Epinephelus lanceolatus (giant grouper): 117262321
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Entry
117262321 CDS
T07331
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117262321 (chd2)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117262321 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
117262321
NCBI-ProteinID:
XP_033491106
LinkDB
All DBs
Position
11:complement(23244216..23274850)
Genome browser
AA seq
1818 aa
AA seq
DB search
MMKNKSKKQEDEGSTQSNASSNSASEESNRSASESGSQSESEHGSERRRSHNSESNSSSE
SESHSESESESAESKSQQTAAEVKDKPVRKKERLADVKKMWDEHPDVYGVRRSNRSRQEP
ARLNIGAGGSSDSESESPKRKTPRAKKKENIWKDDDSNDDEEEEEEEEEEASDSADSEQE
EKKVRSRRLPARRPQTKSSTAKKQLSQKARKSRKQDSSGEEDDDDDDDDDDDDDDEEDTP
KRQTRRRGATKVKSYKEDQHDFETDSDDLIEMTGDVGEEQQDDDSETIEKVMDTRTGKKG
VTGASTTVYAVEENGDPGEGFDPENDEGETHYLIKWKGWSYIHNTWESMDSLTQQKVKGL
KKLDNYKKKQDELNSWLRRASPEDVEFHNCQQELVADLNKQFQIVERIISIKTGKTQGSS
DFPSHSHKTPSSNEPEYLCKWMGLPYSECSWEDGALVSKKFQHCIDSFTNRNSSKTVPSK
DCKVLKQRPRFVALKKQPSYIGDENLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKT
IQTISFLSYLFHQHQLYGPFLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKTIRD
YEWVNHSTKRIRFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLMEF
RSNHRLLITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDEHGKGRDNGYQSLHKVLEPF
LLRRVKKDVEKSLPAKVEQILRVDMTAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVM
ELKKCCNHSFLIKQPEDVETETQQEHLQNLVRGSGKLVLLDKLLTRLRERGNRVLIFSQM
VRMLDILAEYLAKNRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINL
ASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLD
HLVIQRMDTTGRTVLDSNSGTTNSNPFNKEELTAILKFGAEELFKEAEGEESEPQEMDID
EILRLAETRESDQGSSATDELLSQFKVANFSSMEESTQDFEDKPRREWDDIIPEDQRRKV
EEEEKQREMEDIFMLPRSRSSNKRAQANDSDSDVGSKLKHRSSGSDSETDDSDDEKKPKK
RGRPRARKNNVEGFTDAEIRRFIKAYKKFGSPLERLEAIARDSELVDKSIADLKRLGELI
HTSCVAAVQEHEEHLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVP
VDPAERNKFKLTCRVKVAHFDVEWDLQDDIQLLLGTYEHGFGNWDLIKTDPDLKLADKIL
PDDPSKKPQAKQLQARAEYLLKLLKKEQDNADLSKTGEEVKVRKRKPRVKKENKILKDEQ
GNDISSPRLSDNPSEEGEVKDDGAEKSPAKKRQKKKDNKENKEKQGTPKKEKDGDKEKKG
TKPRKEKAKGAKGKKTQGPVHITAGSDPIPIEGKEDDELDQETFSICKERMRPVKKALKQ
LDKPDEGLSDQEQLQHTRTCLLKIGDRITECLKAYSDPEHVKIWRRNLWIFVSKFTEFGA
RKLHKLYKMAQKKRSHEEEKEQKKKDDPAGRGKNFRPEPSGSSRDSSSTQSSSKPVPHSS
QPGPHGHHRESYNSANKRHFGNDDRGDWQRDRKYNYPGNSNQSWQGDRHHPYDRYKDHYG
DRRPHGDSYRSSGGYRNNSSPRKRPYEQYSNDRDHRGHRPYYDRHSDPKRRRPDEFRPNY
HQGRDGPLQDFRRMPEHRPSGPPGPEHYNRPFHPDKPPPLLDPRSPQAQKSPQDSRSPPE
RPIDPNIVADPNWNNRKT
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataaaagtaaaaagcaggaggatgaaggatcgactcagagcaatgcatca
agcaattcagcctcagaggaatccaaccgctctgcgtcggagtcgggaagtcagtcagag
agcgagcatggcagtgagaggaggagatcccacaactctgaatccaacagctcctcagag
tcagagagtcactcagagtcagagagcgagtctgccgagtccaaatcacagcaaaccgca
gcagaagtgaaagacaagccagttagaaagaaggagcgtctggcggatgtgaagaagatg
tgggacgaacatccagatgtgtatggagtcaggaggtcgaatcgcagcagacaggagccg
gcccgtttaaacatcggagctgggggcagcagcgactctgagagtgagagtcccaagaga
aaaacaccccgagctaagaaaaaagaaaatatctggaaagatgatgactcaaatgatgat
gaagaggaggaggaggaggaggaggaggaggcttccgacagtgcagacagtgagcaggaa
gagaaaaaagttagatccagacgacttcctgctagaagacctcagaccaaatcatcaaca
gccaaaaagcagctatctcaaaaagccaggaagtccaggaaacaggactcgtctggcgaa
gaagacgacgatgatgacgacgacgacgacgatgatgacgatgatgaggaagacactccc
aagaggcagactcggagacggggtgcgactaaagtcaaaagttacaaagaggaccaacat
gacttcgaaacagactctgatgacctgattgagatgacaggggatgtaggcgaggagcag
caggatgacgacagtgagaccatcgagaaggtcatggacaccaggacaggcaaaaaagga
gttaccggggcttccactactgtgtatgctgtggaggaaaatggggaccctggtgagggc
ttcgaccccgagaacgatgaaggggagactcactatctgatcaagtggaagggctggtcc
tacatccacaacacgtgggagagcatggactctctgacgcagcaaaaagtcaagggactg
aagaaactggacaactacaagaagaaacaagatgagctcaattcatggttgaggagggca
tctcctgaggatgtagagtttcataactgccaacaggagctggtagctgacttgaacaag
cagtttcagatcgtggagcgaatcatctcaataaaaacaggaaagacacaaggatcctct
gacttcccctctcatagtcataagacgccatcctcaaatgagcccgagtatctatgcaag
tggatgggcttaccctattcagagtgcagctgggaagacggagctttggtgagcaagaag
tttcagcactgcatcgacagcttcacgaaccgaaactccagcaaaaccgtcccctccaaa
gactgcaaggtgttaaagcagagaccaaggtttgttgcactgaagaagcagccgtcatat
atcggagatgaaaaccttcagttgagagattatcagctggatgggttgaactggttggct
cactcctggtgcaggtgcaatagcgtcatccttgctgatgagatggggctcggaaagact
atccagaccatctccttcctgtcgtacctctttcaccagcatcagctgtacggacctttc
ttagtagtggtgcctctgtccacgctcacctcctggcagagggagtttgacacctgggcc
ccagacatgaacgtggtggtctacctcggtgacgtcatgagcaggaaaacaatccgtgac
tatgagtgggtgaaccattcaacgaaaagaatccgtttcaatgcactattaaccacttat
gaaattctacttaaagacaagggggtgcttgggaacataaactgggcgtttctgggtgtg
gatgaagctcacaggctgaagaatgacgactccctgctgtacaaaacattgatggagttc
aggtccaaccacaggctcctcattactggcactccgctgcagaactccctcaaagagctc
tggtcgctgctgcacttcctcatgccagacaagtttgattcctgggaggattttgaggat
gagcacgggaaaggaagggataacggttatcagagtcttcacaaagtcctcgagcccttc
ctcctgcgacgtgtcaagaaagatgtggagaaatctctccctgccaaggtggaacagatc
ctccgtgtagacatgactgcacagcagaaacaattctacaagtggattttaacgaggaat
tacaaagctctttccaaaggcacccgaggcagctcctccggcttcctgaacatcgttatg
gagctcaaaaagtgctgcaaccacagtttcctcattaaacagcctgaggacgtggagact
gaaacacaacaggaacacctgcagaatctagtgaggggcagcgggaagctggtgctgctg
gacaagctgctgacccgactcagggaaagaggcaatcgagtcctgatcttctcccagatg
gtcaggatgttggatattctggctgaatacctcgccaagaatcgctaccctttccagcgg
ctggacggatccataaagggagaaatccgaaagcaagcacttgaccactttaatgcagaa
ggctcagaggacttctgcttcctgttatccacccgagctggaggtttagggataaatttg
gcctcagcagacaccgtagtcatcttcgactctgactggaatcctcaaaatgacctgcag
gcacaagccagagctcacaggatcggccagaagaaacaggtgaatatttatcggcttgtt
accaaagggacggttgaggaggacatcattgagagggcaaagaagaagatggttttggac
catcttgtcattcagagaatggacaccaccggtcgtaccgtgctggacagcaactcggga
accacaaattcaaaccccttcaataaagaagaactgactgcaatcctcaagtttggagca
gaggagctttttaaagaggcagaaggagaggagtctgaaccacaggagatggatattgat
gagatcctgcggttggctgagacaagagaaagcgaccagggctcaagtgctacagatgaa
cttctctctcagttcaaggtggccaatttctccagcatggaggagagcactcaagatttt
gaggacaagccccggcgggaatgggatgatatcatccctgaagatcagcggcgcaaagtt
gaggaggaggagaagcagcgggagatggaggacatcttcatgctgcccagaagcaggagc
tcgaacaagagggctcaggctaatgatagtgacagtgatgtgggctccaagctgaagcac
cgctcctcaggctctgacagtgagactgatgatagtgatgacgagaagaagccaaagaag
agaggccgacccagagcccgcaaaaacaacgtggagggtttcactgatgcagagatccgc
aggttcatcaaggcatacaagaaatttggatctccactagagaggttggaggccatcgcc
cgagactcggagctggtcgacaaatccatagcagacctgaaaagacttggtgaactgatt
cacacaagttgtgtggctgcagtgcaggagcatgaggaacaccttaaagagaacccagtt
gaagccaaaggtcctgggaaacggcgaggaattaacatcaagatctcgggagtgcaggtc
aacgccaagtccatcatccagcacgaggaggagtttgagcccctgcacaaagcagtgcct
gtcgatcctgctgagagaaataagttcaagctgacatgcagagtcaaggtagctcatttt
gatgtagagtgggatctgcaggatgacattcagctgttgcttggcacctatgagcacggc
tttggaaactgggatctgatcaagacggaccctgaccttaaactcgctgataagattctc
ccagatgatccgagcaagaagcctcaggccaagcagttgcaggcgagagcagagtatctt
ctcaagctgctgaaaaaagagcaagacaatgcagacctgtctaaaacaggggaggaggtc
aaagtgaggaagaggaagcctcgggtgaaaaaggagaacaagattctcaaggacgagcag
ggcaatgacatctcctccccccgcctgtccgacaacccgtcagaggagggcgaggtcaag
gatgatggagcagagaagtcccccgccaagaaaagacaaaagaaaaaggataacaaagag
aacaaagagaaacagggaactcctaaaaaagagaaggacggggacaaagagaaaaagggt
accaagcccagaaaagaaaaggctaaaggagccaaagggaagaagactcagggtccagtt
cacatcacggctgggtctgaccccattcccatcgaaggaaaggaggatgatgaactcgac
caggagactttcagtatttgtaaggaacgcatgaggccagtgaaaaaggctctgaagcag
ctggataaaccagacgagggtctgtccgaccaggagcagctccagcacactcgcacatgc
ctactgaagattggagaccgaatcacagagtgccttaaagcctacagtgaccccgaacat
gttaaaatatggcggagaaacctctggatatttgtgtccaagtttacagagtttggtgcc
aggaagcttcacaagctttacaaaatggcacagaagaagcgatcacacgaggaagagaag
gagcagaagaagaaggacgaccctgcagggagggggaaaaacttcagaccggagccctct
ggatccagtcgagactcctcgagtactcagtcgtcctccaaacctgtccctcactcgtct
cagccaggcccccatggacaccacagagagtcgtacaactcggctaacaagcggcacttt
ggaaatgatgatagaggcgactggcagagggatcgtaaatacaactacccaggtaacagc
aaccagtcatggcagggagaccgacatcatccatatgatcgctacaaggatcactatggc
gatcggcgtccacacggagactcgtaccgcagctcaggaggttaccgcaacaacagctcc
cctcggaaaaggccgtatgagcagtacagcaacgaccgggaccacaggggtcacagaccc
tattatgacaggcattcagaccccaaaagaagacgtcctgatgaattccgtcccaactac
caccagggaagagatggccctcttcaggacttcaggaggatgccagagcacaggccgtca
ggtccacctgggccggagcactataacagacccttccaccctgacaaacctcctccgctg
ctggaccctcgctccccgcaggctcagaagtctccccaggactcgcgctccccaccggag
cggcccatagatccaaatatcgtggcagaccctaactggaacaacaggaaaacataa
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integrated database retrieval system
