Epinephelus lanceolatus (giant grouper): 117263595
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Entry
117263595 CDS
T07331
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117263595 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ely01007
]
117263595 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ely03016
]
117263595 (vars2)
Enzymes [BR:
ely01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
117263595 (vars2)
Amino acid related enzymes [BR:
ely01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117263595 (vars2)
Transfer RNA biogenesis [BR:
ely03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117263595 (vars2)
Prokaryotic type
117263595 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
117263595
NCBI-ProteinID:
XP_033493027
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All DBs
Position
12:complement(4749029..4845878)
Genome browser
AA seq
934 aa
AA seq
DB search
MFRVDNMNAARPGYSWKQLNGFLVCSSTSVLLRMWRAGRVLSLRLVERGAARHHSNTPKP
PSLSSSSRRPQAEKQRRRREREEAILSNQHSAAEDNVLKWSEKQKIVYIAQTPHGTKKDT
SLSFPSSYSPEYVESSWYQWWEKEGFFCPEQHERLSHSVDQTFSLCIPPPNVTGTLHLGH
ALTVAVEDALVRWRRMQGYRVLWVPGCDHAGIATQTVVERRLLREGGKRRQDFTRQEFLR
EVWKWKNEKGEEIYEQLRRLGASLDWSRACFTMDPGFSRAVTEAFVRLCDSGLLYRSEAL
VNWSCALESAISDIEVYSMELSEQTMLPVPGYDNKVEFGTMLTFAYPIEGHDGEVVVSTT
RPETMLGDVAIAVHPDDPRYQAVHGKQCRHPFTNRLLPIITDSMVDMELGTGAVKVTPAH
DHTDFLLSQKHSLPRLTVIGGDGTMTPPCGQWLEGVKRFDARQLVVDALVEKRLFRGKKN
HAMSLPICSRSGDVIEPLLKKQWFVCCDEMAKKAIQAVEDGQLEIIPHYYTKTWKNWLSN
ISDWCISRQLWWGHQIPAYQVELPKSTDKQEEQWVWGRSEDEARQRAAVKYGVKPEDITL
TQDPDVLDTWFSSGLFPFAMLGWPEQTSDLQRFYPNSILETGSDLIFFWVARMVMLGTEL
TGQLPFKQVLLHSLVRDKHGRKMSKSLGNVIDPLDVIHGVSLERLQNKVSEGNLDPREQL
VAMEAQRKDFPIGIPQCGTDALRFALCSHKMQGEDISLSISQVLSCRHFCNKMWQTLRFT
LGVLGDNTTPVGTLQETTALSSMDRWICSRLYSTVVQCERAFEAYELHAVTSALYSFWVH
SLCDVYIECVKPVLVRQDEGAVVQTDTEHSVRARQVANSVLYHCVSMSLALLSPFMPFIT
EELWQRLQPFICGAATQTTLCLQPYPCSSQLVGP
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgggttgataacatgaacgcagcgcggcctggttacagctggaaacaactgaac
gggtttttggtctgcagttccaccagtgtgttactgaggatgtggagggcaggtcgtgtc
ctgagtttgaggctggtggagagaggagctgccagacaccacagcaacacaccgaaacct
ccatccctctcttcatcctctcgacgcccccaagcagagaaacagaggcgtagaagagag
cgggaggaggccatattgtcaaatcaacacagtgctgctgaagataatgtgttgaaatgg
agcgagaagcagaagatagtgtacattgctcaaacacctcatggaacaaagaaagacacc
agcttgtcgttcccatcctcgtacagtccagagtatgtggagtccagctggtatcagtgg
tgggagaaggagggattcttttgtccagagcaacatgagaggttatctcacagtgtggat
cagaccttctctctgtgtatccctccaccaaatgtgactggtacgctgcacctgggccat
gctctgactgtagctgtggaagacgctctggttcgatggaggaggatgcaaggctacaga
gtactgtgggtccctggatgcgatcatgcaggaattgcaacacagacagtggtggagagg
agactgctgagggaaggagggaagcgcagacaggacttcaccaggcaggagtttctacgt
gaggtgtggaaatggaagaacgagaaaggagaagagatatacgagcagctgaggaggctt
ggagcttctctggactggagcagagcgtgtttcactatggatccaggtttcagcagggct
gtgactgaggctttcgtcaggctgtgtgactctggtctgctttatcgctcagaggctttg
gtcaactggagctgtgcactggaatctgccatctctgacatagaggtttactcaatggag
ctttctgagcagaccatgttgcctgttcctggttatgataacaaggtggagtttggaacc
atgttgacctttgcataccctatagaaggccatgatggagaggtggtagtgtccaccacc
cgtcctgagactatgctaggagatgtggccatagctgttcacccagatgatcctcgatat
caggctgttcatgggaagcagtgcagacaccccttcaccaacagactcctgcccatcatc
actgattcaatggtggacatggagctaggaactggtgcagtgaaggtgacccctgctcat
gaccatactgacttcttgctgtcacagaaacactcattgccacgcctcactgtgattgga
ggagatgggaccatgacacccccctgtggacagtggctggagggagtgaagcgtttcgat
gccagacagctcgttgtagatgccctggttgagaagcggctgtttagaggaaagaagaat
cacgccatgagtctacctatttgcagccgatcaggagacgtcattgaacctcttctaaag
aagcagtggtttgtttgctgcgatgaaatggctaaaaaagctatacaggctgtggaggac
ggacagttggaaatcatccctcactactatacgaagacatggaagaactggctgtctaac
atcagtgattggtgcatttccaggcagctttggtggggtcatcagatccctgcttaccaa
gtggaacttcctaagtctactgacaaacaggaggaacagtgggtttggggaaggagcgaa
gacgaggcccgacaaagagccgctgtcaaatacggagtgaagccagaagacattactttg
actcaagatcctgatgtcctggatacgtggttctcctctgggctgtttccctttgcgatg
cttggctggcctgagcagaccagtgacctgcagcgcttctaccccaattccattctggag
acaggcagtgacctcatcttcttctgggtggcaaggatggtaatgctgggcacagagctg
actggacagctgccctttaaacaggttctccttcactccctggtgagagataaacatggc
aggaaaatgagtaaatctctgggaaacgtcattgacccattagatgtaatacatggagta
tctctggagagacttcaaaacaaagtgagtgagggaaaccttgacccgagggagcagctg
gttgccatggaagcacagaggaaagacttccccatagggatccctcagtgtgggactgac
gctctgagattcgccctttgctctcacaagatgcagggagaagacatcagtctgtccatc
tctcaggtcctgagctgcagacacttctgtaataaaatgtggcagacgctcagattcaca
ctgggagtgcttggtgacaacacaacaccagtgggaacactgcaggagacgacggctctg
agcagcatggaccggtggatctgctctaggctctacagcacagtggtacagtgtgagcgg
gcctttgaagcctatgagctgcatgctgtcacatctgccctgtactccttctgggtccac
agcctgtgtgatgtctacatcgagtgtgtgaagcctgtgctggtccggcaggatgagggg
gcagtggtccagacagacacagagcacagtgtcagagcaaggcaggtggccaacagtgtc
ctctatcactgtgtgtctatgtctctggccttgctctcccccttcatgcccttcatcacc
gaggagctgtggcagagactccagccattcatatgtggagctgctacccagaccactctg
tgtttacagccatacccctgctcctctcagctggtaggaccataa
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