Epinephelus lanceolatus (giant grouper): 117263607
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Entry
117263607 CDS
T07331
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117263607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117263607
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117263607
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117263607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
7tm_6
Motif
Other DBs
NCBI-GeneID:
117263607
NCBI-ProteinID:
XP_033493052
LinkDB
All DBs
Position
12:complement(10694307..10744389)
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AA seq
936 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRHHI
RMLETILRMLDNDSVQVDAIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPQTLVA
TSPPGHSHLEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSSSSSSSSSSSSVSGLTSSSLVSMATIAAGGLSSSGGNSHH
GSSGGLLSNTSAGSYSNATQQQPHPSAQQQQAKNLVSSTSSTPISIPITSTNSHLVSSAP
SPPNAITQGLFTSTSQPQSLSGHTPTSNSLGLSLGLSLGKGGMSSSITTSPMSGSLGLSG
MPASLSTMASLLSGSTPAPYAQAAASGAIGSGLPGSLGGIGISPTTANTTVGSIGSGSIT
VGGPTSSTGGLLGPAPGLTSVGSGILGLSSVQSGVQVSSLVSLSPVGGLAPGSGVGVIGS
NGGSSGSGGSGVVGGSSSLSIRPPSQQKQNGSTSYSAVVADSTTDSALTSASQSQSSQPS
SLTSTANQPKDTGPSLLGSLSLSSSSPSPAFYSEAKTVSGGSLLNGPLSYSQSSDSIKPQ
EPLSSLKSMAERAALSSGMEGDMPSLHLTPDIFPSSTTAPSGPPSAPQPSQSEVSIPPSL
GVCPLGPVPLSKDQLYQQAMEEAAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHS
DTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITD
EFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggggaaatagatcgatgtctgaaaaaagtagcggag
ggagtggaacagttcgaagacatctggcaaaagcttcacaatgcagccaacgcaaaccag
aaggagaaatatgaagcagacctcaagaaagagattaaaaagctacagcgtcttcgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaaaaggcagctagtagagaac
cgcaaactcatagaaacgcaaatggagcggttcaaaatagtggagagagaaaccaagacg
aaagcgtactcgaaagaagggttgggtctggcccaaaaggtggacccggcccagaaggag
aaggaggaggtcgggacgtggctaacgaatacgatagacacattgaacatgcaggtggac
cagttcgagagcgaagtggagtctctttcagtccagacgagaaaaaagaaaggagacaag
gagaagcaggatcggattgaggagctgaagaagttcattgaaaaacatcggcaccacatc
cggatgctggagaccatactgaggatgctggacaatgactcagtgcaggtggacgccatc
aggaagatcaaggatgatgtggagtattatctagactcgtcacaggatccagactttgag
gagaatgagtttctgtacgacgacctggacctggaagacatccctcagacactagtcgcc
acctccccgccgggacactcacacctggaggatgagattttccagcactccagcagcaca
cccacctccaccacctcatcttcacccatccctccctcgcctgccacttgcactacggag
aattcggaagatgacaaaaagaggggacgctcaacagacagtgaagtcagtcagtcacct
gtgaagaacggaaacccctcttcctcattatcctcttcctcttcttcctcctcttcctcc
tcctcctcctcttcctcctcttcttcttcctctgtctcgggactgacctcatcctcactt
gtctctatggcgaccatcgcggcaggagggctcagcagctctgggggcaacagtcatcac
ggcagctcggggggtctcctctccaacacttccgctggcagctacagcaatgccacccag
cagcagccgcacccgtcagcacagcaacaacaggccaaaaacttagttagctccacctcc
tcaactccaatctctatccccatcacctccaccaacagccatctggtctcttctgccccc
tctccacccaacgccatcacacaggggctcttcacttcaacctcccagccccagtctctg
tccgggcacacaccaacctccaacagtcttggcctcagtctgggcctctcgctggggaaa
ggcggcatgtccagctcgatcaccaccagcccaatgtccgggagccttggcttgtcaggg
atgccggcatccctgagcaccatggcgagccttctgtcgggctccaccccggcaccctac
gctcaggcagctgcctcaggagcaatcggctctggcttgcctggctctcttggcggcatc
ggcatcagccccacaacagccaacacaacagtgggctccatcggcagcggaagcatcaca
gtcggcgggccgacatcctcaacaggaggtctgctgggcccagctccagggctgaccagt
gtcggctcagggattctgggtctgagttccgttcagtcaggggtgcaggtgtcttccttg
gtgtcactgagcccagtaggaggtttagcgccaggtagcggagtgggagtcatcgggagc
aacggaggcagctcgggatcaggggggagcggagtggtgggaggaagctcgtcactctcc
atcaggccgccaagccaacagaagcagaacggtagcactagttacagcgctgtggtagca
gacagcacaacagactccgccctcaccagtgccagccaatcacaaagcagccaaccctca
tctttgacctccacagccaatcagcctaaggacactggtcccagtttactgggctcacta
agtttgtcatccagctccccgtcgccagccttctacagcgaggccaaaacggtgagcggc
ggcagccttctgaacgggccactgtcctactcacagtcctccgacagcatcaagccccaa
gagcctctgagcagcctgaagtccatggccgagcgagcagcactcagctcagggatggag
ggagacatgccctccctgcacctcaccccagacatctttcccagcagcactacggccccc
tcaggccccccgtcagcacctcagccctcgcagtcagaagtcagcatccccccatcgttg
ggggtctgcccgctggggccagttcccctgtccaaagaccagctctaccaacaggccatg
gaggaggcagcgtggacgcacatgccccacccgtctgactccgagaggatcaggcagtac
ctgatgaggaacccgtgccccaccctgcctttccaccaccaggtgccaccgccccactct
gacactgtagagttttaccagaggctttccacagaaactctcttcttcatcttttactac
ctggagggcactaaggcccagtatctggcagccaaagccctgaagaagcagtcatggagg
ttccatacaaagtacatgatgtggtttcagaggcacgaagaacccaagaccattacagat
gagtttgagcagggaacatacatttactttgactatgagaaatggggccagcggaagaag
gaaggcttcacgtttgagtaccggtacctagaagaccgagacctccagtga
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