Epinephelus lanceolatus (giant grouper): 117262372
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Entry
117262372 CDS
T07331
Name
(RefSeq) transcription intermediary factor 1-alpha-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ely01001
]
117262372
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117262372
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117262372
Protein kinases [BR:
ely01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
117262372
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117262372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
Bromodomain
zf-RING_UBOX
zf-RING_5
PML_CC
zf-C3HC4_2
zf-C3HC4
PRANC
PHD-1st_NSD
FTCD_C
Motif
Other DBs
NCBI-GeneID:
117262372
NCBI-ProteinID:
XP_033491184
LinkDB
All DBs
Position
11:35759378..35778638
Genome browser
AA seq
1002 aa
AA seq
DB search
PHLCGYPTSRKHREKQPRRIKVEQMDGRTEKQEPGDGAAAAAAAASAAAAAAIVVGNEAE
SKQVQEEKSGVTGRNYLDTCPVCHLNFHSREPKLLPCLHSFCKKCLPSPSRNLAMAEPPN
SQVESASKPLNVIRCPVCRQECMEVDVMENAFVKDSVEAPSSTVERTVQLCMTCDDNTEA
AGFCVDCVEYLCVTCVEAHQRVKFTKDHTIRQKAEVSQEVHGVSAQRPMFCDIHKQELLK
LFCETCDLLTCRDCQLVKHKDHNYQFLEDAYRNHKQHMESMTHQLQEKQKLIEEVSNSIN
SGLVQVDQNRTSVHNEIKKSICSLILEINKKGKMLVNQLEAVTKDHETVLRKQQEDIGYL
SRHLDHVINFTKWATARNGGTALLYCKRLILFQIGNLLRVKCSTSFIPQSTVRFQSRSSY
WASNVDLGSLVVESVPGHQLGGFQGIPHQLSHPGQGPSGSPHSFALGAPHSTLAQLQMQV
DKLNPQANWQPQPPPPPWTWYQSVRLQRTIPGPLQGGSPSHTVLPQPGRRFMVPPANHVS
PTSSQPSPGFTPQPLRGMGSSSSYQPKPVDVFSSSPLYTQITPLPINGGVSSPQSRQTIE
PTYLTRRSDSGGPIYILKPNYPQSLPPSLLHRNVQGQQNSLGYTAVSQEEKPGTVTWKPP
ETHQASGAVGSAVKKRRRSSPGPIIVIKDEPDDDGSYVQANQRASLPDSTGDQPQISAHG
EGNKVSTPLQSTNDKPHSPSQPPSSPQDQSKTNAANGIRSLGGEQQVEQHRAPLEDSNEA
LCAVCRTGGELLCCDKCPKVFHLSCHVPTLLKSLSGEWFCSFCRDLLVPEMEYDCESKPE
AKTVKKEPGSEGGFPPVDKRKCERLLLHLFCNELSSDFQGPASPSVCANNMLTVKGPVNL
SAVKKRLEAKQSVCYQSPAEFVSDIRLVLGSHAVLSEADTEAAMAGRKLKELFEEHLRIT
FPDQTFPEIKLEMIPTTLSDSLLSPLDNISRPAKRQRTCSDS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
cctcacctgtgtggatatcctacatctcgtaaacacagagagaaacagcctcggaggata
aaagtggagcaaatggacggacgcacagagaagcaggagccgggggatggtgctgctgct
gctgctgctgctgcttccgccgctgccgctgctgccatcgtcgttgggaacgaagcggag
agcaagcaagtgcaggaggaaaagtccggtgtgaccggtcggaattacctggacacctgc
cccgtttgccacctgaactttcacagccgagagcccaaacttctgccgtgtctgcactct
ttctgcaagaaatgcttgccttcaccatccaggaatctggccatggcagagccgccaaac
tcccaggttgagagcgcgagcaaaccactgaatgtgatccgctgtccggtgtgcaggcag
gagtgcatggaggtagatgtgatggagaatgcctttgtgaaggactcagttgaagctccc
agcagcacagtggagaggacggtgcagctctgtatgacctgtgatgacaacactgaagct
gctggcttttgtgtggactgtgtcgagtacctctgtgtcacctgtgtggaggcccaccaa
agagtcaaatttaccaaagaccacaccatcagacagaaggccgaagtatcacaagaggtc
catggtgtgtcggctcagaggccgatgttctgtgacatccacaaacaagagctgctgaag
ctgttctgtgagacctgtgacctgctaacctgccgcgactgccagctagtgaagcacaag
gaccacaactaccagttccttgaagatgcttatagaaaccacaaacagcacatggagagc
atgacccatcagctgcaggagaaacagaaactgatcgaagaggtgtctaactccataaac
agtggacttgttcaggttgatcagaaccgcacgtctgttcataatgaaataaagaaatcc
atctgcagtttgatcctggagataaacaagaagggcaagatgctagttaatcaactagag
gctgtaacaaaggatcacgagactgtcctgcgaaaacaacaggaggacatcggctatcta
tccagacacctggatcatgtcatcaacttcaccaaatgggccacagccaggaatgggggc
acggccctcttgtactgtaaacgtttgattctgtttcagattggaaacctcctgagggta
aaatgtagtacctcgttcataccacagagcactgtacgcttccagagtcgatcctcttac
tgggcctcaaatgttgatctgggctctttagtggtggagagtgtaccaggccaccagctg
ggcggttttcagggtatccctcatcagctctcccaccctgggcagggcccctcaggctca
ccccacagctttgccctgggagcaccccatagtactctggctcagctccagatgcaggtg
gacaagctcaacccgcaggccaactggcagcctcaaccacctcctccaccctggacgtgg
taccagagcgtccggctacagcgaaccattccagggcctctgcaaggaggctctccctcc
cacactgtgcttccccaaccaggccgcaggtttatggtgcctcctgccaaccacgtcagc
ccaactagcagccaaccgagccctgggtttacgccccagcctctgagggggatgggaagc
agctccagctaccaacccaaacctgtggatgtgttttcctcctcacctctgtacacccag
ataacaccactgcccatcaatggcggcgtcagttcacctcaatcacgacagacgattgaa
cctacgtatctgactaggaggagtgactcaggtggtcccatctatatactgaaacctaac
tatccccagagcctgccaccttctttgctacacagaaatgtgcaaggacagcagaactca
ctagggtacactgctgtatcccaggaggagaaaccagggaccgtgacatggaaacctcca
gaaacacaccaggcgagcggagcagtgggctcagctgtgaaaaaaagacgaagatcgtca
ccagggcccatcattgtcatcaaagacgagccagatgatgacggcagctatgtacaagcc
aaccaaagagccagcctccccgacagcacaggtgaccaaccccaaatcagtgcccatggt
gaggggaacaaagtctctacccctcttcaaagcacaaacgacaaaccccatagcccctca
cagcctccgagcagcccacaggaccagagtaagactaatgctgcaaatggcatccgttca
ctgggaggagaacagcaggtagagcagcaccgagctccgctggaagactctaatgaagcc
ttgtgtgctgtgtgtcgaaccgggggagagctgctgtgctgcgataagtgtcccaaggtt
tttcacctttcgtgccatgttcccactctcctcaaatctctcagtggggaatggttttgc
tctttctgccgtgacctgttagtgcctgagatggagtacgactgtgaaagcaaacctgaa
gccaaaacagtgaagaaggagccaggatctgaaggaggatttccccctgtggacaaacga
aagtgtgagaggctgttgctgcacttgttttgcaacgagctgagttcagactttcaaggg
cctgcatccccctcggtatgtgcaaataacatgctgactgtgaagggaccggtgaatctt
tccgctgtgaagaaacgactggaggcgaagcagagtgtgtgctatcagagccctgcagag
tttgtatcagacatcaggctcgtcttgggaagccatgcagtcctcagtgaggctgacaca
gaggccgccatggcaggcaggaagctcaaagagctgtttgaggagcacctgaggatcacc
ttccctgaccagacctttccagaaatcaaactggagatgatacctacaaccctgtctgac
tctctcctctcacctcttgacaatatttcccggcctgcaaagcgtcagcgcacatgttca
gactcctag
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