Epinephelus lanceolatus (giant grouper): 117262616
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Entry
117262616 CDS
T07331
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117262616
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
117262616
NCBI-ProteinID:
XP_033491540
LinkDB
All DBs
Position
11:2401743..2642131
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AA seq
648 aa
AA seq
DB search
MLNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTHHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTAVQQKVGP
TPSAGMWESVSPTSTTTTTVRTPVSTRATEKTYTIPVTELGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgtttgtgctgcttctggccctccagctgctggtggtggca
gggctggtacgtgctcagacgtgcccttctgtctgctcctgtagcaaccagttcagcaaa
gtcatctgcacgcggcgaggcctgcgggatgtccctgatggcatctccaccaacacgcgc
tacctgaatctgcaagaaaatctcattcaggtcataaaggtggacagcttcaagcacctg
agacatctggagatcctgcagctgagcaaaaaccacatacgcaaaattgagcttggggcc
ttcaatggactggccagtctcaataccttggagctttttgataaccgcctcaccactatc
ccaaacggggcatttgagtacttgtccaaactaaaggagctttggctgaggaataacccc
atagagagcattccctcctatgctttcaacagagtgccctcattacggcggttggacctt
ggggagctcaaacggctctcctacatatctgagggggcctttgaagggctgagcaatcta
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaaccttattcccctggtg
aagctggatgaactggagatgtcggggaaccagctaactgtcatccgacctggctctttt
aaagggctcatccatttgcagaagctatggatgatgcatgcccagatccagaccatagaa
aggaactctttcgatgacctgcagtcactagtggagctcaatctagcccataacaacctt
accctcttgccccatgatctcttcactcctttacatcacctggagagggtgcacttgcac
cacaacccgtggaattgtaactgtgacatcctctggctaagctggtggcttaaggaaatg
gtaccagcaaacaccagctgctgcgcgcgctgcagctcaccaacccaccacaagggacga
tacattggcgagctggaccagaactactttcactgttatgctcctgttattgtggagcct
cccgcagacctaaatgtgacagagggaagtgctgcggagttgaaatgcagagccagctcc
ttgacctcagtaagctggattacacccaatggttccatcatgacacacggtgcttacaag
gtcagaatctccgtgctgaatgacggcactctgaacttcaccaatgttaccatgcaggac
acgggcacgtacacatgtatggtcagtaattctgcaggtaacacaacagcatctgccaca
ctcaatgtgtcctcaacagagaacagcagctttagctacttcaccacagtgacagtggaa
accatagaaacgccacataatgaaggcttcaccaccgcagtgcaacagaaggtaggcccc
actccctctgctggtatgtgggagtctgtttcacccacctctacaactaccaccacagtc
cggaccccagtctctacccgcgccacagagaagacttacacaatccctgtcacggagctg
ggtggggagggctcgctgaacggcttggatgaggtaatgaagacgaccaagatcatcatt
ggctgcttcgttgcaatcacactcatggcagcagtcatgctgattatcttctataagatg
cgcaaacagcaccaccagcagaaccaccatgcgcccacacgcaccattgagatcatcaat
gtggacgaggactgtgtaacaggaggcccgggcatggagggccacctgaccctgcctcct
cttgagcacgagcacctcaaccattataacacctataagactgcatacaaccatgcctcc
actatcaactccatacacagctcagcgcacgaacctttgttaatccgggccagctcaaaa
gacaatgtacaagagacccaaatctaa
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