Epinephelus lanceolatus (giant grouper): 117262442
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Entry
117262442 CDS
T07331
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117262442
Membrane trafficking [BR:
ely04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117262442
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
117262442
NCBI-ProteinID:
XP_033491299
LinkDB
All DBs
Position
11:46134481..46161378
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AA seq
1734 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDSSKPLEEELHFDDAGPKSVKPKAPITDVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNGASLRGPQIFLCFKRGRDKPPLTDLGVLYEWKEKLKPGCHIV
QTTPSGRPANISNSSSQRIYITYRRAPKSQPHTSLAVTDVCVIIPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGATV
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYSEENLSERQRSQLGLPSSDLGP
DGTRSVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHISHFMQNVPFPST
QRPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALAGVLSAPCPFIVGVDSRYFDLYVPP
ADISCVDLDTNTISQKDDKKALTWKILPRRACKHLLNTLNKLYQQLTEGGQLNREDVQME
HTVTDSELNGGKSLHTLELEIQEAFLRFMAAILRGYRSYLLPITQAPSEKTTDASSLFDI
QGFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKLFTTGSKMDS
ERPEETRLIELDESHRSEHTVYINPPELPPLPQGEEHPLCYSYSGFPVLNAELLEPLEGP
NPPSGGMASRHSSPASPTAIFRRSKQEIKSAQRMAKTHSSMPQMWSKCLLRHCYGLWFIC
LPGFVGTCHSKVRALRTAYDVLRKMQDKKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVILGVLQFKRAGRKQQTLN
RDPQLSDGSDLDTVSHGSLDSANDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSK
EEERMCSRESDSAPPVEDKGPRQSTSEIEIPVSSVSPSSGSCKSTDVSAGDGNRLLSSPS
SDAILCRVLPKSERPKSLDLSGGQGSLRLTVPHLGSAKQHHLAADRLHGVEEEETETDKQ
KPVVERNVSCSGAEERPGVLLERSISCSAATVRRTGVIERGFDPLSLMAADAVQECDQEN
SGTNRARRDLAEEIEMYMNNGNSPLSSRTPSMDLQNPSSPLFHPASSPHTSPRPSTLLRS
STHLPLPVKSKERLRPSPSLPLGVCTKDRERPSSLVSPSSPTPSSSSFSMDSLFTPTLDI
FKSSVISAGKGVAEKASRLYSRLSSQTSLTQDANCDRISVSSLTSGEADCSSLLDNDSCL
DPDGFTSPQHGSVSRLRRSPVVGHNNLGSPSTPNRVFRHNSFSGGLALPFKPPHTPDSSP
DTSRFQPTPNYTMEVLMSSCSLCKTCDCLVYDEEIMAGWTANDSNLNSTCPFCGTAFLPF
LNVEIKDLRPQSRSSKESNPVTEEVTSPSLNPEAKMSAADCAAQSSAAPPQEQESSRSAG
PAPVTVPYLSPLVLWKELESLLVNEGDQAISSPSVVDQHPIVFWNLVWYFRRLELPSNLP
ALILASQHCSHGDQTPQSVSSEDSKQVLVRIMWDNLKLHKDKVQPCYVLWNTHCANSLVR
SGLCEEGQVFTVELLQGFVRSIKKSDVYQPMSQIIQLLGPEMGFKRQRSLYRDLLFLALV
ALGKNNININAFDREYKLAYDRLTPNQVKLTHNCDRPPGAGVMECRRTFGEPGL
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaagggcctcgtgtagccgactactttgtggttgccggcctcaccgac
tcatccaagcctttggaggaggagctccactttgatgatgccggtcccaagtctgtgaaa
ccaaaagcccctatcactgacgtagctgtggtgattcgctccctgggtgaagaagtaccc
ccggggttcacctgtgttgaaagcaccccctcaggcctctctgcagagctcaatggagcc
agcctcaggggcccacagatattcttgtgcttcaagcgaggcagagataagcctccactg
acagatcttggggttctgtatgagtggaaagagaagctgaaacctggatgtcacatcgtc
cagaccaccccctcaggtcgccctgccaacatcagcaactcgtcatcccagcgcatctac
atcacctaccgccgtgcaccgaagagtcaaccccatacctcactggctgtcactgatgtc
tgcgtcatcatccccggcaagggcgagacgccccctcacaccttctgcaaggtggacaag
aatctcaacagcagcatgtggggatcctcagtctacctttgttataagaagtctctggct
aaaacaaacacaatcgcatacaaagcaggtctgctgtgtaggtatcctgaagaggactac
gagtccttcccactgcctgagtctgtgcctatgttctgcctgcctatgggggcaacagtc
gagtgctggccagcacacaccaaacactccctgcctgttttttccacatttgtcctgacg
ggtgcctctggagaaaaggtttacggagcagccatccagttctatgagccttactcagag
gagaacctgtctgagcgtcagcgctcgcagctcggcctgccaagctctgatcttggaccc
gatgggaccaggagtgtttacagcaacaagagcatctgtctgctctcccactggcccttc
ttccagtccttcagaagctttcttactttcctctaccgatactccatctctggaccacat
gccctgcctattgaaaagcacatctctcacttcatgcaaaatgtgccattcccttccact
cagagaccacgcatcctagtgcagctgtctccgcacgacagcctgatactgagccagcct
gtgtcctctccgctgcctctcagtggtggaagcctctccacgttactcctgaatctgggc
ccgaagaacgcagccactctgctggtgctggctgtcacagagcacaagatcctggttcat
tccctgcgtccagctgtgctcaccagtgttacagaggcccttgtgtctatgatctttccc
ttccactggccatgcccctacatccccctgtgccctcttgctctggccggtgtcctcagt
gcaccatgtcctttcatcgtgggtgtggactcccggtactttgacctctacgtgccccca
gctgacatcagctgtgtggatctggacaccaacacaatctcccaaaaagacgacaagaag
gctctaacgtggaaaatcttgcccaggagagcctgcaaacatctcctgaacaccctgaat
aagctctatcagcagctcactgagggtggtcagctgaaccgtgaagatgtgcagatggag
cacacagtgactgacagtgagcttaacggtgggaagagtctccacactctggagctggag
atccaggaggccttcctgcgcttcatggcggccatcctacgaggataccgctcctacctc
ctgcccatcacccaagccccctctgagaagaccaccgatgccagctccctctttgacatc
caaggcttcctgaaaagcagagaccgctcccaccagaggttttactctctcatgaccaag
actcaaatgttcagccgtttcatagaggagtgctcctttgtcagtgataaagacgccagc
ctggctttcttcgatgagtgtgttgataagctattcactactggcagcaagatggacagt
gagcggccggaggaaaccagactgatcgaactggatgaatcccaccgcagtgagcacacg
gtctatatcaaccctccagagctgcctccactaccacagggagaagagcatcctctgtgc
tatagctactctgggttccctgtgctgaatgctgagcttctggagccactggaggggcca
aatcctccatcaggaggcatggcctcacgccacagcagccctgccagccccacggccatc
tttaggcgctctaaacaggagatcaaatcagctcaaaggatggccaaaacccattcatct
atgcctcagatgtggtccaagtgtctgctgcgccactgctacggcctttggttcatctgc
ctgccagggtttgtcggcacctgccactcaaaggtgcgcgctctgcgtacagcttatgat
gtgctgaggaagatgcaggacaagaagctgcaggctccagatgaggtgtgttaccgtgtg
ttgctgcagctgtgcgggcagtacagccagccagtccttgctgtcagggtgttgtttgag
atgaagaaagccggagttcagcctaacgccatcacctatgggtactacaacaaggcggtg
ttagagagcacctggccctccaccaccaggggaggctactttttgtgggggaaactgaga
aacgtgatcctgggtgtgctccagttcaagcgagcagggaggaaacaacagacactgaac
agagaccctcagctttcagacggcagtgatcttgacacagtcagtcatggcagtttggac
agtgctaatgactctgccgagcgtacttccatcgacactgacttcactaaaatggactcc
agcgatgatggattcagtacaggtggacagtcagaccagggttacgattcactatccaaa
gaggaggagcggatgtgcagcagagagagtgacagcgcgccaccggtcgaagacaaaggg
ccgaggcagtccacgtctgagattgagattccagtcagcagcgtttctccttcttctgga
agctgcaaatcaaccgatgtcagtgcaggcgatggcaacaggctgctttccagtccctct
agtgacgccattctgtgtagagttctgccaaagtcagagaggccaaaatctctggacttg
tctggtggacaaggaagcctaaggctcaccgtccctcaccttggctcagcaaagcagcat
cacctagctgctgacagactgcacggggtagaagaagaggagacagagactgataaacag
aaacctgtggtggagagaaacgtcagctgcagcggtgcagaggagaggccaggtgtgctc
ctagagaggagtatcagctgtagtgctgcgactgtgagaagaacaggtgtcattgagagg
ggctttgatcccctgtcactgatggcagcagatgcggtacaagagtgtgatcaggagaac
agcggcacaaacagggcccgccgtgacctcgctgaagagatcgagatgtacatgaataat
ggcaacagccctctgagcagtcgcacacccagcatggacctgcagaacccctcgagccct
ttgtttcaccctgcctcatctcctcacacctccccgcgaccctccaccctgctccgctct
agcacacacctcccgttgcctgtgaaatcaaaggagaggctgaggccgtcgccgtctctt
cctctgggtgtctgtacaaaagacagggagagaccttcctccttggtgtcaccatcctca
cctactccctcctcctcatcgttctccatggactcactgtttaccccgactctggacatc
ttcaagagcagcgtcatatcagcagggaagggcgtggctgagaaggccagtcgcctctac
tctcgtctgtcctcccagacttcattaacacaggatgcaaactgtgaccggattagtgta
tcctcactgacctcaggagaggcagactgctcctcactgcttgataatgactcctgtctg
gacccagatggcttcacctccccccagcatggcagcgtttcccgactcaggaggagccca
gttgtgggtcataacaacctgggaagccccagcacgcccaacagagtgttcagacacaac
tccttctctggtggtttggcacttccttttaaaccccctcacactccagattcctccccc
gacaccagccgcttccaacccactcccaattacaccatggaggtgctgatgtccagctgt
tcactatgtaagacatgtgactgtctggtgtacgatgaggagatcatggctggctggaca
gcaaacgactccaacctcaacagcacttgtccgttctgcggcacagccttcctgcctttc
cttaatgtggaaatcaaagacctgagaccacagagcaggtcttctaaggaaagtaatcct
gttactgaggaggtcacgtcaccgtccctcaatcccgaggccaaaatgtctgcggcagac
tgtgcagctcagtcatctgcagctcccccgcaggagcaggagagcagcaggagtgctggg
cctgcgccagtgacagtgccctacctgagccctctggttctgtggaaggagctggagagc
ctgctggtaaatgagggcgaccaggccatctcctccccgagtgtcgtcgaccaacaccca
attgtcttctggaacctcgtgtggtacttcagaaggctggagttgccgagcaacctgccg
gctctcatcctggcctcccagcactgtagccatggagaccagactcctcagagcgtttca
tccgaggacagtaagcaggtgctcgtgaggatcatgtgggacaacctgaagttgcacaaa
gacaaagttcaaccctgctatgtcctgtggaacacacattgtgcaaactccctggttcgc
tccgggctgtgcgaagaaggccaagtcttcactgtggagctactgcagggttttgtgagg
agcattaagaagagtgatgtctatcagcccatgagccaaatcatccagctgctggggcca
gagatgggctttaagagacagaggagcctgtacagagatttgttgttccttgctttggtg
gctttgggaaagaacaatataaatatcaatgcttttgaccgggagtacaagctagcatat
gaccgcctcacccccaaccaggttaaactgacacacaactgtgaccgtccccccggagca
ggggtcatggagtgcaggaggacttttggggagcctggtctgtaa
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integrated database retrieval system
