Epinephelus lanceolatus (giant grouper): 117262079
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Entry
117262079 CDS
T07331
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117262079 (tdrd12)
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
117262079 (tdrd12)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117262079 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117262079
NCBI-ProteinID:
XP_033490636
LinkDB
All DBs
Position
11:39389467..39417263
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AA seq
1406 aa
AA seq
DB search
MPTISILKVESPSCLWGRVVQLTGGDAETTDQYDNLLAQMNLFYHDVTQDLHKLKPTSLE
EGQVCVVYWSVIKSWCRAVVESIIMDSVSCQAHCLLVDHGERLIVPSDQIQVVAQRFLQL
PYWVRKFHLARIKPKTLRVSVFEEKAKLIPSTRWDSSATLYLHNLLQASTLSEAVLLESE
SDSTSIELYLTVRNIKICVNDDLVAKKFAYYSRESADNCGLEEVDQYPYMLPSSILTQTD
SKKSSAQTQQPHVMSQSLGADRAGDWLAAPSSPQSPQHELKTCDEGSRSEVTDEHLSPGR
QSKNGSDAAAAAESDSSEDTDSSLAAALTKNLNLFRFLKFLNPASSYQQAAPSESQHEEL
KDCQPEESTAASSIYTGQEVSSSSSSRSVESGPTEKTWRVEEDWACSRLLEWLNPEPLNP
DPDAADDAVVPRDPRKSGILVHSALPMEPCTSLDDAPVTDTLRRVLRRKQYSSLSPADCC
SWPAVAQGFNTVIVSHNADQPLSYLGPLLTHILLNTIFTSLTSSAGPVVVLLCPGWEKVQ
VVYDLLEEMEITSVLHPFIVLLGIGKNEAKDVRIPKNCLLLVTTPFSLVRLLSCHCFLFL
RLYHLVLDEADQLFTLAPDQMATILQHFQKVTSSEEKASCPQQLVAVAKRWTSHMEGLLA
NHMPYPCIFLTVPKEAALYGDVQQIILMTLESSKASVLLGALDFNPDVGQKTLIVANSVQ
EAEDVFKAVSSKSAFCLKTHEQSTYLFDFVIQQWRKDIGPGTHVILVTTNECLKCLGIRD
ATCVVHYGFPISPKVFGSRLLCMAENFRNLSTRVSMDQDQTGSRHLTRSVLLISERNACH
VVGVLRYLERTNALLPPELLSFAQGIRVAREDQKTNKPLCSYLKSFGVCRDSSVCPDRHR
FISQLDKSELPASGVIEVVPLYIKTASVFYGRIVRNEDGGFQSMASEMTSYYADKKPGAE
EMLEGGLYTVQEDDVFHRVKILSVPDRGDRLFFSVLVRFIDVGKEEEVKSHQILQLPEQF
HSLPGQAIEIIVCRVKPVDAEIDWHPKVTRAISQKIRGLQHRARAVLSLGNTVFVDPMVR
MTRVPGTKTVINEYSVQSEIITSGMGVSNPEHLDLLNALCQESSKQTSHSSGSEDGPVSL
EVRIKAEEEVLPKTFRAAEVSQLDDLPHLEPCEPLSPVSSVIQSLVPAPPTPAAVELHLV
PVCDQNGLLDSQAAFGQTNTHTEQMMRIVDGGELSPMTSQPAPLNPCENGDDQSNSLEVI
STNETDCDDSIKSFHPLLRWYQTSDSVTVTVKLMNPERQRCDFYPDRVVYSGRANGRTYR
ADLQLHAHIAADRCCWEMKSNEPVLKLVKQQQGHWERLLRNKNIFVSYDMEHLEEDEGRT
PNGLCFVENTGKDYWYVNSESGSESD
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaatatcaattttgaaggttgagagcccgtcttgcctctggggtcgggttgtt
cagcttaccggcggtgatgcagagaccacagaccagtacgacaatctgctggctcaaatg
aacctcttctaccacgatgtcacccaggacctgcacaagctgaagcccacatcgttagag
gagggacaggtgtgtgtggtgtactggtcagtgataaaatcatggtgtcgagctgtggtg
gagtcgatcattatggactcggtgtcctgtcaggctcactgcctcctggtcgaccacgga
gaacgactcattgtcccctcagaccagatccaagttgttgcgcaaaggttcctccagctg
ccttactgggtgaggaagttccacctggcaagaatcaaaccaaaaaccctgcgagtgtct
gtctttgaggagaaggcaaaactcattccgtccactcggtgggacagctccgctacactc
tacctgcacaacctgctccaagcatcgactctgtcagaggccgtgttgttagagtccgag
tcagactccacctccattgagctctacttgactgtacgaaacatcaagatatgtgtgaac
gacgatctggtggccaagaagtttgcatattacagcagagagtcagctgacaactgcggg
ctggaagaggtggaccaatatccctacatgctgccttccagtatcttaacccagactgac
tcaaaaaagtcatcagcacaaacccaacagcctcacgtgatgtcacaaagtctgggtgca
gacagagcaggtgattggctggcagctccctcttcacctcagagcccacaacatgagctg
aagacctgtgacgaaggcagcaggtcagaggtcacagatgaacacctgtctccgggccgt
cagtcaaagaatggctcagacgcggctgctgctgcagagagtgactcgtcagaggataca
gactcgtctctggctgcagctctcaccaaaaacctaaatctgttcaggttcctgaagttt
ctgaatcccgccagcagctaccagcaggcggctcccagtgagagtcagcatgaagagcta
aaagactgtcaacctgaagagtcgactgcagcctccagcatctatacaggacaggaagtc
agttcgagcagttcgagcagatcagtggagtcaggaccaacagagaagacgtggagggtt
gaagaggactgggcctgttcacgccttttggagtggttgaacccggagcctctgaacccc
gatccagatgctgcagatgatgcggttgttcccagagatcccagaaagagtgggattctg
gtgcactctgccctcccaatggagccctgcactagtttggacgatgcccccgtcacggat
actctccgcagggtgttgcggaggaagcagtacagctctttgtctccagctgactgttgc
agctggccagctgtggctcaagggttcaacaccgtcatcgtctcccataatgctgaccag
ccactcagctacctcggcccgctcctcacccacatcctactcaacaccatcttcacctcc
ctcacctccagcgcagggcctgtggtggtgctgctgtgtccaggctgggagaaggttcag
gttgtgtatgacctgctggaggagatggagatcacctcagtccttcaccctttcatcgtg
ctgctgggcatcggcaaaaacgaagccaaggatgtcaggatccccaaaaactgcctgctg
ttagtgaccactcccttcagtttggtccgcctgctgtcctgccactgcttcctgttcctg
cgtctctaccacctcgtgctggatgaggctgaccagctttttactctggctccagatcag
atggcgaccatcctgcagcatttccagaaggtgacgtccagcgaggagaaggcatcctgt
cctcagcagcttgtagccgtggcaaaaagatggaccagtcacatggaggggttattagcc
aatcatatgccatacccctgcattttcttgactgtccctaaggaagctgctctctatggt
gacgttcagcagatcatcctcatgactctggagagcagtaaggcctcagtactgttgggt
gcgttggatttcaaccctgatgtcggccagaagactctgatcgtagctaattctgttcag
gaagctgaagatgtgttcaaggctgtgagcagcaaatcagctttctgcctcaaaacccac
gaacagtcaacatacctgtttgacttcgtcatccagcagtggagaaaagacatcggcccc
ggcactcacgttatcctggtgaccaccaatgagtgtctgaagtgtctgggaatcagagat
gcgacttgcgttgtccactatggcttccccatttcccccaaagtgttcggtagccgactc
ctctgcatggccgagaacttcagaaacctttctacacgagtttccatggaccaggatcag
acagggagtcgtcatctcaccaggtcggtgctgctgatctctgagaggaacgcctgtcat
gtagtcggggttctgcgttacctggagcgaacaaacgctctgttgcctcctgagctgctg
tccttcgctcaaggcatccgtgtggcccgggaggaccagaagaccaacaagcctctctgc
agctacctcaagagctttggagtctgcagagacagcagtgtgtgtcctgaccgtcacaga
ttcatctcccagctggataaatctgagcttcctgcctcgggagtcatagaagtggtgcct
ctctatattaagacagcatcagtgttctacggtcgtatcgtcaggaatgaggatggaggt
ttccagagcatggcgtctgagatgacttcttactatgctgacaagaaacctggagccgag
gagatgctggagggaggcttgtacactgtgcaggaggacgacgtcttccacagggtgaag
atcctatcagtcccagaccgtggtgaccggctgtttttcagcgtcttggttcggttcatt
gatgtgggaaaggaggaggaggtcaaatcccatcagatcctgcagctcccagagcagttt
cactctctgcccggccaggccatcgagatcatcgtctgccgggtcaaacctgtcgacgca
gagatcgactggcaccccaaggtcaccagagcgatcagccagaagatccgcggtctgcag
catcgagccagagcagttttaagtctgggaaacactgtttttgttgatcccatggtccgt
atgactcgggtgccaggtaccaaaactgtgatcaatgaatacagcgtgcagtcagagatc
ataacctctgggatgggagtcagcaacccggagcatctggacctgctgaatgcgctctgc
caggagagcagcaagcagacgagtcacagttctgggtcagaggatggtccggtgtctctg
gaggtcaggatcaaagctgaggaggaagttctgcctaaaaccttcagagcagccgaggta
agtcagctcgatgaccttcctcacctcgagccatgtgagccacttagtccagtatcttca
gtgatccagtccctggtcccagcaccaccaacaccagcagcagttgaactccacctggtt
cctgtgtgtgatcagaacggtctgttggatagccaggcagcttttggacagacaaacacc
cacactgagcagatgatgaggatcgtagatggaggagaactgtcccccatgaccagtcag
cctgctcctctgaacccctgtgaaaacggtgacgatcaaagcaacagcctggaggtcatc
agcactaatgagacagactgtgatgactccataaaaagtttccaccctctgctccgttgg
taccagacgtccgactctgtgactgtaacggtgaagctgatgaacccggagaggcagcgc
tgtgacttctaccctgacagagtcgtctacagtggcagagccaacggtcgcacctacaga
gccgacctgcagcttcacgcccacatcgctgctgaccgctgctgctgggaaatgaagtcc
aacgagccagtgctcaagctggtcaaacaacagcagggccactgggaaagactcctgagg
aacaagaatattttcgtgagctatgacatggagcacttggaggaagatgaaggcagaacc
ccaaatggtctgtgttttgtggagaacacagggaaggattactggtatgtgaactcagag
agcggcagtgagagcgactga
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