KEGG   Epinephelus lanceolatus (giant grouper): 117263713
Entry
117263713         CDS       T07331                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03082  ATP-dependent chromatin remodeling
ely03083  Polycomb repressive complex
ely04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117263713 (rbbp4)
   03083 Polycomb repressive complex
    117263713 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    117263713 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ely03036]
    117263713 (rbbp4)
Chromosome and associated proteins [BR:ely03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     117263713 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     117263713 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     117263713 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     117263713 (rbbp4)
    PRC2.2
     117263713 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     117263713 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    117263713 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    117263713 (rbbp4)
   NuRF complex
    117263713 (rbbp4)
   NuRF complex (fruit fly)
    117263713 (rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 117263713
NCBI-ProteinID: XP_033493211
LinkDB
Position
12:complement(43511490..43520816)
AA seq 425 aa
MADKEAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFEASHYDSEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSEVLVFDYTKHPSKPDASGECHPDLRLRGHQKE
GYGLSWNPNLSGSLLSASDDHTICLWDISAVPKEGKIVEAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSTD
PEATA
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcggacaaggaagcaggagcatttgatgatgcggttgaagagagggtgataaacgag
gagtacaagatctggaagaagaacactcccttcctgtacgacctggtgatgacccacgct
ctggagtggcccagcctgactgctcagtggctgcctgacgtctccaggccggaggggaag
gattacagcgtgcaccggctggtgttgggcactcacacatctgatgagcagaatcacctg
gtcatcgccagcgttcagctgcccaacgatgacgcccagtttgaagcctcacattatgac
agtgagaaaggagagttcggaggctttggctcagtgagcggcaagatcgagatagaaatc
aagatcaaccatgaaggagaggtgaatcgtgctcgctacatgccccaaaacccctgcatc
atcgccaccaagacccccacctcagaggtgctggtgtttgactacaccaaacacccctcc
aagccagatgcttctggagagtgtcaccctgatctgcgtctcagaggtcaccagaaggaa
ggctacggtctctcctggaatccaaatctgtccggctctctcctcagtgcgtcagatgac
cataccatttgtctgtgggacatcagtgctgtgcccaaagagggcaagatagtcgaggca
aagacgatcttcaccggtcacactgctgtggtggaggacgtctcctggcacttgcttcac
gagtcgctctttggatctgtagcagatgaccagaagctcatgatctgggacactcgttca
aacaacacctccaaacccagccacgcagtggatgcccacacagcagaggtcaactgtttg
tcattcaacccttacagcgagttcattctggcctctggctctgcagacaagactgtcgct
ctttgggacttgagaaacctgaaattgaagctgcattccttcgagtcacacaaggatgag
attttccaggttcagtggtcaccacataacgagaccatcctggcatccagtggaacagac
cgccgcctcaatgtctgggacctcagtaaaatcggagaggagcagtcaccagaggatgca
gaggacggcccgcctgagcttctgtttatccatggaggccacacagccaagatctccgac
ttctcctggaaccccaacgagccctgggtcatctgctctgtgtctgaagacaacattatg
caagtctggcaaatggctgagaacatctacaacgatgaagacccagagggttcgacagac
cccgaggccacagcgtaa

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