Epinephelus lanceolatus (giant grouper): 117262175
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Entry
117262175 CDS
T07331
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117262175 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117262175 (cnot2)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117262175 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117262175 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
117262175
NCBI-ProteinID:
XP_033490816
LinkDB
All DBs
Position
11:complement(128442..138525)
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AA seq
530 aa
AA seq
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MFGARKKFVEFVEVVDNDFSDESMYYSQPSMFPHRSEKDSSNVFLQMLSSPSPSSSGQLS
QLGASLYGPQSALGFSVRGMGNSTPQLNRNLTQGTQLPSHITPTTGVPTMSLHTPPSPSR
GTLPMNTRNMLNHSQVGQGIGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQQARQPFTIN
SMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGTGNPTPVL
NPLAGRAPYVGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPTLNNDDSKTNLNSTSKST
SNADGPKFPGDKTASAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAETD
PGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDK
LAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLK
TNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtagagttcgtcgaggtagtcgataacgacttttcc
gatgaaagcatgtactacagccagccgtcgatgttcccacatcggtcggaaaaagattcc
tcaaatgttttcctccagatgctgtcctctccctcgccgtcgtcgtcgggtcagctgtcg
cagcttggtgcaagtttgtacggtccacaaagtgcactcgggttctcggtaaggggcatg
gggaacagtacgcctcagttaaatcgaaatctaacgcaaggcacacagttaccaagtcat
atcacccccacaacaggggtccccaccatgtccctccacacccctccatcaccaagcagg
gggacattgccgatgaacacaaggaacatgctgaaccactctcaggtcggtcaaggcatt
gggatgagcggcaggaccaatagtatgggcagctcagggctgggcagccccaaccgcagc
tcgccaagtatcatctgtatgcccaaacagcagcaagcacgccagcccttcaccataaac
agcatgtcagggtttggtatgaaccgcaatcaggctttcgggatgaacaactcattatca
agcaacatcttcaatggcacagacgggagtgaaaatgtaacgggactggatctctccgac
ttccctgcgttagcagacaggagtcggagagaagggactggaaacccaacaccagtgctc
aacccactagctggacgggctccttatgttggcatggtgacgaagccatcaactgaacag
acacaggatttctccatccataacgaggacttccccgcactgcctggcccaaactataag
gaccccacgttgaacaacgatgacagcaaaactaacttgaactccacaagcaagagcaca
tccaatgcagatgggccgaagttccctggagacaagacggcctcagcacagaacaacaac
cagaagaaagggatccaggtgttgcccgatggtcgggtgacgaacattccctcaggaatg
gtgacagaccaattcggcatgattggcctgttgacgtttatccgggcagcagagactgat
ccggggatggtccatctggcgctaggaagtgacctcacaacactgggactcaacttaaac
tcaccagaaaacttgtaccccaagttcgcctctccttgggcctcatcaccttgtcgacct
caagacattgacttccacgtcccgtctgaatacttaacaaatatccacataagggacaag
ttggctgcaattaaactggcacgatatggtgaggacctgttgttctacctgtactacatg
aatggtggagacctgctacagcttctggcagctgtcgagctctttaaccgggactggagg
taccacaaagaggagcgggtttggataacaagggcacccggcatggagcctacactgaag
accaacacctacgagaggggaacctactacttttttgattgtcttaactggaggaaagta
gccaaggagtttcatctggagtacgacaagctggaagagaggccacacgtgccaacaaca
ttcaactacaacccagcccagcaggccttctaa
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