Epinephelus lanceolatus (giant grouper): 117263351
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Entry
117263351 CDS
T07331
Symbol
si:ch211-81a5.1
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117263351 (si:ch211-81a5.1)
04121 Ubiquitin system [BR:
ely04121
]
117263351 (si:ch211-81a5.1)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117263351 (si:ch211-81a5.1)
Membrane trafficking [BR:
ely04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117263351 (si:ch211-81a5.1)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117263351 (si:ch211-81a5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-rbx1
Zn_ribbon_19
zf-ANAPC11
zf-C3HC4_3
U-box_ZFPL1
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
117263351
NCBI-ProteinID:
XP_033492516
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All DBs
Position
12:19168974..19177138
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AA seq
295 aa
AA seq
DB search
MAEAADTPQHRFFCHCCKCETNPKLPDFVCPRCDSDFIEEVTEDSSLLQNNTSAASEESN
SLFSDLWQLLFMERSALLSHPPSSESDPDDSEQVSAGQSRPSPVLPSAAEAGEPESSSQS
EQERSSRPEQRPAVEGIVQQFLAGLFANNGNPGAAPAALSGMLQLHSNPGDYAWGQGGLD
AVITELLGQLESTGPPPAEKEMISSLPTVCISQEQTDCRLECPVCREEYSSGESVRKLPC
LHYFHSECIVPWLELHDTCPVCRKSLDGVDNSLLPTSELPEARSMRTEQQERQAI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggacacaccacaacaccggtttttctgtcactgctgtaaatgtgaa
acaaaccccaaactcccggatttcgtctgtcccagatgtgactccgacttcattgaagag
gtgacagaagactcgagtctcctgcagaacaacacatcagcggccagtgaagaatcaaac
tcgttgttctcagacttatggcagctgctgttcatggagcgctctgctctgctgtcgcat
ccgccctcctcagagtctgacccagatgacagcgagcaggtatctgcaggtcagagccgt
ccttctccagtgctgccgagtgctgccgaggctggagaaccagagtcttcttcccagtct
gaacaagagaggtcatccaggcctgaacaaaggcctgcagtggaagggatcgtgcagcag
ttcctggctggcctgtttgccaacaacggaaaccctggtgctgccccagctgcgctatcc
ggcatgctacagttgcactcaaaccctggggattacgcgtggggtcagggaggtctggac
gctgtcatcacagagttgttaggacagttggagagcacaggtccgccccctgcagaaaag
gagatgatctcatccctgccaacagtttgcatctctcaggagcaaacagactgcagactg
gagtgtcccgtttgtagggaggagtattcatcaggggaatccgtcaggaagctaccctgc
ctccattacttccacagtgaatgtatagtgccttggctggagctgcatgatacatgtcca
gtgtgccgaaaaagcctagacggtgttgacaacagcctcctgccaacatcagaactccca
gaagctcgctccatgaggacagagcaacaggagaggcaggcgatctga
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