Epinephelus lanceolatus (giant grouper): 117262640
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Entry
117262640 CDS
T07331
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117262640 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117262640 (chrne)
Ion channels [BR:
ely04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117262640 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SLATT_5
Motif
Other DBs
NCBI-GeneID:
117262640
NCBI-ProteinID:
XP_033491590
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Position
2:3388598..3406409
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AA seq
518 aa
AA seq
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MMAACRFWIFFGVVTILGTLMVQVQCNEESQLISDLFKSYNKNIRPVVKPEDKLDIQIKL
TLTNLISLNEKEETLTTNVWIEIQWTDYRLAWDESKYHGIGIIRVPCSTVWLPDIVLENN
IDGKFDVAYYANVLIYSSGGMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRSQTYSANE
VDLILAIGDNGETIEWVDIDPEAFTENGEWAIVHRPARKMVNTRYSPDDLEYQEIMFNLI
IKRKPLFYIINVILPCSLISSLVVLAYFLPAQAGGQKLTVAISVLLAQTVFLFLIAQKVP
ETSLSVPLIGKYLIFVMSVTTLIATNQIVVLNFSLRSPSTHTMSNTIKHVFLEMVPRFLG
MSPLVDDSEVTTEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTGSIVD
NMDVSSTANLYKSLAQAAPDIKRCVDACNFIAESTRQQNNIGSEIESWVLIGKMIDKVCF
WAAILLFTIGTVGIFLQGHFNQVPEFPFPGENKKYVPS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcttgcaggttttggatattttttggagttgtaactattctcgggacttta
atggttcaggtgcaatgtaatgaagagtcccagctgatcagtgacttgttcaaaagttac
aacaagaatattcgcccggtggttaaacctgaagacaagttggacattcagatcaagctg
accctcactaaccttatctccctgaatgaaaaggaggagactctgacaaccaatgtgtgg
atcgagattcaatggactgattatcgccttgcctgggacgaatctaaatatcatggcatt
ggtattattcgtgtcccgtgcagcactgtttggcttcctgacattgtccttgagaacaac
attgatggcaagtttgatgtggcctactacgccaatgtgttaatctatagcagtggtggg
atgtactggctgcctcctgctatctatcgcagcacgtgtgccattgagatcacctacttc
ccatttgattatcaaaactgcacattagcattcagatcccagacgtacagtgccaatgaa
gtagatctcattttagctatcggagacaacggcgaaactattgagtgggtagacatcgac
cccgaggctttcacagagaatggtgagtgggccattgtccatcgcccagccaggaagatg
gtcaacacacgctattccccagatgacctagagtatcaggagatcatgttcaacctgatc
atcaaaaggaagcccctcttctatatcatcaacgtcatcctgccctgctccctcatctcc
tcactggttgtgctggcctacttcctacctgcacaagccggaggacaaaagttgactgtt
gccatctctgtcttgctggctcagactgttttcctctttcttattgcccagaaggtccct
gagacatctctctctgtccctcttatcggcaagtacctgatctttgtgatgtctgtcact
actctcattgccacaaatcaaattgtggtgctgaacttctccctgcgcagccccagcact
cataccatgtccaataccatcaaacatgtgttcctagaaatggttcctcgcttcctgggc
atgtccccactggtggatgatagtgaggtgacaacagaggtaaatggagtgagagaacgg
cggcgcagctcctttggcctcatgcagagagcagaggaatatgtgctgaaacaacctcgc
agtgaaatgatgtttgacaaacaaagagagaggcatgggctcacaggatcaattgtggat
aatatggatgtcagcagcacagccaacctgtataagagtctggcccaagctgcacctgac
atcaagagatgtgtggatgcctgcaacttcattgctgagagtacaagacagcaaaataac
attggatctgaaattgaaagctgggtactgattgggaagatgattgacaaggtgtgtttc
tgggctgccatcctcctcttcaccatcggcacagtggggatctttttacaaggacacttc
aaccaagtgcctgaatttccatttccgggggagaacaaaaaatatgtcccaagttaa
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