Epinephelus lanceolatus (giant grouper): 117262619
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Entry
117262619 CDS
T07331
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04110
Cell cycle
ely04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117262619 (smc1b)
04114 Oocyte meiosis
117262619 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117262619 (smc1b)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117262619 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
117262619 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
117262619
NCBI-ProteinID:
XP_033491545
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All DBs
Position
11:complement(39726702..39748767)
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AA seq
1242 aa
AA seq
DB search
MGYLKQIDIENFKSWRGKKVVGPFMRFNCIIGTNGSGKSNVMDALSFVMGERAASLRVKH
LRDLIHGAHIGRPVQDTARVAMLYCDDEDQETAFCRTIVGDSSEFHINGVRVTLAKYTEE
LKKIGIVTKAQNCLVFQGAVESIALKDPKERTKMFETISQSNEYAAEYNKKKEALLKAKE
DTQFHFNKKKSATVERKQVSQERAEAQRYQGLVDDLYQTRLQLSLAELYHNENAIDALSD
SLREKQQAAAAKNSKVVNAEQTVKTHKKEHGRLNREQQHVEKEISAQEHILSQSRSQYIK
AKVNTSHHMKKAEEVHDALRKSQRLMAVKEQELAEGRQEISDLERAWRNYERQVQERGAS
PGRDIVLDEDQMERYTELKELARKQGAVLSQQAEKLQWEVRADYEKMAFDQRRKKEVEVA
IRNNQTQLDDLTRRAEKLEDYTKSCTLSLEDYRQREKSLSAELQQGRQRSEEVNQELGQV
LEELGNACLDSQESSRQTQRKELLERLRRLYPESVFGRLSDLCSPIHKKFQLAVTKVFGH
NMNAIVVTSETVARDCINFIKTERAERETFLPIDYLDVSPLNERLREMSGAKMVVDVVQV
NTGPAAALLRKVVQFVCGNALVCETIKDARSLAFDGQVRLKTVALDGTMFTKSGMISGGS
SYLRTKARCWDEKDMTKLRERKDQLTAELRDLIKLKRKDSELKQIIAQAQGAQTRLKYSK
TELENLRKKIILKCQAEISRMESELANLESQIQMQKESVEAKDEQMKRIRGQISQMEDLV
FSDFCAEIGVDSIREFEREHLKQQTELDKKRLEFESQCTRLKAQLEYRQDQLEQQKKKHR
KMEETIDKEERTMAEQRKDEEKLLAAVEEGQSKLLELKNQLLSKKSQVSAAKAELDQKTK
ILQEINKELVKLQREVMSAETALEQKRLIRHNLLLACKIQSLPVILLSGSLDEISEVELD
TESESTSATMNIYEREALLVIDYSGLDAEVRSLQADEEIEACLERLKESVSSIEAVLHRT
TAPNLKALAKMREVKDKLHEVTDAFDASTRAARKCSQEFEQVKARRLQLFSQCFEHVSIV
IDQIYKRICRNSSAQAILSAENPDEPYLGGINYNCVAPGKRFMSMDNLSGGEKAIAALAL
LFAIHSFCPAPFFVLDEVDAALDNTNISKVTSFIRDESRQNMQIIVISLKEEFFSKADAL
LGVYSDFDECMFSRILTLDLRPYPLVDEDNGSQAHAERTGLV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgggatatctgaaacaaatcgatattgaaaacttcaagtcatggcgagggaagaaagtt
gtcggtccgttcatgaggtttaactgtataattggtacaaacggctccggtaagtccaat
gtgatggacgccctgagctttgtcatgggggagcgggctgcgtctctccgggtgaagcac
ctccgggacctgatacacggagcccacatcgggcggccggtgcaggacaccgcgcgcgtc
gccatgctgtactgcgacgatgaggaccaggagacggccttctgccggaccatagtaggt
gactcctctgagtttcacatcaacggggtgcgtgtcactctggccaaatacacagaggag
ctgaagaagatcggcattgtgaccaaagctcaaaactgtcttgtgttccagggggcagtg
gagtccatcgctctgaaggacccaaaggagaggaccaagatgtttgagaccatcagtcag
tccaatgagtacgctgcagagtacaataagaagaaagaggccctgctgaaggccaaagag
gacactcagtttcacttcaacaagaagaagtctgctactgtcgagaggaaacaggtgtcc
caggaaagagcagaggcccagaggtaccagggactggtggatgacctttaccaaacccgc
ctgcagctgagcctggctgagctctaccacaatgagaacgccatcgatgctctcagcgac
agcctgagggagaaacagcaggctgcagccgctaagaacagtaaagtggtgaacgcagaa
cagacagtcaaaacccacaagaaggaacatggacgcctcaacagagagcagcagcacgtc
gagaaggagatcagcgcccaggagcacatcctgtcccagtctcgatcccagtacatcaaa
gccaaggtgaacacctcacatcacatgaagaaggctgaggaggtccatgacgccctgagg
aagagtcagaggctgatggctgttaaagagcaggagctggcagagggacggcaggagatc
tctgacctggagagggcctggaggaactacgagaggcaggtacaggaaaggggagcctcc
ccgggcagagacattgtgctggatgaagatcagatggagcgatacacagagctgaaggag
ctggcccgaaagcagggggcggtcctcagtcagcaggctgagaaactgcagtgggaggtc
agagcggattacgagaagatggctttcgaccagcgcagaaagaaggaagtggaggttgcc
atcaggaacaaccagactcagctggatgatttgacacgcagagcagagaagctggaggac
tacaccaagtcctgcacgttgtcccttgaggattaccgtcagcgggagaagagcctgagt
gcagagctgcagcagggccgccagcgcagcgaggaggtgaaccaggagctgggccaggtg
ttggaggagctggggaatgcctgtctggatagtcaggagagcagtcgtcagacgcagcgc
aaagagctgctggagaggctccgcaggctctaccctgaaagtgtgtttggtcgtctgtct
gacttgtgcagcccgatccataagaagttccagctggctgtcaccaaagtatttggccac
aacatgaacgccattgttgttacctcagagacagtagctcgtgactgtatcaatttcatc
aagacggagagagctgagcgtgaaactttcctgcccatcgactacttggatgtgagtcct
ctgaatgagcgactgcgggagatgtcaggtgccaagatggtggtcgatgttgtgcaggtt
aacactggcccagctgccgccctgctaaggaaagtggtgcagtttgtctgtggcaacgcg
ttggtttgtgagaccatcaaagatgcaaggagtttggcctttgacgggcaggtgcgcctc
aagacagtggcgctggatgggaccatgtttacaaagtctggcatgatctctggaggctcc
agttacctgcggaccaaagcccgctgctgggacgagaaggacatgacgaagctgagggaa
cgcaaggaccagctgacagcagagttacgcgatctgataaagctgaagcggaaggactca
gagctgaaacagatcattgctcaggctcagggcgctcagactcgcctcaaatactccaaa
actgagctggaaaaccttcggaagaaaatcatcctgaaatgccaagcggagatttctcgt
atggagagtgaattagcaaacctggagtctcagatccagatgcagaaggagagtgtggag
gcaaaggatgaacagatgaagaggatcagaggccagatcagtcagatggaagacttggtg
ttttctgacttctgtgctgagatcggtgtggacagcatcagagagtttgagcgggagcac
ctgaaacagcaaacagagcttgacaagaagcggctggagtttgagagtcaatgcactcgc
ctgaaagcgcagctggagtacagacaagaccaactggagcagcagaagaagaagcaccgc
aaaatggaggaaaccatcgacaaggaggagagaaccatggccgagcagaggaaggatgag
gagaagcttctggcagcggtggaggagggtcagagcaaactgctggagctgaagaaccag
ctgctgtctaagaagagccaggtgtccgctgccaaagctgagctggaccagaaaactaag
atcctacaagaaatcaacaaagagttggtgaagcttcaacgggaggtgatgtctgcagaa
acggccctggagcagaaacgcttgatcagacacaacctgctgttggcctgtaagatccag
agtctgcccgtcattctgctgtcagggagcctggatgaaatcagtgaggtggagctggac
acagaatctgagagcacttcagccaccatgaacatctacgagagagaagcacttctggtc
atcgactactctggcctggacgcagaagtcaggagtctgcaggcagacgaggagattgag
gcctgcttagagcggctgaaggagtcggtctcctctatagaagcagtgctgcatcgcacc
acagcgccaaacctgaaagctctggccaagatgagggaagtgaaggacaagttacacgaa
gtgacagatgcgtttgatgccagcaccagagcagccagaaaatgcagtcaggagttcgag
caggtcaaagcccgtcgcttacaactcttcagccagtgctttgaacatgtgtccatcgtc
atcgatcagatctataagagaatctgcaggaacagcagcgcccaggccattctgagtgca
gagaatccagacgagccgtacctcggtggcattaactacaactgtgtggcgccggggaaa
cgcttcatgtccatggacaatctgtctggcggagaaaaggccattgctgccctcgccctg
ttgttcgccatccacagcttctgccctgctccgttcttcgtcctggacgaggtggacgca
gccctggacaatactaacatcagcaaggtgaccagcttcatcagagacgagtccagacag
aacatgcagatcatcgtcatctctctgaaggaggagtttttctctaaggccgacgccttg
ctgggcgtctactcagattttgatgaatgcatgttcagccgtattctgaccctggacctg
cgaccctaccctctggttgacgaagacaacgggagccaggcgcacgcagagaggacggga
ctcgtgtag
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