KEGG   Epinephelus lanceolatus (giant grouper): 117263277
Entry
117263277         CDS       T07331                                 
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
  KO
K20131  Rab5 GDP/GTP exchange factor
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:ely00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    117263277 (rabgef1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ely04131]
    117263277 (rabgef1)
Membrane trafficking [BR:ely04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    117263277 (rabgef1)
 Protein recycling
   Other Rab GTPase associated proteins
    117263277 (rabgef1)
SSDB
Motif
Pfam: VPS9 DUF5601 zf-A20 PIN_8
Other DBs
NCBI-GeneID: 117263277
NCBI-ProteinID: XP_033492412
LinkDB
Position
11:complement(12448129..12458577)
AA seq 511 aa
MSQRTERRGGIHVDQSDLLCKKGCGYYGNAAWQGLCSKCWREEYQRVRQKQIQDDWALAE
KLQREEEAAYASSHGAQTQSHPQPTAPQPHPGHASLGPFSKFEEKKTNEKTRKVTTVKKF
FSPSSRTAPKKETQEGKTPSPSISRHASFDTDQVSKDFVDFLKNLQKPGREIHKQCRAFI
VNMSSKKDLSADELSECVQDFYQNLADRLMGHFKGSSESVEQVMDQVEKYIMTRLYKSVF
CPETTDDEKKDLATQNRIRALHWVTIQMLCVSMDEEIPEVSENVVKAITDIIEMDSKRVP
RDKLGCITRCSKHIFSAIRITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCNP
SRLMTGEDGYYFTNLCCAAAFIEKLDAQSLNLSPEEFERYMSGQASPRCSSEGDWSQADP
APAAANPVLAQLNHNLEVLSGLSSRQETLMEAAQSLQADLLSWPQSVQREVHDILEKYPL
EVLSRTVSAIDANNVDNDNLPPPLTPQVFAG
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgagtcagcggacggagcggcggggggggatacacgtggaccaatcggacctgctgtgc
aaaaagggatgcggttactatggcaacgcagcctggcagggcctgtgctccaagtgctgg
agggaggagtaccagcgggtgcggcagaaacagatccaggacgactgggccttggcagaa
aagttgcagcgggaggaggaggcagcgtacgccagcagtcacggagcacagacacagtcc
cacccccagcccacggcaccacagccacatccggggcacgcctccctgggacccttctcc
aagtttgaggagaagaagaccaacgaaaagacacggaaagtgaccaccgttaagaagttc
ttcagcccttcgtcacgcactgctcccaagaaagaaacccaagagggcaagacacccagt
ccgtccattagccgccatgccagcttcgatacagaccaggtgtccaaggactttgtggac
ttcttgaaaaatctccaaaagcccggccgggagatccacaagcagtgccgagccttcatt
gtgaacatgtcgagcaagaaggacctgagtgctgatgagctgtcggagtgtgttcaggat
ttctaccagaacctagccgaccggttgatgggtcactttaaaggctcttcagagtctgtg
gagcaggtgatggaccaagtggaaaagtacatcatgactcgtctgtataagagcgtgttc
tgtcctgaaaccactgatgatgagaagaaggatctggccacgcagaacaggataagggcc
ttacactgggtgaccatccagatgctctgtgtgtctatggacgaagaaatccccgaagtc
tctgagaacgtggtcaaagcaataacagatatcattgagatggactcgaagagggttcct
cgggacaaactcgggtgcatcactcgctgcagtaaacacatcttcagcgccatcaggatc
accaagaacgagccggcctcagctgacgacttcctcccagcgctcatttacatcgtgctc
aaagccaaccctccacgacttcagtccaacatccaatacatcacccgcttctgtaacccc
agcaggctgatgaccggagaggacggatactacttcaccaacctgtgctgcgcagcggct
tttatcgagaagttggacgctcagtctctgaatctttccccagaggaattcgagcgctac
atgtcaggccaagcctcgccgcgatgcagctcagagggcgactggtctcaagctgacccg
gcaccagccgctgccaacccggtcctggctcagctcaatcacaacctggaggtgctgtcg
ggcctcagcagccggcaggagacgctgatggaggccgctcagagcctgcaggccgacctc
ctctcctggccccagagcgtgcagagggaggtgcacgacatcctggagaaataccctcta
gaggttctgtctcgcaccgtttcggccattgatgccaataacgtggacaatgacaacctg
ccgccgccgctcacgccacaggtgttcgctgggtag

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