Epinephelus lanceolatus (giant grouper): 117263277
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Entry
117263277 CDS
T07331
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117263277 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117263277 (rabgef1)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117263277 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
117263277 (rabgef1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
PIN_8
Motif
Other DBs
NCBI-GeneID:
117263277
NCBI-ProteinID:
XP_033492412
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All DBs
Position
11:complement(12448129..12458577)
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AA seq
511 aa
AA seq
DB search
MSQRTERRGGIHVDQSDLLCKKGCGYYGNAAWQGLCSKCWREEYQRVRQKQIQDDWALAE
KLQREEEAAYASSHGAQTQSHPQPTAPQPHPGHASLGPFSKFEEKKTNEKTRKVTTVKKF
FSPSSRTAPKKETQEGKTPSPSISRHASFDTDQVSKDFVDFLKNLQKPGREIHKQCRAFI
VNMSSKKDLSADELSECVQDFYQNLADRLMGHFKGSSESVEQVMDQVEKYIMTRLYKSVF
CPETTDDEKKDLATQNRIRALHWVTIQMLCVSMDEEIPEVSENVVKAITDIIEMDSKRVP
RDKLGCITRCSKHIFSAIRITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCNP
SRLMTGEDGYYFTNLCCAAAFIEKLDAQSLNLSPEEFERYMSGQASPRCSSEGDWSQADP
APAAANPVLAQLNHNLEVLSGLSSRQETLMEAAQSLQADLLSWPQSVQREVHDILEKYPL
EVLSRTVSAIDANNVDNDNLPPPLTPQVFAG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggacggagcggcggggggggatacacgtggaccaatcggacctgctgtgc
aaaaagggatgcggttactatggcaacgcagcctggcagggcctgtgctccaagtgctgg
agggaggagtaccagcgggtgcggcagaaacagatccaggacgactgggccttggcagaa
aagttgcagcgggaggaggaggcagcgtacgccagcagtcacggagcacagacacagtcc
cacccccagcccacggcaccacagccacatccggggcacgcctccctgggacccttctcc
aagtttgaggagaagaagaccaacgaaaagacacggaaagtgaccaccgttaagaagttc
ttcagcccttcgtcacgcactgctcccaagaaagaaacccaagagggcaagacacccagt
ccgtccattagccgccatgccagcttcgatacagaccaggtgtccaaggactttgtggac
ttcttgaaaaatctccaaaagcccggccgggagatccacaagcagtgccgagccttcatt
gtgaacatgtcgagcaagaaggacctgagtgctgatgagctgtcggagtgtgttcaggat
ttctaccagaacctagccgaccggttgatgggtcactttaaaggctcttcagagtctgtg
gagcaggtgatggaccaagtggaaaagtacatcatgactcgtctgtataagagcgtgttc
tgtcctgaaaccactgatgatgagaagaaggatctggccacgcagaacaggataagggcc
ttacactgggtgaccatccagatgctctgtgtgtctatggacgaagaaatccccgaagtc
tctgagaacgtggtcaaagcaataacagatatcattgagatggactcgaagagggttcct
cgggacaaactcgggtgcatcactcgctgcagtaaacacatcttcagcgccatcaggatc
accaagaacgagccggcctcagctgacgacttcctcccagcgctcatttacatcgtgctc
aaagccaaccctccacgacttcagtccaacatccaatacatcacccgcttctgtaacccc
agcaggctgatgaccggagaggacggatactacttcaccaacctgtgctgcgcagcggct
tttatcgagaagttggacgctcagtctctgaatctttccccagaggaattcgagcgctac
atgtcaggccaagcctcgccgcgatgcagctcagagggcgactggtctcaagctgacccg
gcaccagccgctgccaacccggtcctggctcagctcaatcacaacctggaggtgctgtcg
ggcctcagcagccggcaggagacgctgatggaggccgctcagagcctgcaggccgacctc
ctctcctggccccagagcgtgcagagggaggtgcacgacatcctggagaaataccctcta
gaggttctgtctcgcaccgtttcggccattgatgccaataacgtggacaatgacaacctg
ccgccgccgctcacgccacaggtgttcgctgggtag
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