Epinephelus lanceolatus (giant grouper): 117262160
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Entry
117262160 CDS
T07331
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117262160 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117262160 (sin3aa)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
117262160 (sin3aa)
REST complex
117262160 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117262160 (sin3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
117262160
NCBI-ProteinID:
XP_033490787
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All DBs
Position
11:32833893..32870083
Genome browser
AA seq
1278 aa
AA seq
DB search
MKRRLEDQETVFASQQRRLSGNAEAFQHRVLAPAPAPAVYEAVSDNMQPTAGVQYSVPQG
YQVSLLSQVPTVAQNSGGHGHTPSPAVHGGSHHHSPAVQSHGPSVMSGHSHTAAPQASAQ
GQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKG
HPDLIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPITGAATQHPPQL
PSAATTTAPPLLTQPTQAKMSKPLQPQALTPSSQSNPSIPAYTSPRSPPMQLHPPLSGTP
TGPPMQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTP
ALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLNKTTAEKAESVRNDHGGTAKKL
QLNNKQRPNQNGCQIRRHPTPGSTPPVKKKPKLLNLKDSSVAEASKHGVGTESLFFEKVR
KALRSAEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKNFLGYREMSHIE
TYPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSW
SEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETVQRKLSRMSAEEQAKF
RLDNTLGGSSEVVHRKAIQRIYGDKAPDIIDGLKKNPAVSVPIVLKRLKTKEEEWREAQR
GFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEENATP
PTGPHLTLAYEDSQILEDAAALIIHHVKRQTSIQKEDKYKIKQIIYHFIPDMLFSQRGEL
SDVEEEEEEEEMDLEEGASKKHNGVPGSGSPSKSKLLFSNTAAQKLRGSDDAYNLFYVNN
NWYIFLRLHQTLCSRLLRLYGQAERQIEEEVRERDWEREVLGLKKEKNDNPAIQLRLKEP
MDIEVEDYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQH
IVSDEICVQVTDLYLSESANGASGGTMSTQSSRSSAEAMYQRKAEQLMSDENCFKVMFLR
NRGQVQLTVELLDTEEENSDEPMEAERWSDYVGRYLNPDSTTPELREHLAQKPVFLPRNL
RRIRKYQKGREQLDKEACEGGKKSLEKEKMECMFKLNSYKMVYVFKSEDYMYRRTALLRA
HQSHERVSTRLHKRFQAWVDAWAKEHVTRDMSADTNKWLMGETRDGLLPCTTSRQPEILH
FMNINKYRVKYGPPSKAP
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgactggaggatcaggaaacggtttttgcgtcccagcagcggcgcctctct
ggcaacgcggaggctttccagcatcgtgtcctggcccctgctccagctccagctgtgtat
gaggccgtgtctgacaacatgcagcccacagcaggcgtccagtactccgtcccccaggga
taccaggtatctctgctttcccaggttcccaccgtggcccaaaacagtggcgggcatggg
cacactccgagcccagctgttcatggcgggtcccaccaccacagcccggcagtccagtcc
catgggccctcagtgatgtcagggcacagccatacagctgcacctcaagcctctgcacag
ggccagcagtttcagaggctcaaggtggaagatgctttgtcttacttggatcaagtgaaa
ctgcagtttggcaaccagcctcaggtctacaatgactttctggacataatgaaagagttc
aagtctcaaagtattgacacccctggggtcatcagcagagtgtcgcagctattcaaaggt
caccctgacctcatcatgggtttcaacaccttcctgccgcctggctacaagatcgaggtc
cagaccaacgacctagtcaacgtgaccacgcctggtcagatccaccacatcaccccgcac
ggcatttcagtccagaacatccccataacaggagcagctacccaacatccgccccagctc
ccgtctgctgcgaccaccaccgccccaccccttctgacgcagcccacccaagctaagatg
agcaagcctcttcagccccaggcgttgacaccaagcagtcagagcaatccgtccatccct
gcctacacctcccctcgctcccctcccatgcagctccacccgccactcagtgggaccccc
actgggccacccatgcagaacaaccagcctgtggagttcaatcacgccatcaactacgtc
aacaagatcaagaaccgcttccagggccagcccgacatctacaaagccttcctggagatt
ctccacacataccagaaggagcagcgtaacgctaaggaggctggtgggaactacacaccg
gccctgacagagcaggaggtgtacgctcaggtggccaggctcttcaagaaccaagaggac
ctgctctcggagtttgggcaatttcttcctgatgccaacagttcagtgctgttaaataag
accacagccgagaaggcagagtccgtacggaacgaccacggcggtacagccaaaaagctg
cagctcaacaacaaacagaggcccaatcagaatggctgccagatccgtcgccatccaact
ccagggtccacacccccagtcaagaagaagcccaagttactgaatctgaaagattcctca
gtggcggaggccagcaagcatggagtcgggacagaatctctgttctttgagaaggtgcgc
aaagccttgcgaagtgcagaggcctatgacaacttcctgcggtgtctggtcatttttaat
caggaggtgatctccagggctgaactagtacagctggtgctgccctttttaggaaaattc
cccgagctgttcaactggtttaagaacttcctgggatatcgggaaatgtctcacatcgaa
acataccccaaggaacgggccaccgagggcattgccatggagattgattatgcttcctgt
aagagactcggctccagttacagagctctgcccaaaagctaccaacagcccaaatgcacc
ggcagaactccactttgtaaagaggtcttaaatgacacctgggtctccttcccctcctgg
tcggaggactccacatttgtcagctccaagaagactcagtatgaggagcacatctacaga
tgtgaggacgaacgctttgagttggatgtagttctggagacaaacctggctaccatcaga
gtcctggagacggtacagaggaagttgtcccgcatgtcagcggaggagcaggccaagttc
cgcttggacaacacgctgggtggctcatcggaggtcgtacaccgcaaggccatccagagg
atatacggagacaaggcgcctgacataatagacggcctgaagaaaaaccccgctgtgtct
gtccccatcgtgttgaagagattaaagaccaaggaggaagagtggcgggaagcccagcga
ggcttcaacaagatctggagggagcagaacgagaagtattacctcaagtctctcgaccat
caaggcatcaacttcaaacagaatgacaccaaagtgcttcgatccaagtccctgctgaat
gaaatcgaaagcatttatgatgagcgccaggagcaggcatctgaggagaacgccacccca
cccacaggcccccacctgaccctggcgtacgaggacagccagatcctggaggacgcagca
gcgctcatcatccaccacgtgaagcgacagaccagcattcagaaggaggacaaatacaag
atcaaacagatcatctaccacttcatccccgacatgctgttctcccagcggggcgagctc
tccgacgtagaggaggaggaagaggaagaggagatggatctggaggaaggcgcctctaaa
aagcacaacggcgtccccggcagcgggagcccctccaagtccaagctgctgttcagcaac
acggcggcacagaagctgcgtggctccgacgacgcctacaacctgttctacgtcaacaac
aactggtacatcttcctgcggctgcaccagacgttgtgctcgcgtctgctgcggctgtac
gggcaggcggagcggcagatcgaagaggaggtcagagaacgagactgggagagggaagtc
ctgggactgaagaaggagaagaatgacaatccagccatccagctgagactgaaggagccc
atggacatcgaagtggaagattactactcagccttcttggagatggtcaggaatttgctg
gacggaaatatggaggcgtctcagtacgaggactccctgagggaaatgttcaccattcac
gcttacatcgccttcacaatggacaagctcatccaaagcatcgttcggcagcttcaacac
atcgtgagtgatgagatctgcgtccaggtgacggacctctacctctcagagagcgctaat
ggagccagtggaggaaccatgtccacccagtcctcgaggagctcagctgaggcaatgtac
cagcggaaagccgagcagctcatgtctgatgagaactgcttcaaggtgatgtttttgagg
aacagagggcaggtgcagctcacggtggagctgctcgacacagaggaggagaactctgac
gagcccatggaggccgagcgttggtctgattatgtcggacgctacttaaacccagattcc
accacacctgagttaagagagcacctcgctcagaagccagtttttctccccaggaatctg
agacggatcaggaagtaccagaagggccgagagcagctggacaaagaggcgtgcgagggc
ggcaagaagtccctggagaaggagaagatggagtgcatgttcaagctcaactcgtacaag
atggtgtacgtcttcaagtctgaggattacatgtaccgacgcactgccctgctgcgagct
caccagtcacacgaacgggtgagcacacggctgcacaaacgcttccaggcttgggtggac
gcgtgggccaaggagcacgtcacccgcgacatgagtgctgacaccaataagtggctgatg
ggcgaaacgcgtgacggcctattaccctgcaccaccagccgccagccggagatccttcac
ttcatgaacatcaacaagtaccgcgtcaaatacggcccgcccagcaaggcgccgtag
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