Epinephelus lanceolatus (giant grouper): 117263713
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Entry
117263713 CDS
T07331
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03082
ATP-dependent chromatin remodeling
ely03083
Polycomb repressive complex
ely04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117263713 (rbbp4)
03083 Polycomb repressive complex
117263713 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117263713 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117263713 (rbbp4)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117263713 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
117263713 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
117263713 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117263713 (rbbp4)
PRC2.2
117263713 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117263713 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117263713 (rbbp4)
Chromatin remodeling factors
NuRD complex
117263713 (rbbp4)
NuRF complex
117263713 (rbbp4)
NuRF complex (fruit fly)
117263713 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
117263713
NCBI-ProteinID:
XP_033493211
LinkDB
All DBs
Position
12:complement(43511490..43520816)
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFEASHYDSEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSEVLVFDYTKHPSKPDASGECHPDLRLRGHQKE
GYGLSWNPNLSGSLLSASDDHTICLWDISAVPKEGKIVEAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSTD
PEATA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagcaggagcatttgatgatgcggttgaagagagggtgataaacgag
gagtacaagatctggaagaagaacactcccttcctgtacgacctggtgatgacccacgct
ctggagtggcccagcctgactgctcagtggctgcctgacgtctccaggccggaggggaag
gattacagcgtgcaccggctggtgttgggcactcacacatctgatgagcagaatcacctg
gtcatcgccagcgttcagctgcccaacgatgacgcccagtttgaagcctcacattatgac
agtgagaaaggagagttcggaggctttggctcagtgagcggcaagatcgagatagaaatc
aagatcaaccatgaaggagaggtgaatcgtgctcgctacatgccccaaaacccctgcatc
atcgccaccaagacccccacctcagaggtgctggtgtttgactacaccaaacacccctcc
aagccagatgcttctggagagtgtcaccctgatctgcgtctcagaggtcaccagaaggaa
ggctacggtctctcctggaatccaaatctgtccggctctctcctcagtgcgtcagatgac
cataccatttgtctgtgggacatcagtgctgtgcccaaagagggcaagatagtcgaggca
aagacgatcttcaccggtcacactgctgtggtggaggacgtctcctggcacttgcttcac
gagtcgctctttggatctgtagcagatgaccagaagctcatgatctgggacactcgttca
aacaacacctccaaacccagccacgcagtggatgcccacacagcagaggtcaactgtttg
tcattcaacccttacagcgagttcattctggcctctggctctgcagacaagactgtcgct
ctttgggacttgagaaacctgaaattgaagctgcattccttcgagtcacacaaggatgag
attttccaggttcagtggtcaccacataacgagaccatcctggcatccagtggaacagac
cgccgcctcaatgtctgggacctcagtaaaatcggagaggagcagtcaccagaggatgca
gaggacggcccgcctgagcttctgtttatccatggaggccacacagccaagatctccgac
ttctcctggaaccccaacgagccctgggtcatctgctctgtgtctgaagacaacattatg
caagtctggcaaatggctgagaacatctacaacgatgaagacccagagggttcgacagac
cccgaggccacagcgtaa
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integrated database retrieval system