Epinephelus lanceolatus (giant grouper): 117262428
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Entry
117262428 CDS
T07331
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04510
Focal adhesion
ely04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117262428 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117262428 (lamb1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
117262428
NCBI-ProteinID:
XP_033491281
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Position
11:36781104..36829414
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AA seq
1799 aa
AA seq
DB search
MLGLQLTVLLALQVFTCAQEGGTSAGGAPDDVSLPEFSDMCTEGSCYPATGDLLIGRAHQ
LSSTSTCGLNRPEPFCIVSHLQEEKKCFVCDSSTPYDELSEQMSGHRIENVVTTFAPNRL
KTWWQSENGMENVTIQLNLEAEFHFTHLIMTFRTFRPAAMVIERSADFGKTWQVYRYFAY
DCESSFPSVSQGPMKKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNML
KITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPIQGAGQ
TSEGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDM
AVFRASGNVSGGVCDDCQHHTTGNNCEQCEPFYYQHPERGIRDPNICQPCDCDPVGSLNG
GICDGMTDVQAGLIAGQCRCKVNVEGERCERCKQAYYGLSDNPEGCKACTCSPVGTVPGG
NPCDSETGSCFCKRLVTGRDCDQCVPEHWGLSNDMDGCRPCDCDMGGAINNQCDQVTGQC
ICRDHMFGRRCDQVESGFYFIALDHYTYEAEDAKFGPGVTMVPRPHPLDRSPTWTGIGLV
NVPEGAFLEFTVDNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPGPITADSRCVNTVPD
DDNQMISLHPGSRYVALPRPVCFETGLNYTIRLSLPRYSALSDVQSPYTLIDSIVLMPHC
KNMDIFTASEGGDSNGNSGWETFQRYRCLENSQSVIKSPMTDICRNYIFSISAMLHQGAK
ECQCDPQGSLSTVCDPNGGQCQCRPNVVGRNCDRCAPATYQFGPNGCKACACDLQGSQSS
FCNQLTGQCVCVSGAYSRQCDRCLPGHWGFPTCRPCSCNGHTDECDPNTGRCISCRDHTT
GHTCDRCLDGYYGDPTLGSGDHCRPCMCPDGPGSLRQFAGSCYRGDDSQQAICVCNTGYK
GARCDECSPGYYGNPGEPGGQCQPCQCNNNIDMLDPDSCDARTGECLRCLYHSEGASCQL
CKLGYYGNALQQDCRKCVCNKLGSENSSCPSSGDCHCDRSSGQCQCLPNVIGQHCDRCAP
DTWNMASGHGCQTCDCNPKHSYGTSCNEISGHCSCQPGFGGRTCSECKELFWGDPEVKCH
ACDCDPQGISEQQCNKANGHCVCVEGVSGPRCDTCARGFSGTFPDCQRCHQCFAEWDEVI
GQLTNQTHRLVNKVNAIKANGVSGPYRKSIDSMEKSVANIRIILNQNPASQPLSEIQELL
QQASDLMGALSQMLNRTEETLSQVEDEDAAAGTKLDSLMSDTQKLERTVQELLDQVEFIK
NSDIRGATNSVTKYFLQSKAAEARANASTVDPYSPVENSSTLRQLTEDKMNQTREEFQRR
HTEYAQRLDDLAGELQTLDLSEISHKTCGSPSSGQDSCLSSPCGGLGCVDSEGRTKCGGE
GCDGVVTTAHNAWKKAQDSEQEIISAMEEVEKLSKMVSEAKLKADEAKLSAQDVLMKTNR
TKQKVQQSNEELRSLIKQIRDFLTQDAADLESVELVANEVLAMQMPTTPAQLQNLTDEIR
QKVGELGNVETILQQSADYIQRAENLLEQARRTSEEASNVKDSAEKVKQALEEAKRAQTA
ASSAIQQATADIRNTNNLLSSVTSETADAELKLANATQRLQSLEQDVTLLRDKGVNITVS
TKRTNEDAATIRKIAEDVKKDLDSELKNKYSTVEELIGTKAGGLADAKKRAESLQQEAKD
LLLKASNKLQLLKDLEKSYEDNQRTLEVKAEQLVELEAAVKELLQEISHKVTIYSTCVF
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcttcagctcacggtgctgctggctctgcaggtgtttacctgcgctcaggag
ggcgggacctcggcaggaggggccccggatgatgtcagcctcccggagttcagtgatatg
tgcacagagggcagttgttacccagcaacaggagacctcctgattggccgagcccaccaa
ctgtcatccacctccacctgtggactgaaccgacccgaaccgttctgcatcgtcagccat
ctgcaggaggagaagaagtgttttgtgtgtgactcttcaacgccgtatgatgagctgagc
gaacagatgagcggccatcgcattgagaacgtcgtcaccacattcgctccaaacagatta
aagacctggtggcagtctgagaatggtatggagaacgtcaccattcagctgaatctggaa
gccgagtttcacttcacacatctcatcatgaccttcagaacgtttcgacctgctgccatg
gtgatcgagcggtcagctgacttcgggaagacgtggcaggtttatcgttactttgcctac
gactgtgagtcctcgttcccgtctgtttcccagggtccgatgaagaaggtcgatgatgtc
atctgtgactcacgttattctgacatcgagccgtccactgaaggagaggtgattttcaga
gttctggacccagcgttcaggatcgatgatccctacagccccagaatccagaacatgttg
aagatcaccaacctgcgggtaaagttcactaaactgcacacgctcggagacaacctgctg
gactctcggatggagatcaaagagaagtattactacgccatctacgacatggtggtccga
gggaactgcttctgctacggacacgcctctgagtgtgccccgattcagggtgcaggccag
accagtgagggcatggttcacggtcactgcatgtgtaaccacaacactaaaggtctgaac
tgcgaacagtgtcaggatttctaccacgacctgccgtggagaccagccgagggacgcaac
accaacgcctgcaaaaagtgtaactgtaaccagcactcagactcgtgtcacttcgacatg
gccgtgttcagggcgtcaggaaacgtcagtggaggagtctgtgacgactgtcagcaccac
acaaccggaaacaactgtgagcagtgtgaaccgttctactaccaacatccagagagaggc
atcagagaccccaacatctgccagccctgtgactgtgaccctgtgggctctctgaatgga
ggaatatgtgacgggatgaccgacgttcaagccggtctgatcgctggtcagtgtcgctgt
aaagtcaacgtggagggagaacgctgcgagcgctgcaaacaggcgtattatgggctgagc
gacaaccctgagggctgcaaggcatgtacctgcagccctgtggggacagttcctggagga
aatccctgcgacagtgaaacaggaagttgcttctgtaaacgtctggtgacaggacgagac
tgtgatcagtgtgtgcctgaacactggggtctcagtaatgatatggacggctgcagacca
tgtgactgtgacatgggaggagccatcaacaatcagtgtgatcaggtgactggtcagtgc
atctgcagagatcacatgttcggtcgacgctgtgatcaggtcgagtctggattctacttc
atcgctctggatcactacacgtacgaggccgaggacgccaagtttggacctggagtgacg
atggtcccaaggccccaccctctggaccgcagtccgacctggactggtattggtctggtc
aatgtcccagagggggccttcctggagttcactgtggacaacatcccccactccatggag
tacgacatcctcatccgctatgaacctcagctgcctgaccaatgggaggaagttctgatg
acagtgatgagacctggaccaatcacagcagacagccgctgtgtcaacactgtgcccgac
gacgacaaccagatgatctccctccatccaggctcacgatatgtggctcttcccagacca
gtttgttttgaaactggtctgaactacacaatccgcctcagtctgccacggtactcagcc
ctcagtgacgtccagtctccgtatacgctcattgactcgatcgtgttgatgcctcactgt
aagaacatggacatcttcacagcctcagaaggaggagactccaatggaaacagtggttgg
gaaacctttcagcgttatcgttgtcttgagaacagccagagcgtcatcaagtcgccgatg
actgacatctgcaggaactacatttttagcatctctgccatgttgcaccagggagctaaa
gaatgccagtgtgaccctcagggctccctcagcactgtgtgtgatcccaatgggggtcag
tgtcagtgtcgccccaatgttgtcggcaggaactgtgacagatgtgcaccggccacatac
cagtttggacccaacggctgcaaagcgtgtgcatgtgaccttcagggttcacagagttca
ttctgcaatcagctgactggtcagtgtgtttgtgtttcgggagcgtacagccggcagtgt
gatcgctgtctgcccggtcactggggcttccccacctgccgaccctgctcctgcaacgga
cacactgacgagtgcgaccccaacactggacgctgcatcagctgcagggaccacaccact
ggacacacctgtgacaggtgtctggatggttactatggtgacccaacgctggggtcaggt
gaccactgtcgtccttgcatgtgtcctgatggccccggcagcctgcggcagttcgcagga
agttgttaccgtggtgacgactcccaacaggctatctgtgtctgcaacactggatacaag
ggtgctcgctgtgatgagtgctcacctggttactatggaaaccccggagagccaggaggg
cagtgtcagccctgtcagtgcaacaacaacatcgacatgttggacccggactcctgcgat
gccagaaccggcgagtgtctgcgctgcctttaccacagcgagggcgcctcctgccagctc
tgcaagctgggttactacggcaacgcattgcagcaggactgtaggaaatgtgtttgtaac
aagctgggcagcgaaaactctagctgtccgtcatccggcgactgtcactgcgaccgcagc
agcggtcagtgtcagtgcctgcccaacgtgattggtcaacactgcgaccgctgcgcaccc
gacacctggaacatggcgagcggccacggctgtcagacctgcgactgcaaccccaagcac
tcttacgggacgtcctgcaacgagatcagcggtcattgttcctgtcagccgggcttcgga
ggaaggacatgcagcgagtgtaaagagctgttctggggagacccagaggtcaaatgtcac
gcatgcgactgcgaccctcaagggatctcagagcagcagtgtaacaaagccaacggtcac
tgcgtctgtgtggaaggcgtttctgggccacgctgcgacacctgtgcccgtgggttctcc
ggtaccttccctgactgccaacgctgccaccagtgcttcgctgagtgggatgaggtcatt
ggtcagctgaccaatcagacacaccgccttgtcaacaaggtcaacgccatcaaagccaat
ggagtcagtggaccgtacaggaaatctattgacagcatggaaaagagcgtcgccaacatc
agaatcatcctgaaccagaacccagcttcacagccgctgtcggagatccaggagctgctg
cagcaggccagtgacctgatgggggctctaagccagatgttgaaccgcaccgaagagacg
ctgagccaggtggaggacgaggacgcggctgcaggaaccaaactggactctttgatgtcg
gacactcagaaactggagaggacggtccaggagctgttggatcaggtcgagttcatcaag
aattctgacatcagaggggcgaccaacagtgtcactaagtacttcctgcagtctaaggcg
gctgaagctcgagcaaacgcctccaccgtcgacccctacagccccgtagaaaactccagc
accctacggcaactcacagaggacaaaatgaaccaaaccagagaggagttccagaggagg
cacactgagtatgctcagagactggatgacctggcaggagagctgcagactctggaccta
tcagagatcagccacaagacctgtggcagtccatcatcaggtcaggattcgtgtttgtcc
tctccctgtggaggtcttggctgtgtggactctgagggtcgaaccaaatgtggaggtgaa
ggatgtgacggtgttgtgacgactgcccacaacgcctggaaaaaggcccaagactctgaa
caggaaatcattagtgccatggaggaagtggagaagctctccaaaatggtgtcggaggcc
aaactgaaggcggacgaggcgaagctgagcgctcaggatgtcctgatgaagaccaacaga
accaaacagaaagtccagcagagtaacgaggagctgagaagtctcatcaaacagatcaga
gacttcctcacacaggacgctgcagacctggagagcgttgagctggtggctaacgaggtt
ctggccatgcagatgccaactacaccggctcagctgcagaacctgaccgacgagatccga
cagaaggtgggagaactgggaaacgtggagaccatcctgcagcagagcgccgactacatc
cagagagctgagaacctgctggagcaggcccgccgaaccagtgaggaggcatcaaacgtg
aaggactctgcagagaaggtgaaacaagctctggaagaagctaagagagctcagaccgcc
gccagcagcgccatccagcaggctaccgccgacatccggaacaccaacaacctgctgtcg
tctgtgacctcggagacggcagatgcagagctgaagctggctaacgccacccaaaggctg
cagagtctcgagcaggatgtaaccctgctgagagacaaaggtgtgaacatcacagtgagc
accaaacgaaccaatgaggatgcagcgaccatcagaaagattgcagaggatgtcaagaaa
gacctagactccgagctgaagaataagtactccacagtggaggagcttattggtacgaag
gctgggggcctagcggacgcaaagaagagggcggagtcactgcagcaggaagccaaagat
ctgctgctgaaggccagcaacaaactgcagctgctcaaagatctggagaaatcttacgaa
gacaaccagcggactctggaggtgaaggcggagcagctggtggagttggaggcggctgtg
aaggagctgcttcaggagatcagccacaaggtcaccatctacagcacctgtgtgttctaa
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