Epinephelus lanceolatus (giant grouper): 117262408
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Entry
117262408 CDS
T07331
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04514
Cell adhesion molecule (CAM) interaction
ely04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117262408
04517 IgSF CAM signaling
117262408
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117262408
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ely00537
]
117262408
Cell adhesion molecules [BR:
ely04515
]
Immunoglobulin superfamily
Contactins
117262408
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ely00537
]
Others
117262408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
FN3_DSCAM-DSCAML_C
Ig_4
Pur_ac_phosph_N
C2-set_2
Sp38
Ig_PDGFR_d4
DP-EP
Motif
Other DBs
NCBI-GeneID:
117262408
NCBI-ProteinID:
XP_033491245
LinkDB
All DBs
Position
11:29997671..30084696
Genome browser
AA seq
1019 aa
AA seq
DB search
MLHLTLLLHLLVFSLTPAGASVYGEAPDFYGDEATGYGPVFEEQPVDTIYPEESPEAKIT
MSCRARANPPATYKWKLDDNDIDLNAQGSHYSLVGGNLIISNPIKTKHVGQYVCLATNMY
GTVISREASVQFGYLDLFSSEERESVYVKEGQGAVLLCAPPPHYPAELSFRWILNEFPTF
IPLDKRRFVSQITGNLYISKVESSDSGNYSCIASSPSISKSVFSNYIPLVPLAERPIRKY
PADLKVKFPDTIALVGQNITLECFALGNPVPEIRWKKLDGQLPPNHEVRMAGAHLHLYNV
QFEDAGSYQCEAVNSRGKDYHAARVSVEAFPEWVEHIISTEKDLSSAYTMSCIASGKPKP
HIRWLKNGELTDRKEMKFSSLTFDDSGMYQCIAENHHGIIYANAELRVYACAPTFENNPV
KRVMAPRNGRVVIECRPKAAPKPSFSWSKDTELLHNSTRVFIWEDGSLEILNVTRADEGR
YTCFAENDRGKANSTGALLVTESTKITLAPSNADVKVGENSGMQCAASHDPSLDITFIWS
LDGRVIDLHKESQHYERTLNGSSNGELLIKNVQLKHSGRYTCTAQTTIDNVTASAHLVVR
GPPGAPGGVRVVNKTDKTVTLQWSRGADNHNPISKYTIQYRDSFSGEVWKNATTSPADVE
GNAEVATVVDLFPWVEYEFRVIASSTLGTGEPSSPSPKEKTLEASPVVAPSDVGGGGGLS
RELTITWTPVQPQYYYGQNFGYIVAFKRQEGYEWSRVTVPDPQAKRYVHKDPSILPSTEF
HVKVKAFNSIGEGPFSLTATIYSAQDAPSEAPVSVDGRALSATEATVSWLPLAQRNIDGY
QVKYWRNQEDSEGGAQRVVVPGRENHTRLEGMKPNSHYIIEIRGYNSAGYGPPSDHLHIH
TKKAPPSQPPKIIGKKLKGHVINIAWEHVEPLANEASIDGYRVLYRQQGHSTGTLYTTSR
RYIDLPMPTDGNYVVEVRAHTEGGDGAVAKIDITGGGVVSAPSLGVLSLLLVALLCLNL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacctcaccctgctcctccatctcctggtcttctctctcacccctgcaggtgca
tcagtgtatggggaggcacccgacttctatggagacgaagccacaggttatggaccagtg
tttgaggagcagccggtggataccatctaccccgaggagtcgcccgaggcaaaaatcacc
atgagctgccgggcccgggccaatccacctgccacatacaagtggaagctggacgacaac
gacattgacttgaacgcacaaggcagccattacagtttagtaggaggcaacttgatcatc
agtaaccccattaaaaccaaacatgtaggacagtacgtttgtttggcgaccaacatgtat
ggcacggtcatcagccgagaggcctcagtccagtttggatacctcgacctgttctcgtca
gaggagagggagtcggtgtacgtcaaagagggacagggggcagtgctgctctgcgccccc
ccaccacattatccagctgagctgtcattccgatggatcctcaacgaattccccaccttc
atcccgctggacaagaggcgttttgtctcacagataacgggtaacctctatatctctaaa
gtggagtcctcagacagcggcaactactcctgcattgcgtccagcccatccatttccaag
agtgttttctccaactacatccccctcgtacctctggctgaacgtcccatcagaaaatac
cctgctgacctcaaagtgaagtttccagacaccattgctctggtggggcagaacatcacc
ttggaatgcttcgctttggggaaccccgtccccgagatccgctggaagaaattagatgga
cagctgccacccaatcacgaggtgcggatggcgggagctcatctgcacctgtacaacgta
caatttgaagacgctggcagctatcagtgtgaggcagtgaactcgagaggaaaagactat
catgctgcacgtgtgtctgtcgaagccttccctgagtgggtggagcacatcatcagcaca
gagaaagacctcagcagtgcttacaccatgtcctgcatagccagcggcaaacctaaacca
cacatccgctggctgaaaaatggagaactgactgacaggaaagagatgaagttcagcagc
ttgacgtttgacgattcagggatgtaccagtgcatagcagagaatcaccacggaatcata
tatgccaacgcagagctgcgtgtgtacgcctgtgctcccacgtttgaaaacaacccagtg
aagagagtcatggcacctagaaacggccgagtggtgattgaatgtcgtcccaaggcggct
ccaaagcccagcttctcctggagcaaagacacagagctgctccacaactctaccagggtg
ttcatctgggaggatgggagcctggagatcctcaacgtgacgcgagcagatgaaggcaga
tacacttgcttcgccgagaacgaccggggcaaagccaacagcacgggtgctctgttggtt
acagagtccacaaagatcaccttggcaccgtccaatgctgacgttaaagtgggtgagaac
agcggtatgcagtgcgctgcgtcacatgacccctctctggacatcacctttatctggtcc
ctggacggccgggtcattgacctacacaaggagagccaacattatgaacgcaccctgaat
ggaagctcaaacggcgagctgctcattaagaacgtccagctgaagcattctggacgctac
acctgcactgcacagaccactattgacaatgtcaccgcctctgcccacctggttgtcaga
ggtccccccggtgccccaggtggggtgcgagtggtgaacaaaactgacaagaccgtgacg
ttgcagtggagccgcggagcagacaaccacaaccccatctccaaatataccatccagtac
agggactccttctcaggggaagtctggaagaatgccaccacatctcctgcagacgtagag
gggaatgcagaggtggccacagtggtggatctgttcccctgggtagaatatgagttcagg
gttattgcatccagcactctggggacaggagagccaagcagcccgtcccctaaagaaaaa
accctggaagcaagtcctgtggtggcgccctcggatgttggcggcggtggagggttgagc
agagaactgaccatcacatggacgccagtacaacctcagtactactacgggcaaaatttt
ggctacatcgtggccttcaaacgacaagaaggatacgagtggagcagggtgactgtacct
gaccctcaggccaagcgctatgtccacaaagacccctccatccttccatcgacagagttt
cacgtcaaagtcaaagcgttcaacagcatcggagagggacctttcagcctaacagccacc
atttattcagcgcaggatgctccatctgaagctcctgtaagtgttgacggcagagctctg
tctgccacagaagccactgtgtcgtggctgccgctggcacagagaaatatagatggatac
caggtgaagtactggaggaatcaagaagacagcgagggaggggcccagagggtggtggtt
cctggcagggagaaccacaccaggctggagggtatgaagcccaactcccactacattata
gagatccggggctacaactctgcaggatatgggccgcccagcgatcacctccacatccac
accaagaaagcccctccaagtcaacctcccaaaattattggtaaaaagttaaagggccat
gtaataaatattgcctgggaacatgtggaaccactcgctaatgaggcgtcgatagatggt
tacagagtgctgtacaggcagcagggccactccacaggcactctgtacacaaccagtagg
cggtacatagacctccccatgcccacagatgggaactatgtggtggaggtgcgggcgcac
acagaggggggagacggggctgtggcaaaaatcgacatcacaggtggaggtgtggtgtcc
gccccgtctctcggtgtactctccctgctcctggtggctctcctctgcctgaacctctga
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