Epinephelus lanceolatus (giant grouper): 117262394
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Entry
117262394 CDS
T07331
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117262394 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ely03029
]
117262394 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ely02000
]
117262394 (samm50)
Mitochondrial biogenesis [BR:
ely03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
117262394 (samm50)
Transporters [BR:
ely02000
]
Other transporters
Pores ion channels [TC:
1
]
117262394 (samm50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
117262394
NCBI-ProteinID:
XP_033491226
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All DBs
Position
11:31884658..31895109
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AA seq
472 aa
AA seq
DB search
MGTVHARSLDPLPMRGPELGVHPDDIEAPDIDQEPKQEVLENKDVVVQRVHIDGLGRTKE
DLLTYEIAEVFRAKNLIDVMRKSHEARQKLLRLGIFRKVEVVIDTSRGEDALPNGLDVTF
EVTELRRMTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKMTFQFSYGTKETSYGLSFFKPQ
PGNFERNISLNMYKVTGQFPWSSLRETDRGISAELSFPLWKTSQTLKWEGVWRELGCLAR
TASFAVREESGHSLKSSLSHSMVIDTRNSSILPRKGGLLKIHQELAGYTGGDASFLKEDF
EIQLNKTLFWDSVLSASLWGGLLLPIGDKPTSIADRFYLGGPTSIRGFSMYSMGPQSEDM
AGDYLGGEGYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPQAHLKK
LAECIRWSYGLGIVLRLGNIARLELNYCIPMGVQSGDRICDGIQFGAGIRFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtccacgcccggagcctggaccctctgcccatgcgagggccagagctagga
gttcatcctgacgacatcgaggcaccagatattgatcaggagccgaagcaagaagttctt
gaaaacaaggatgttgtagttcaacgagtgcacatagatgggctcggaagaacgaaggag
gacctgttgacttatgaaatcgcagaagttttccgggcaaagaacttgattgatgtgatg
cgaaagtcccatgaagcccgtcagaagctgctgcgtcttggtatcttcagaaaagttgaa
gttgttattgacacctcacgaggtgaggatgctcttcccaacggcctagatgtgactttt
gaagtcacagagctgagacggatgacgggcagctacaacaccatggttggaaacaatgaa
ggaagcatggtacttggcctgaaattacccaatttacttggtcgggcagagaaaatgacc
ttccagttctcctacggcaccaaagaaacatcctacggcctgtccttctttaaaccccaa
ccaggaaactttgaacgcaatatctcactcaacatgtacaaagtaacaggtcagtttcca
tggagctcactgagggagacagatcgaggcatctccgcagaactgagcttccctctatgg
aagaccagtcaaaccctgaagtgggagggagtgtggagagagctgggctgtctggctcgc
actgcctcatttgccgtccgagaggagagtggccattccctcaagtcgtctctttcgcat
tcaatggtcatcgacaccagaaactcctccatccttcccaggaaaggtggactgttgaag
atccatcaggaacttgctggttacactgggggagacgccagtttcttgaaggaggacttt
gagatccagctcaacaaaacactcttctgggactcggtcctttctgcctcattgtggggc
ggtttgctcctacccattggtgacaagccaacaagcatagcagacaggttctatctaggt
ggccccaccagtatcaggggattcagtatgtacagtatgggcccacagagtgaagatatg
gcaggcgactacctgggaggagagggctactgggctggaggcctccacctctacacccct
ctacccttcagaccaggcagggggggctttggtgacctcttcagaacacacttcttcctc
aatgccggaaacctttgcaacctcaactatggtgagggtccacaagcacatttgaagaag
ctggcagaatgcatccgttggtcttatggactgggcattgtgctgcgtttggggaacatt
gccagactggagctgaattactgcattcccatgggagtccagagtggagacaggatatgt
gacggcatccagtttggagcaggaatcagattcctgtaa
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