Epinephelus lanceolatus (giant grouper): 117262549
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Entry
117262549 CDS
T07331
Symbol
si:dkey-30c15.12
Name
(RefSeq) LOW QUALITY PROTEIN: B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04371
Apelin signaling pathway
ely04514
Cell adhesion molecules
ely04520
Adherens junction
ely05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117262549 (si:dkey-30c15.12)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117262549 (si:dkey-30c15.12)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117262549 (si:dkey-30c15.12)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117262549 (si:dkey-30c15.12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117262549 (si:dkey-30c15.12)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117262549 (si:dkey-30c15.12)
04090 CD molecules [BR:
ely04090
]
117262549 (si:dkey-30c15.12)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117262549 (si:dkey-30c15.12)
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Major cadherins
117262549 (si:dkey-30c15.12)
CD molecules [BR:
ely04090
]
Proteins
117262549 (si:dkey-30c15.12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_4
RibLong
Invasin_D3
BACON_2
Motif
Other DBs
NCBI-GeneID:
117262549
NCBI-ProteinID:
XP_033491446
LinkDB
All DBs
Position
11:20795255..20802088
Genome browser
AA seq
759 aa
AA seq
DB search
MSLEPLPTIEFPHVSGGLKRMKREWVIPAINVPENERGPYPKSVVKIKSSNQERVAITYK
ITGPGADQPPEGVFTIDRRSGVLYVTQPLDREKTAKYTLWAHALVEDIKAEEPMELVINV
IDQNDNAPKFTQNPFYGKVSESTDAGERMLQHTLLAKMTNNAILRYKIKDQVPNEGMFDI
NPVSGLISVAAGGLDRETQPEYKLIIQTADMEGEGLTATCTVIITVTNANDNAPQFTATS
LSASVPENEVGVEVIRLEVTDKDELGSPNANSKYSIIKGNEGGEFSIITGANKMEGILET
AKVLDFESTPVLTLLVVATNEVPFSGQVSTSTATVTVTVVDENEPPVFIPAEVHVRISED
AETGSSVADLRAKDPDTTRKQSVRYKLHNDTARWLRVDKDSGSIKVQSNMDRESNYVKGS
KYTVLVLAYDNDTVPATGTGTLVVSLLDVNDHLPVIKQRKASLYSRDPLPALLDIVDLDG
PGHAGPFTVELQGEHRINWTVSTNATSNVAALAPKRELSPGDYHVLMRIYDVGMLYQDST
LNIEVCQCQGAVSTCFIPHSEPSDLDVSSLTTSFLAAIFLSFVYVAILLLLLLLFLRIRR
SSVKDVPLLEEVPRDHIVYYNEEGGGEEDQEYDLSQLHRGLDNRPEVFCTDXTVQSRPHY
RLQLQANEEIGTFIEDNLHAADSDPTAPPYDCLLVFDYEGVGSDAGSLSSLNSSDSDEKQ
DFPSLALWGPRFRRLADLYTGGIDEDDDTETLPGKTEWV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgagccactccccaccattgagtttccacacgtttcaggaggtttgaaacgg
atgaagagggagtgggttattccagcaattaacgttccagagaatgagcggggtccatat
cccaaatccgtggtgaagatcaagtcaagcaaccaggaaagggtggcgataacctacaag
atcactggacccggggctgatcagcctcctgagggtgtttttactattgataggcgatct
ggggtgctatatgttacccagccactggacagggagaagacagccaaatacactctatgg
gcccatgcactggttgaggacatcaaggctgaggagcccatggagctcgttatcaatgtc
attgaccagaatgacaatgctccaaaattcactcagaaccctttctatggcaaagtgagc
gaaagcactgacgctggtgagagaatgcttcagcatactttacttgctaaaatgacaaac
aatgctatattaaggtataagataaaggatcaggtgcccaatgagggcatgttcgacata
aacccagtgagtggactgatcagtgtggcggcaggcggactggacagagagacccagcca
gagtacaagctgatcattcaaactgctgatatggagggagaggggttaacagccacctgc
actgttatcattactgttaccaatgccaacgataatgctccgcagttcaccgccacatct
ctatccgcatcagtccctgagaatgaagttggagtggaggtaataagactagaggtcact
gacaaggatgagttaggatctccaaatgccaacagcaaatactcaataatcaaaggcaac
gaggggggagagttcagcatcatcacaggcgccaataaaatggagggaatcctcgaaaca
gcaaaggtgctggattttgagagcactcctgtcttaactctgttggtggtggcgacgaat
gaggtgccattttcgggacaggtgtcaacctcgacggccacagtcactgtcacagtcgtg
gacgagaacgagcctcctgttttcattccagcagaagtccatgtacgcatctcagaagat
gcggaaacagggagttctgtggccgacctcagagcgaaggacccagacacaaccaggaaa
cagagcgtcagatataaactacacaatgacactgccaggtggctgagagttgataaagac
tccggatcaatcaaagttcaaagcaacatggacagggaatcaaattacgtcaaaggcagc
aaatatacagtcctagttttggcttacgacaatgacactgtcccggctacagggacaggt
actctggtcgtgagtttgttagacgttaatgatcatctacccgtgatcaagcagaggaaa
gccagtctatacagtcgtgaccctttacctgccctgctggatatagtggacctagatgga
cctggtcatgctggaccgtttacggtggagcttcaaggagagcacaggattaactggact
gttagcactaacgccacaagcaacgtggccgccctggcccccaaacgagaattgtcgccc
ggggactatcatgtgctgatgcgtatctacgatgttggcatgctctaccaagacagcaca
ctgaacatcgaggtgtgccagtgtcaaggggctgtctctacctgtttcatcccacattct
gagcccagtgatctggacgtttcttctctcacaacttcatttctggcagcaatttttttg
tcttttgtgtatgtagcaatactgctcttgctgctgctgctgtttctgagaataaggagg
agctcggtgaaggatgtccctcttctcgaagaagtacccagagaccacattgtctactat
aatgaggagggaggaggtgaagaggaccaggagtatgacctgagccagctccacagaggg
cttgataatcgtcctgaagtcttctgcactgacntgactgtccagagtcggccacactac
cgcctacaactccaagccaacgaagagattgggacattcattgaggataacttgcacgct
gcagacagtgaccctacagctccaccttatgactgtcttttggtgtttgactatgagggt
gttggctcagatgcgggttcactcagttcactcaactcctcagactcagatgagaagcag
gactttccgagcctggccctctggggaccacgtttcagaaggttggctgacctgtacaca
ggcgggatagacgaggacgatgacacagaaacactgccaggaaaaacagaatgggtctga
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