaaagctgagggcggctacttcggccagatcaggaacactaagaagtcgtcg
cagcggctgaaggatgcactgttggaccacgaattggccttgcctctgtgtttactcatg
gcccagcagaggaatggtgtggttttcttagagggtggagagaaacacctcaaacttgtt
ggccacctctatgaccagtgtcatgacacgttggtgcagtttggtggctttctggcctcc
aaccttagcactgaggactacatcaagcgggttccctccattgacatcctttgtaaccag
ttccacactccacatgatgctgccttcttcctgtctcggccaatgtacgcccatcaaatt
ttgtctaagtatgatgagctgaagaaagcagaaaaaggcaaccggcagcagcagaaggtg
cacaagtatgtggcagcctgtgaacaggtgatgacaccggtgcacgaagctgtggtgtcc
ctacatccagccagggtctgggacgacctccgccctcagttctacgccactttctggtct
ctcaccatgtacgacctggctgttccacactctgcttacgaccgtgaggtcaacaagctt
aaggtccagatcaaggccatcgaggagaacccggagatacccatgaataagaagaagaag
gagaaggaacgctgcactgccctgcaggaaaaactgcaggaggaggaaaagaagcagctg
gagcacgtccaaagggttctgcaccgcctcaaactggagaaagacaactggttgttggcc
aaatccacaaagaacgagaccataacgaagttcctgcagctctgtctgtttcctcgctgc
atcttctcctctatcgacgctgtgtactgcgcccgctttgtcgagctcgtccaccagcag
aagacacccaacttctgcaccctgctgtgctatgacagggtgttctctgccatcatttat
actgtggccagctgtacggagaatgagtcacaccgctacggacgcttcctctgctgcatg
ctggagacggtgacccgctggcacagcgaccgtgcagtctatgagaaggagtgcgtcaat
taccccggcttcttgaccatcttcagagccacaggcttcgatggcgggaacaaagcagat
cagcttgattatgagaacttcaggcatgtggtgcacaagtggcactacatgctgactaaa
gcttcagttcactgcctggagacgggagattacacccacatccgcaatattctcatcgtg
ctcaccaagatcctgccctgctaccccaaggtcctgaacctgggccaagcactggagtgc
cgtgtccacaagatctgcctcgaagagaaggacaagaggcctgacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggtccctgagaatgagttt
caccacaaggagcagccagcacgcagcgccacccccgccaatcaacagaacggccccggc
agcacaggcaagcccgccaccagcacgagcaagacagaggaggggacgtcagaggatggt
gatcggggcaaggataaatctcaggggaccacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaacgggaatggtgctctcaacagcaccaaagccgtcaaa
gagcgggacgacaaagagaagagcgggaaggagaaaaaagagaaaaaggaaaagacacca
ggcagtactcccgagacaaaggcagagaaccgtcgggagaagcagagagacgagagagcg
gggaaggaggagcgggcggcacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtgaaggccgaggagaagagcagcaaagacgacaaggccaaagccggcaacggggag
cccatggagccatccagggagcgcgatgccattaaggagtccaaaagcaaggagaaagga
gacaggagcgctgtggccgggtccctcaagtcaccagttcccagatcagagtcagctgaa
tctgagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacgccaactac
aattcagttgcccggtccaagagcagagagagagagacggagaagaaagactcagacaac
acacaaggccgatccaaagagaagaaggaagagaaggatcgcaaagacaggaaaagagat
catgctgtcaatgaccgtgagacgagccaagagtccaaacgtagaaaggatgagaacgga
accaattcctctaaaaacagcaagagcacaagtccttcctgcgactccccgctttctgct
gagaaagagaagagcaaaagatccaaatcttccagtaaagagaaagcggagtcactgaaa
cctgagcggacgtcctctggaggcaaaaaggagtccagacacgataaagagaaatctgaa
aagaaggaaaagagggacagcagcggaggaaaagaagaaaaaaagcatcataaatcctct
gacaagcacagataa
DBGET
integrated database retrieval system