Epinephelus lanceolatus (giant grouper): 117262650
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Entry
117262650 CDS
T07331
Name
(RefSeq) protocadherin beta-15-like
KO
K16499
protocadherin delta 2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117262650
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Protocadherins
117262650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
117262650
NCBI-ProteinID:
XP_033491601
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Position
2:37319482..37327456
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AA seq
992 aa
AA seq
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MDTRGEKKRLYCGKWHVVCHFALFICFLDAVRGQIRYSIPEELEHGAFVGNIAEDLGLDL
GKLSARRFRIVSGAKKQYVEVNLENGVLFVNERIDREELCEQSLSCSFHLQVVIENPLEL
YRVEMEILDVNDNSPSFPWTEFNLDISESAAPGSRFPLESAQDLDVGSNSLRTYLLSVND
HFLLDIQTRSDGSKFAELVLQNPLDREQQSAHQMVLTAVDGGAPERSGTAQIDITVLDAN
DNAPVFDQSFYRVRLAENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKVRQLFSVE
SRTGEIKVKGVIDYEKSRMHEIYVQAKDKGPSAVAVHCKVLVNVLDKNDNLPEVILTSVS
TPVQEDAPPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFKNYYTLVTCDFLDRE
AVAEYNITLTARDMGSPPLFTRKTILVQVSDVNDNAPRFKQPSYTVYLTENNAPGASVCS
VTALDPDSGQNAYLSYSILEGDIQGMPVSTYVSINSDNGNIYALRSFDHEQLKNFQITVQ
AQDAGFPPLNSNVSVTIFILDQNDNAPVIVSPVAQNGTAPSEAVPRSVDAGYLVTKISAV
DADAGQNSRLFYQMLQATDPSLFSIALYTGEIRTIRQLVEKEPTRHRLVILVKDNGQPPL
SATVSIILSVVDSLPDSQPDLGDLSLSPHHSSNFTLYLIVSLGAISFTFLVAIIVLVAVR
RLKGRPSSRESNFPSIGGCCCCCSRSEASTTTEVFKKSNLNVRMSSGASGCAETNSNGAL
PQVYCYKMCLTPESSKSDFMFLKPCSPVMSVQQNNAKSTDYLTSGWSALDRNELANNRAA
TPNELRYSNKDWTWTKNQRNSAYKRYSSANMEGTLTRQQKYDDHGFSCSVAPQYWTWGNH
MNDCKMSLQEGTVPHYSWTPKYTQPHSEPPDYQHNVYIPGTTSDYSTLKLAPRGELDVYN
TFSTFGKKKKFISSYEQSFDNDDGLISNDIYK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggacacacgcggagagaagaaaagactgtactgtgggaaatggcacgtagtttgccat
tttgcgttgttcatttgtttcttggatgcagtccggggacagattcgctactcgatccct
gaggaactggagcatggagcttttgttggcaatatagcagaggacctgggcttggatttg
ggaaagctctctgcgcgcagattccggatagtctcaggtgccaagaagcagtatgtggag
gtaaatttagaaaacggagttttatttgtcaatgaaagaattgatcgggaagaactatgc
gagcagagtttgtcctgttcttttcacttgcaagtggtcattgaaaaccctctggagctg
tacagggtggagatggagatattggatgtgaacgataactctcctagtttcccgtggacc
gagtttaatttggacatatcggagtccgctgcgccaggatcccgtttcccacttgagagc
gcacaggacttagacgtcgggtccaactcgctccgcacttatttgctaagtgtcaatgat
catttccttttggatatacagacgcgcagcgatggcagtaaattcgcagagctggtcctt
caaaacccactggacagagagcagcagagcgcgcatcaaatggtcctgacggcggtggat
ggaggcgcgccagagagatccggcactgcgcaaattgatatcaccgttttggatgcaaat
gataacgcgcctgtgtttgatcagtcattttacagagtgaggctggctgaaaacgcaccc
aagggcacagttgtcataaaactcaatgcgtccgacttagatgaaggtcccaatgctgac
atcacctattcattcagtggccacgcgcccatcaaagtgcgccagcttttcagcgtggaa
tcgcgcacaggggaaatcaaagttaaaggagtgatagattatgaaaagtccaggatgcat
gaaatttatgtacaagcaaaagataaaggcccctctgctgtagcagttcactgtaaagtg
ctggtgaacgttttagataaaaatgacaaccttccagaggtgattttaacatcagtgtcc
acacctgtgcaggaggacgcaccaccgggaacggtgatagccgtcatcagcgtgatggac
aaagactcgggtgaaaatgggaatgtggactgtgagatcccccatcacgtcccattccag
ctccactcatcctttaagaactattatacattagtaacgtgtgattttctggacagagag
gcggtcgcagagtacaacatcacccttactgcgcgagatatgggctccccacctttattc
acaaggaaaactattttggtccaagtgtctgatgtgaatgataacgcgccccgcttcaag
caaccctcctatactgtgtacctgactgagaacaatgcgccgggagcatctgtttgctct
gtgactgcactggatccagattctggtcaaaacgcatacctctcctattctatactggaa
ggtgacatacagggaatgcccgtgtccacatacgtgtccataaactcggacaacgggaac
atttacgcactgcgatccttcgaccatgaacaacttaaaaactttcagatcacagttcag
gctcaagacgcagggttcccacctctgaacagcaacgtatcagtgactatttttattttg
gatcaaaacgacaatgcacctgtaattgtttcaccggttgcgcaaaatggcaccgcgccc
agcgaagcggtgcccagatcagttgacgcaggttaccttgtcaccaaaatcagcgcggtg
gacgcagacgcaggtcagaactcgcgtcttttttatcagatgctccaagcaacagacccg
agcttgtttagcatcgctctatacacaggcgagatcaggacgatacgccagttggtggag
aaagaacccacgaggcacagattggtcattcttgtgaaggacaatggtcagccgcccctc
tcggccactgtttccatcattctgtcagtggttgacagcctgccagattcgcagcccgat
ttgggtgacctgtcactaagcccacatcacagctccaacttcaccctgtacttaatcgtg
tctctgggcgcaatctccttcacattcctggtggctattatcgtcctggttgcagtgcgg
agactgaagggcaggccgtccagcagagaatccaacttcccctccatcggcgggtgttgc
tgctgctgctcccgctcagaagcatccaccaccacagaggtgttcaaaaagtccaactta
aatgttcggatgtcttcaggcgcgtccggctgcgcggagacaaacagcaatggggcgctc
cctcaggtctattgctacaaaatgtgtctgacaccggagtcgtccaaaagtgacttcatg
ttccttaagccttgtagcccggtaatgtcagttcagcagaataatgccaagagcacagat
tacctcacctctggctggagcgcactggaccgtaatgaactggccaacaacagagcagcg
accccaaacgagcttaggtattcaaacaaggactggacctggaccaagaaccagcgcaac
tcagcatacaagagatacagttcagctaatatggagggcactcttactcgtcaacaaaaa
tatgatgaccatgggttttcctgctctgtggcaccacagtactggacctggggaaaccat
atgaacgactgcaagatgtctcttcaagagggaacagttcctcactactcatggacccca
aagtacactcagcctcattctgaaccaccagactaccagcacaatgtgtacatacctggc
accacgtctgactacagcactctgaagctggcacccagaggagagctggatgtgtacaac
actttctctacttttggaaagaaaaaaaaattcatctccagctacgaacaatcttttgac
aacgacgatggtctcataagtaatgacatctacaaatga
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