Epinephelus lanceolatus (giant grouper): 117262057
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Entry
117262057 CDS
T07331
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04260
Cardiac muscle contraction
ely04261
Adrenergic signaling in cardiomyocytes
ely04814
Motor proteins
ely04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117262057 (tpm1)
04820 Cytoskeleton in muscle cells
117262057 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117262057 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
117262057 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ely04812
]
117262057 (tpm1)
04147 Exosome [BR:
ely04147
]
117262057 (tpm1)
Cytoskeleton proteins [BR:
ely04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
117262057 (tpm1)
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of microglial cells
117262057 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Crescentin
TMF_DNA_bd
DUF745
Lebercilin
CENP-F_leu_zip
ATG16
DUF3450
PUMA_CC
Laminin_I
DUF1664
SlyX
DUF16
TMP_N
FPP
Motif
Other DBs
NCBI-GeneID:
117262057
NCBI-ProteinID:
XP_033490581
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All DBs
Position
11:complement(24237471..24250623)
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AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEGDKKAAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELSESKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccattaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagcagagcaggctgagggagacaagaaggcagcagaggacagaagcaaacagcttgag
gacgatttggtagctctgcagaagaagctgaagggaactgaggatgagctggacaagtac
tctgaggctcttaaagatgcccaggagaaacttgagctggctgagaagaaagccaccgat
gctgagggagatgtcgcatcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctggctactgccctgaccaagctggaggaagctgagaaggctgct
gatgagagcgagagaggcatgaaggtcattgagaacagggccatgaaggacgaggagaag
atggagctgcaggagatccagctgaaagaggccaagcacatcgctgaggaggctgaccgc
aaatatgaggaggtggcccgtaagctggtcatcattgagggtgacctggagcgtacagag
gagcgcgccgagctgtcagaaagcaaatgctctgagcttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccaggctgagaagtactcacagaaggaggacaaa
tatgaggaggagatcaaggtcctcaccgacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccattgatgacttggaagatgagttg
tacgctcagaaactgaagtacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacttccatataa
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