KEGG   Epinephelus lanceolatus (giant grouper): 117261886
Entry
117261886         CDS       T07331                                 
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03013  Nucleocytoplasmic transport
ely03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117261886 (thoc2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    117261886 (thoc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ely03019]
    117261886 (thoc2)
   03041 Spliceosome [BR:ely03041]
    117261886 (thoc2)
Messenger RNA biogenesis [BR:ely03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117261886 (thoc2)
Spliceosome [BR:ely03041]
 Complex C
  Other components
   EJC/TREX
    117261886 (thoc2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117261886 (thoc2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 117261886
NCBI-ProteinID: XP_033490342
LinkDB
Position
11:complement(42311170..42343190)
AA seq 1564 aa
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGSEVKDIQAALYELCWQVVQGNLKL
DLVVSVLGDMMELRDDMPSILADVFSILDLETGALEEKNKRDHYTQLVGACLFFVPEVIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHVVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPVDATIVEEHKRDISE
AKQIARKLVMVVLPSEKSEDKDKEKEKEEEKNDKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYASSHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVMHPLRNKRAPRPVESFE
DLQRDTFSMICYLGPHLSHDPILFAKIVRLGKGFMKEYQSESRPEVKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYDREVNKL
KVQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAVYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPANQQNGPG
STGKPATSTSKTEEGTSEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKAEEKSSKDDKAKAGNGEPMEPSRERDAIKESKSKEKGDRSAVAGSLKSPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNSNEPKESTSKHHANYNSVARSKSRERETEKKDSDN
TQGRSKEKKEEKDRKDRKRDHAVNDRETSQESKRRKDENGTNSSKNSKSTSPSCDSPLSA
EKEKSKRSKSSSKEKAESLKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSS
DKHR
NT seq 4695 nt   +upstreamnt  +downstreamnt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagttcgtacaactctgcaaagaactcacagagaaaacagatcatggaagtgaggttaaa
gatatacaggccgccttatacgagctctgctggcaggttgtacaagggaacctgaagttg
gatctggtcgtcagcgtcctcggggacatgatggaactccgagatgacatgccatcaatt
ttagcagacgtgttcagtatactagatttagagactggagcattggaagaaaaaaacaaa
cgtgaccattacacacaactggtgggagcatgtttgttctttgttccggaggtcatcctg
aaggagagactggatccagaaacccttgagtctcttggacttataaaacaagcccatcag
ttcaaccagaagattgtgaaaatcaagactaaactattttacaagcaacagaagtttaac
ttgctaagggaggagaatgagggctacgccaaacttatcaccgagcttggccaagacctc
tcaggcaacatcaccagccacgtcgtcctggagagcatcaagtccctcataggatgtttt
aacctggaccctaatcgtgttttggacataatcctggaggtgtacgagagtcgatctgac
caagacgagttcttcctgtctctcatcaagtcttacatgtgtgagccactcaccctttgc
cacatcctgggctttaagttcaaattctaccaggagccgaacgaggaaacccccaagtca
ctttaccacattgctgctgctctgcttcaccacaacctgatagagctggaagatctctac
gtacatcttatgccagtagatgccaccatcgtagaggaacacaaacgagatatctcggag
gccaagcagattgcacgcaagctggtcatggttgtgttgccctcagagaaaagtgaagac
aaggacaaggagaaggaaaaggaggaggagaagaatgacaagccacctgataaccagaag
cttggtctgctggaagcgctgctcagaatcggagactggcaccacgcccagagtattatg
gaccagatgccgtccttctacgcctcctctcacaaggccattgcgctggcactctgccag
cttgtgcacctgactgtggagcctctttacagaagggccggcctcccaaaaggggcaagg
ggatgtgtgatgcatccactgaggaacaagcgggcgcctcggcctgtggagagcttcgag
gacctgcaaagggatacgttcagcatgatctgctacctgggccctcacctctctcatgac
cctattctctttgccaagattgtgcgtctaggcaagggcttcatgaaagagtaccaaagt
gagagcagacctgaggtcaaagacaaaatggaaacactcttgagttgtttcctgagcatt
gcagaccaggtgctactcccttctctctccctgatggagtgtaatgcttgcatgtctgag
gaactgtggggcctcttcaaactctttccctaccagcacaggtaccggttatatggacag
tggaagaatgagacatactccagccatccactgttggtcaaagtcaaagctcagactgtg
gaaagggccaaatacattatgaagcgtttgaccaaagagaatgtgaaacaatctggaagg
cagattggcaagctgagccatagcaatcccaccatcctctttgattatatgctgtctcag
atccagtggtacgacaacctcatcgttccagtggtggattccttgaaatacctcacatcc
ctcaactatgatgtcttggcctattgcatcatcgaggctctggccaaccccgagaaggag
aagatgaagcatgacgacaccaccatctcctcgtggcttcagagcctggcaagtctgtgt
ggagccgtgttcagaaaatacccaattgagctggctggccttcttcagtatgtcaccaat
cagctaaaagcagggaagagttttgacctgttgatcctgaaagaggtggtgcagaaaatg
gctggcattgagatcacagatgagatgacttcagagcagctagaagccatgaccggaggg
gagcaactcaaagctgagggcggctacttcggccagatcaggaacactaagaagtcgtcg
cagcggctgaaggatgcactgttggaccacgaattggccttgcctctgtgtttactcatg
gcccagcagaggaatggtgtggttttcttagagggtggagagaaacacctcaaacttgtt
ggccacctctatgaccagtgtcatgacacgttggtgcagtttggtggctttctggcctcc
aaccttagcactgaggactacatcaagcgggttccctccattgacatcctttgtaaccag
ttccacactccacatgatgctgccttcttcctgtctcggccaatgtacgcccatcaaatt
ttgtctaagtatgatgagctgaagaaagcagaaaaaggcaaccggcagcagcagaaggtg
cacaagtatgtggcagcctgtgaacaggtgatgacaccggtgcacgaagctgtggtgtcc
ctacatccagccagggtctgggacgacctccgccctcagttctacgccactttctggtct
ctcaccatgtacgacctggctgttccacactctgcttacgaccgtgaggtcaacaagctt
aaggtccagatcaaggccatcgaggagaacccggagatacccatgaataagaagaagaag
gagaaggaacgctgcactgccctgcaggaaaaactgcaggaggaggaaaagaagcagctg
gagcacgtccaaagggttctgcaccgcctcaaactggagaaagacaactggttgttggcc
aaatccacaaagaacgagaccataacgaagttcctgcagctctgtctgtttcctcgctgc
atcttctcctctatcgacgctgtgtactgcgcccgctttgtcgagctcgtccaccagcag
aagacacccaacttctgcaccctgctgtgctatgacagggtgttctctgccatcatttat
actgtggccagctgtacggagaatgagtcacaccgctacggacgcttcctctgctgcatg
ctggagacggtgacccgctggcacagcgaccgtgcagtctatgagaaggagtgcgtcaat
taccccggcttcttgaccatcttcagagccacaggcttcgatggcgggaacaaagcagat
cagcttgattatgagaacttcaggcatgtggtgcacaagtggcactacatgctgactaaa
gcttcagttcactgcctggagacgggagattacacccacatccgcaatattctcatcgtg
ctcaccaagatcctgccctgctaccccaaggtcctgaacctgggccaagcactggagtgc
cgtgtccacaagatctgcctcgaagagaaggacaagaggcctgacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggtccctgagaatgagttt
caccacaaggagcagccagcacgcagcgccacccccgccaatcaacagaacggccccggc
agcacaggcaagcccgccaccagcacgagcaagacagaggaggggacgtcagaggatggt
gatcggggcaaggataaatctcaggggaccacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaacgggaatggtgctctcaacagcaccaaagccgtcaaa
gagcgggacgacaaagagaagagcgggaaggagaaaaaagagaaaaaggaaaagacacca
ggcagtactcccgagacaaaggcagagaaccgtcgggagaagcagagagacgagagagcg
gggaaggaggagcgggcggcacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtgaaggccgaggagaagagcagcaaagacgacaaggccaaagccggcaacggggag
cccatggagccatccagggagcgcgatgccattaaggagtccaaaagcaaggagaaagga
gacaggagcgctgtggccgggtccctcaagtcaccagttcccagatcagagtcagctgaa
tctgagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacgccaactac
aattcagttgcccggtccaagagcagagagagagagacggagaagaaagactcagacaac
acacaaggccgatccaaagagaagaaggaagagaaggatcgcaaagacaggaaaagagat
catgctgtcaatgaccgtgagacgagccaagagtccaaacgtagaaaggatgagaacgga
accaattcctctaaaaacagcaagagcacaagtccttcctgcgactccccgctttctgct
gagaaagagaagagcaaaagatccaaatcttccagtaaagagaaagcggagtcactgaaa
cctgagcggacgtcctctggaggcaaaaaggagtccagacacgataaagagaaatctgaa
aagaaggaaaagagggacagcagcggaggaaaagaagaaaaaaagcatcataaatcctct
gacaagcacagataa

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