Epinephelus lanceolatus (giant grouper): 117262907
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Entry
117262907 CDS
T07331
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04137
Mitophagy - animal
ely04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117262907
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117262907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117262907
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
117262907
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117262907
Multi subunit type E3
ERAD complex
117262907
LMBR1L-GP78-UBAC2 complex
117262907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
G2BR
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_11
zf-RING_16
zf-RING_5
zf-C3HC4_4
zf_RING_Vps8
Prok-RING_4
FANCL_C
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
117262907
NCBI-ProteinID:
XP_033491985
LinkDB
All DBs
Position
11:complement(39172874..39186787)
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AA seq
639 aa
AA seq
DB search
MPFLFLERFPWPSLQTYTALSAALLGTVLTVCSLESSPEKTHSQPVHSSRVSRYIRDGVQ
YLSAGYGDVAADVLVHLLTDSVSVWVMVNTACCVLLLIAKLIQCVVFGPLRVSEKQHLKD
KFWNFVFYKFIFVFGVLNVQTVEEVVMWWLWFAILVFLHLLVQLCKDRFEYLSFSPTTHL
SSHARVLLLLVVLLLCCGGLATLCSRLARSQGHHNAAFMAAECMLVTVRTTHVMFRYSLH
PWDVNQDSSRENKSSYVYYTDLLMELLLLGLDLLHHIHMLLFSNIWLSMASLVIFMQLRF
LVQEVQKRIRRHQNYLRVLRNMETQFPVASADELAANNDDCAICWDVMSSARKLPCGHLF
HSSCLRSWLEQDTSCPTCRMSLNIGEGAGGGRVERETREAAAADNVAAVPGADARPHLNQ
LNHFFHFDGSRIASWLPSFSVEVMATTNFLGIAPANPSQINTMAQQIQEMFPQVPLQLIL
QDLEITRSLEVTTDNILEGRVQTAADPPLVFEQQVIQVTPPPEDEAAAISESEQGGGNET
EEEDEEEKQISVEEKMDDDDDLEVRFSSSAEQRQKLLLQRREELLQRARRDYLTRNTSSN
NPDSSLVSNALTSDPVTLRRETLASAAERRLQRQSDSAL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcttgttcctggagcggttcccctggcccagtttacagacgtacacggcgctg
agtgctgccctgctcgggaccgtcctgaccgtctgctccctcgagtccagcccggagaag
acccacagccagccggtccacagctccagggtcagccgctacatcagggatggtgtgcag
tacctgagtgcagggtatggagatgtggctgcagatgttctggtgcacctgctgactgac
agtgtctctgtttgggtgatggtcaacacagcctgctgtgtcctgctgctgatcgctaaa
ctcatccagtgtgtcgtgttcgggccgctccgcgtcagtgaaaaacagcacttgaaggac
aagttctggaacttcgtcttctacaagttcatctttgtattcggcgtcctgaacgtccag
acggtggaggaggtggtgatgtggtggctctggtttgccatcctggtcttcctccatctc
ctggttcagctctgcaaggaccgctttgaatatctgtccttctctccgaccactcacctg
tccagccatgcgcgggtgctgctgctgttggtggtgttgctgttgtgctgcggtggtctg
gcgactctctgcagccgcctggctcgtagtcaaggacaccacaacgccgcgttcatggct
gctgagtgtatgttggtgactgtcaggacgacacacgtcatgtttcggtactccctccac
ccgtgggacgtgaaccaggacagcagcagggagaataagtcctcctacgtttactacaca
gacctgctgatggagctgctgctgctgggcctcgacctgctgcatcacatccacatgctg
ctcttcagtaacatctggctgtccatggcgagtctggtgatcttcatgcagcttcgtttc
ctcgttcaggaggttcagaagagaatccgccgccaccagaactacctgcgagtcctccgc
aacatggagacccagtttcctgtggcgtctgcagatgaactggcagccaataacgatgac
tgtgcgatctgctgggatgtgatgagttcagctcggaagcttccctgcggtcacctcttc
cacagctcgtgtctgcgctcctggctcgaacaggacacatcatgtccgacatgccggatg
tctctgaacatcggtgaaggagcaggaggaggacgtgtggagagggaaaccagggaggct
gccgctgctgacaacgtggctgctgttcctggagccgacgctcggccgcacctcaaccag
ctcaaccacttcttccacttcgatggttctcgcattgccagctggttgcccagtttctca
gtggaagttatggccaccaccaactttctgggcattgccccggccaacccgtcgcagatc
aacaccatggctcagcagatccaggagatgtttcctcaggttcctctccagctgatcctg
caggaccttgagatcactcgatccctcgaggtcaccaccgacaacatcctggagggacga
gtccagaccgccgctgacccgccactggtctttgagcagcaggtcatacaggtgactcct
ccacctgaggacgaggctgcagccatcagcgagtcagagcagggcggcggtaatgagacg
gaggaggaagatgaggaggagaagcagatttctgtggaggagaagatggatgatgatgat
gacttggaggttcggttttcttcatcggcggagcagcgacagaagcttctgctgcagagg
agggaggagctgctgcagcgagcgcgcagggactatctgaccaggaacaccagctccaac
aaccctgactcctcccttgtcagcaacgctttgacctctgaccccgtcaccctgcgacga
gaaacattagcatcagcagcagaacggcgtctgcagagacagtctgactccgccctctga
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