Epinephelus lanceolatus (giant grouper): 117261997
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Entry
117261997 CDS
T07331
Name
(RefSeq) transcription factor SOX-6-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117261997
Transcription factors [BR:
ely03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117261997
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
CBF
Motif
Other DBs
NCBI-GeneID:
117261997
NCBI-ProteinID:
XP_033490496
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All DBs
Position
11:45979304..46123578
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AA seq
728 aa
AA seq
DB search
MMSSMRATPPFHPPSEEEEAMGQDNVAWAGDEREGPKETPSPSSHERPHPDELQPIREKL
TEAEWENTAPAAMDNESSKGCSVYSYQTNSTSPPKPEECSRDRGEPMSGLAFGTPERRKG
SLADVVDTLKQKKLVELTKTEQDEPTCMERLLSRDWKERVDRLNANELLGEVKGTPESLE
EKEHQLSTMIGQLISLREQLLSAHDEQKKMAASQLEKQRQQMELARQQQEQVGMVTWCHD
VIVTVQGHMPPMMIPVFPHDQRSLAAAAAAQQGFLFPPGMSYKPGENYPMQFIPSTMAAA
AASGLSPLQLQQLYAAQLASMQISPGAKMASLPQAPNSSGPLSPSALKSEKRASSPVAHI
KSFVRRLLPAVSVALPRHMFCACVFLLFFVSQLNPAVSFIVMTITVFPRDPTERCQAHTQ
GLVLRALVLAAGVTFLTFIKEPLIFPVFQERLHYETLSQHLGKLGDDAGKMVHRVIDLTR
PEDLDGSNITEARVFREARGRNNAEPHIKRPMNAFMVWAKDERRKILQTFPDMHNSNISK
ILGSRWKSMTNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQM
MRSRRQEMRQFFVGPQPPMPLGSSPGGVGVYPGAITMATTATPSPHLTSDCSSNSASPEP
AIPVIQSTYGMKSEPGGGGSNGGGMGALDLPSDPANGDDDMDMYEDFEDEPKSDYSSDHE
TQEAVSAN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttccatgcgagcaacgcctcccttccacccaccgtctgaggaagaggaagcg
atgggtcaggacaatgtggcctgggccggtgacgagcgagagggcccgaaggagacgcca
tctccctcttctcatgagcggccccaccctgacgagctacagccaatcagagagaagctg
acggaggctgagtgggagaacacggcgcctgctgcgatggacaatgagagcagtaaaggc
tgctccgtctactcctaccagactaactctacctctccacccaagccagaggagtgttcc
agggatcgcggggagcccatgagcggcctcgccttcgggacgccggagcgccgtaaagga
agcctggcagacgtggtggacacactgaaacagaagaaactggtggagctgaccaagaca
gaacaagacgagccaacctgcatggagaggctcctctccagggactggaaggagcgcgtt
gatcgtctgaacgctaatgagctgctgggggaggtcaaaggtacgccggagtcgctggag
gagaaggagcaccaactctccactatgatcggtcagctgatcagtcttcgggagcagctc
ctctctgcccacgacgagcagaaaaagatggccgcctcacagctggagaagcagagacaa
cagatggagctggcccggcagcagcaggagcaggtagggatggtcacatggtgtcatgac
gtcatcgtcacggtccagggtcacatgcctccgatgatgatcccagtgtttcctcacgac
cagcggtctctggctgccgccgccgccgcacagcagggcttcctcttcccaccgggcatg
tcctacaagccaggtgagaattaccccatgcagttcattccatccacaatggcagctgca
gcggcgtctggactcagcccgttacaactacagcagctgtacgccgcccagctggcaagc
atgcagatctcaccaggagccaagatggcttccctcccgcaggctcccaactcctccggt
cccctttccccctccgccctgaagagcgagaagagagcgtccagtcctgtcgctcacatt
aagtcctttgttaggcggttgcttcctgcggtgagcgtggcactgcccaggcacatgttc
tgcgcctgtgtctttcttttattttttgtctctcagctcaacccagcagttagttttatt
gtcatgaccatcacagtcttcccccgtgacccaactgagaggtgccaggctcacacacag
ggcttagtgcttagggctttagttttggcagctggcgtcacgtttctcacattcattaaa
gaacctttgatatttcctgtgtttcaggagcggctgcactacgagactctgagccagcac
ctggggaagcttggggacgatgctgggaagatggtccatcgagttatcgacctgacgaga
ccagaagatctggatggaagtaacatcacagaggcgcgagtgttcagggaggcgcggggc
aggaacaacgccgagcctcacatcaagagacccatgaacgccttcatggtgtgggccaaa
gacgagaggaggaagatcctgcagaccttccccgacatgcacaactccaacatcagcaag
atcctcggctctcgctggaaatccatgaccaaccaggagaagcagccgtactacgaggag
caggcccgcctgagtaaaatccatctggagaaatatcccaactacaagtacaagccgcgg
cccaagagaacctgcatcatcgacggcaagaagctgcgcatcggagagtacaagcagatg
atgaggtcacggcgtcaggagatgaggcagttctttgtcgggcctcagccaccgatgcct
ctcggcagcagcccaggcggagtgggagtttacccgggtgccattaccatggcaacgaca
gccacaccgtccccgcacctgacctcagactgctccagcaactcagccagccccgaaccc
gccatcccggtcattcagagcacgtacgggatgaagtccgagcccggcggcggaggcagc
aatggtggcggtatgggagccttggatctgcccagcgaccccgccaacggagacgacgac
atggacatgtacgaggactttgaggacgagcccaagtcagactatagcagcgaccacgag
acacaggaggccgtcagcgccaactga
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