Epinephelus lanceolatus (giant grouper): 117263512
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Entry
117263512 CDS
T07331
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117263512 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117263512 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117263512 (vps28)
Membrane trafficking [BR:
ely04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
117263512 (vps28)
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117263512 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
117263512 (vps28)
Exosomal proteins of colorectal cancer cells
117263512 (vps28)
Exosomal proteins of bladder cancer cells
117263512 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
117263512
NCBI-ProteinID:
XP_033492833
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All DBs
Position
12:24284565..24292491
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AA seq
223 aa
AA seq
DB search
MFHGIPVTGGVGAAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTASCSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccatgggataccagtgacaggaggtgtgggggcagctccggccaacaagcctgag
ttatatgaggaggtgaaattatacaagaatgcaagagaacgagagaagtatgataacatg
gcagagttgtttgctgtcgtcaagactcttcaggccctggagaaggcttacatcaaagac
tgcgtcacacctaatgaatacactgcttcctgttcaagactgttggttcagtataaggct
gctttcaaacaggtgcagggctctgacgtgggctccattgatgatttctgtaggaagtat
agactcgactgtccactagcgatggaaaggatcaaggaggatcggccaatcaccatcaag
gatgacaagggcaacctgaaccgctgcattgcagatatagtttctctcttcattactgtg
atggacaagctgagactggagatcagggccatggatgagatccagccagacctgagggaa
ctgatggaaaccatgaacagaatgagcaacatgcctccagactcagaggctaaggacaaa
gtcagcctctggttgaccaccctcagcagcatgtcagcctcagatgagctggacgataat
caggtgcgccagatgctgtttgatctggagtcggcctacaacgccttcaaccgcttcctc
cactcctcctaa
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